Ggra9038.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9038.t1
Unique NameGgra9038.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length151
Homology
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BLAST of Ggra9038.t1 vs. uniprot
Match: A0A2V3INJ6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INJ6_9FLOR)

HSP 1 Score: 246 bits (629), Expect = 6.510e-82
Identity = 115/148 (77.70%), Postives = 133/148 (89.86%), Query Frame = 0 
Query:    1 MVKYRASVIVPFARDRVWKLMSDWTNLAKWDINITKSELAASEPVGARGEGTKFDCAFSLQGSEIEVDYTCMKYEEPDICQFVGLAKLFRSQDTIEFESKDDGTKITAEFNLTFRGLLSPFSFVMNGAMQKTGPIVMEDIKKFVTEQL 148
            MVKYRAS++VP+A++RVWKLMSDWTNLAKWDINITKS LA SE  GA GEGTK+DCAFSL GSEI V+Y C+KY+EP  CQF+GLAKLFRSQDT+EFE + +GTK+TAEFNL FRGLL PFSF+MNGAMQKTGPIVM+DI+KFV E+L
Sbjct:    1 MVKYRASIVVPYAQERVWKLMSDWTNLAKWDINITKSVLAESEQPGACGEGTKYDCAFSLNGSEIPVNYNCIKYDEPRTCQFLGLAKLFRSQDTLEFEKEGEGTKLTAEFNLAFRGLLYPFSFLMNGAMQKTGPIVMDDIQKFVDEEL 148
The following BLAST results are available for this feature:
BLAST of Ggra9038.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3INJ66.510e-8277.70Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019587Polyketide cyclase/dehydrasePFAMPF10604Polyketide_cyc2coord: 1..132
e-value: 1.1E-9
score: 38.7
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 4..146
e-value: 1.4E-10
score: 43.1
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 1..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:1388436..1388888 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9038.t1Ggra9038.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 1388436..1388888 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9038.t1 ID=Ggra9038.t1|Name=Ggra9038.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=151bp
MVKYRASVIVPFARDRVWKLMSDWTNLAKWDINITKSELAASEPVGARGE
GTKFDCAFSLQGSEIEVDYTCMKYEEPDICQFVGLAKLFRSQDTIEFESK
DDGTKITAEFNLTFRGLLSPFSFVMNGAMQKTGPIVMEDIKKFVTEQLDE
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019587Polyketide_cyclase/dehydratase
IPR023393START-like_dom_sf