Ggra9037.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9037.t1
Unique NameGgra9037.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length478
Homology
BLAST of Ggra9037.t1 vs. uniprot
Match: A0A2V3INL2 (RuvB-like helicase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INL2_9FLOR)

HSP 1 Score: 827 bits (2136), Expect = 7.230e-301
Identity = 430/465 (92.47%), Postives = 452/465 (97.20%), Query Frame = 0
Query:   15 MERIGAHSHIRGLGLDEQLNPAHIGQGLVGQMEARKAAGLIVRMIQAGKLAGRAILIAGQPGTGKTALAMAMAQALGPDTPFTKITASEVFSLGMSKTEALTQALRRSIGVKIHEETDIIEGEVVELQIDRPLSSQSSEITHSGKLTLKTTEMETVYDLGVKMIKSLQKEKVTSGDVVTIDKATGKITKLGRSFARSRDFDATGSNIRFVQTPDGELQRRKEVVHVVSIHEIDVINSRQQGFLALFSGDTGEIKSEVREQIDIKVAEWREEGKAELVPGVLFIDEVHMLDIECFSFINKAIESDLAPVLIMASNRGITYIRGTKYKAPHGLPLDLLDRLLIISTKPYEAKEVDEILRLRCEEEDIAVSENARALLTRIGTETSLRYAMYLITSSALVCAKRNGTEVDVEDIKRTYALFSDVKRSTQTLAEHQGEFMFSSIENNQ--DANAQSGGDPMQSIVPAQS 477
            MERIGAHSHIRGLGLDEQLNPAHIGQGLVGQ+EARKAAGL+V+MIQ+GKLAGRA+LIAGQPGTGKTALAMAMAQALGPDTPFTKITASEVFSLGMSKTEALTQALRRSIGVKIHEETDIIEGEVVELQIDRPLSSQSSEITHSGKLTLKTTEMETVYDLGVKMIKSLQKEKVTSGDV+TIDKATGKITKLGRSFARSRDFDATGSNIRFVQTPDGELQRRKEVVHVVSIHEIDVINSRQQGFLALFSGDTGEIKSEVREQIDIKVAEWREEGKAELVPGVLFIDEVHMLDIECFSFINKAIESDLAP+LIMASNRGIT IRGTKYKAPHGLPLDLLDRLLI++TKPY  KEVDEILR+RCEEEDIAV+++ARALLTRIG ETSLRYAMYLITSSALVCAKR+GTEVDVEDIKRTYALFSDVKRSTQTLAE  GE+MFS+IE+ Q  D+  Q+  DPMQ++VPA+S
Sbjct:    1 MERIGAHSHIRGLGLDEQLNPAHIGQGLVGQLEARKAAGLLVKMIQSGKLAGRAVLIAGQPGTGKTALAMAMAQALGPDTPFTKITASEVFSLGMSKTEALTQALRRSIGVKIHEETDIIEGEVVELQIDRPLSSQSSEITHSGKLTLKTTEMETVYDLGVKMIKSLQKEKVTSGDVITIDKATGKITKLGRSFARSRDFDATGSNIRFVQTPDGELQRRKEVVHVVSIHEIDVINSRQQGFLALFSGDTGEIKSEVREQIDIKVAEWREEGKAELVPGVLFIDEVHMLDIECFSFINKAIESDLAPILIMASNRGITNIRGTKYKAPHGLPLDLLDRLLIVTTKPYSEKEVDEILRIRCEEEDIAVTKSARALLTRIGMETSLRYAMYLITSSALVCAKRSGTEVDVEDIKRTYALFSDVKRSTQTLAEFHGEYMFSAIEDTQRTDSQQQADSDPMQAVVPAES 465          
BLAST of Ggra9037.t1 vs. uniprot
Match: R7QHR2 (RuvB-like helicase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHR2_CHOCR)

HSP 1 Score: 704 bits (1816), Expect = 1.190e-251
Identity = 359/451 (79.60%), Postives = 409/451 (90.69%), Query Frame = 0
Query:    5 RFEETVKRPGMERIGAHSHIRGLGLDEQLNPAHIGQGLVGQMEARKAAGLIVRMIQAGKLAGRAILIAGQPGTGKTALAMAMAQALGPDTPFTKITASEVFSLGMSKTEALTQALRRSIGVKIHEETDIIEGEVVELQIDRPLS-SQSSEITHSGKLTLKTTEMETVYDLGVKMIKSLQKEKVTSGDVVTIDKATGKITKLGRSFARSRDFDATGSNIRFVQTPDGELQRRKEVVHVVSIHEIDVINSRQQGFLALFSGDTGEIKSEVREQIDIKVAEWREEGKAELVPGVLFIDEVHMLDIECFSFINKAIESDLAPVLIMASNRGITYIRGTKYKAPHGLPLDLLDRLLIISTKPYEAKEVDEILRLRCEEEDIAVSENARALLTRIGTETSLRYAMYLITSSALVCAKRNGTEVDVEDIKRTYALFSDVKRSTQTLAEHQGEFMFSSI 454
            RF+E V+R  MERIGAHSHIRGLGLDE LN A   QGLVGQ+EARKAAG+IVR+I+ GK+AGRA+LIAGQPGTGKTA+AM MAQALG +TPFTK+ ASE+FSL MSKTEALTQALR+SIGV+I EET++IEGEVVE+QID PL+ S ++ +  SGKLTLKTTEMETVYDLG KMI SLQKEKVT+GDV+TIDKATGKI+KLGRSFARSRD+DA GS  RFVQ PDGELQRRKEVVHVVS+HEIDVINSRQQGFLALF+GDTGEIK+EVREQID+KVAEWREEGKAE+VPGVLFIDEVHMLDIECFSFIN+A+ES+LAPVL++ASNRGIT IRGT YK+PHGLPLDLLDRLLII+TKPY  K++ +IL+LRCEEED+ ++EN   LLTRIG ETSLRYAMYLITSSALVC+KR GTEVDVEDIKRTY LFSDVKRSTQ L++ Q E+MF+ +
Sbjct:    7 RFQEGVERTRMERIGAHSHIRGLGLDENLNAAPSAQGLVGQLEARKAAGVIVRIIEQGKIAGRAVLIAGQPGTGKTAIAMGMAQALGSETPFTKMAASEIFSLEMSKTEALTQALRKSIGVRIKEETELIEGEVVEIQIDMPLTRSSAAGMAKSGKLTLKTTEMETVYDLGTKMIDSLQKEKVTNGDVITIDKATGKISKLGRSFARSRDYDAMGSTTRFVQCPDGELQRRKEVVHVVSLHEIDVINSRQQGFLALFAGDTGEIKAEVREQIDVKVAEWREEGKAEIVPGVLFIDEVHMLDIECFSFINRALESELAPVLVVASNRGITRIRGTTYKSPHGLPLDLLDRLLIITTKPYNEKDIRQILQLRCEEEDVEITENGLNLLTRIGLETSLRYAMYLITSSALVCSKRKGTEVDVEDIKRTYTLFSDVKRSTQALSDFQDEYMFNDV 457          
BLAST of Ggra9037.t1 vs. uniprot
Match: A0A7S1XG71 (RuvB-like helicase n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XG71_9RHOD)

HSP 1 Score: 663 bits (1711), Expect = 6.670e-236
Identity = 340/469 (72.49%), Postives = 402/469 (85.71%), Query Frame = 0
Query:    5 RFEETVKRPGMERIGAHSHIRGLGLDEQLN--PAHIGQGLVGQMEARKAAGLIVRMIQAGKLAGRAILIAGQPGTGKTALAMAMAQALGPDTPFTKITASEVFSLGMSKTEALTQALRRSIGVKIHEETDIIEGEVVELQIDRPLSSQSSEITHSGKLTLKTTEMETVYDLGVKMIKSLQKEKVTSGDVVTIDKATGKITKLGRSFARSRDFDATGSNIRFVQTPDGELQRRKEVVHVVSIHEIDVINSRQQGFLALFSGDTGEIKSEVREQIDIKVAEWREEGKAELVPGVLFIDEVHMLDIECFSFINKAIESDLAPVLIMASNRGITYIRGTKYKAPHGLPLDLLDRLLIISTKPYEAKEVDEILRLRCEEEDIAVSENARALLTRIGTETSLRYAMYLITSSALVCAKRNGTEVDVEDIKRTYALFSDVKRSTQTLAEHQGEFMFSSIENNQDANAQSGGDPMQS 471
            R E T+ R  MERIGAHSHIRGLGLDE+L    A  GQGLVGQ  AR+AAG+IVRM+Q GK+AGRA+LIAGQPGTGKTA+AMAMAQ+LG +TPFTK+T SE++SL MSKTEALTQA RRSIGV+I EET+IIEGEVVE+QID PL S S+ ++ SGK+T+KTT+METVYDLG KMI++L KEKVTSGDV+ IDKATGKI+KLGRSFARSRD+DA GS+ RFVQ P+GELQRRK+VVHVV++HEIDVINSRQQGFLALF+GDTGEIKSEVREQID KVAEWREEGKAE++PGVLFIDEVHMLD+ECFSFIN+A+E DLAP+LIMASNRGIT IRGT Y++PHG+PLDLLDRLLII T+PY   E  +IL +R  EED+ V++ A   LTRI  +TSLRYAMYL+TS+ALVC+KR    VDVED+KR+YALF DVKRSTQ L E Q +F+F+ +E N+    ++ GD M+S
Sbjct:   16 REERTLAR--MERIGAHSHIRGLGLDEELRVTDAGGGQGLVGQERARRAAGVIVRMVQEGKIAGRAVLIAGQPGTGKTAIAMAMAQSLGDETPFTKLTGSEIYSLEMSKTEALTQAFRRSIGVRIREETEIIEGEVVEIQIDNPLGSTSASMSKSGKITMKTTDMETVYDLGTKMIEALSKEKVTSGDVIMIDKATGKISKLGRSFARSRDYDAMGSSTRFVQCPEGELQRRKDVVHVVTLHEIDVINSRQQGFLALFAGDTGEIKSEVREQIDTKVAEWREEGKAEIIPGVLFIDEVHMLDVECFSFINRALEHDLAPILIMASNRGITRIRGTNYRSPHGIPLDLLDRLLIIGTQPYSLGETRKILEIRTIEEDVQVTDPALEFLTRIAMDTSLRYAMYLMTSAALVCSKRRAPSVDVEDVKRSYALFVDVKRSTQILHEFQSDFLFNEVEINEGVENEANGDEMES 482          
BLAST of Ggra9037.t1 vs. uniprot
Match: A0A8J6CGY0 (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CGY0_DIALT)

HSP 1 Score: 656 bits (1693), Expect = 2.270e-233
Identity = 331/441 (75.06%), Postives = 390/441 (88.44%), Query Frame = 0
Query:   15 MERIGAHSHIRGLGLDEQLNPAHIGQGLVGQMEARKAAGLIVRMIQAGKLAGRAILIAGQPGTGKTALAMAMAQALGPDTPFTKITASEVFSLGMSKTEALTQALRRSIGVKIHEETDIIEGEVVELQIDRPLSSQSSEITHSGKLTLKTTEMETVYDLGVKMIKSLQKEKVTSGDVVTIDKATGKITKLGRSFARSRDFDATGSNIRFVQTPDGELQRRKEVVHVVSIHEIDVINSRQQGFLALFSGDTGEIKSEVREQIDIKVAEWREEGKAELVPGVLFIDEVHMLDIECFSFINKAIESDLAPVLIMASNRGITYIRGTKYKAPHGLPLDLLDRLLIISTKPYEAKEVDEILRLRCEEEDIAVSENARALLTRIGTETSLRYAMYLITSSALVCAKRNGTEVDVEDIKRTYALFSDVKRSTQTLAEHQGEFMFSSIE 455
            +ERIGAHSHIRGLGLD+ L    + QG+VGQ  ARKAAG+I++MI+ GK+AGRA+LIAGQPGTGKTA+AM MAQALG DTPFT I ASE+FSL M+KTEALTQA RRSIGV+I EET+IIEGEVVE++IDRP +  ++    +GKLTLKTTEMETVYDLG KMI SL KEKV SGDV+TIDKATG+I+ LGRSFARSRD+DA G++ +FVQ P+GELQ+RKEVVHVVS+HE+DVINSR QGFLALFSGDTGEIKSEVREQID KVAEWREEGKAE+VPGVLFIDEVHMLDIECFSF+N+A+ESDLAPVL++A+NRGIT IRGT YK+PHG+P+DLLDRLLIIST PY  KEV +ILR+RCEEED+ ++++A ALLT++G ETSLRYA+++I +SALVCAKR GT+VDVEDIKR Y LF DVKRSTQ L E+Q EFMF+ I+
Sbjct:   18 IERIGAHSHIRGLGLDDALEARLVSQGMVGQANARKAAGVILQMIRDGKIAGRAVLIAGQPGTGKTAIAMGMAQALGADTPFTTIAASEIFSLEMNKTEALTQAFRRSIGVRIKEETEIIEGEVVEIEIDRPAAGAAATAGKTGKLTLKTTEMETVYDLGQKMIDSLTKEKVQSGDVITIDKATGRISVLGRSFARSRDYDAMGASTKFVQCPEGELQKRKEVVHVVSLHEVDVINSRTQGFLALFSGDTGEIKSEVREQIDQKVAEWREEGKAEIVPGVLFIDEVHMLDIECFSFLNRALESDLAPVLVVATNRGITRIRGTNYKSPHGIPIDLLDRLLIISTTPYSDKEVKQILRIRCEEEDVEMTDDALALLTKVGMETSLRYAIHMIIASALVCAKRKGTQVDVEDIKRVYTLFVDVKRSTQFLQEYQSEFMFNEIQ 458          
BLAST of Ggra9037.t1 vs. uniprot
Match: A0A7S3A5N8 (RuvB-like helicase n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A5N8_9RHOD)

HSP 1 Score: 652 bits (1681), Expect = 1.460e-231
Identity = 329/461 (71.37%), Postives = 395/461 (85.68%), Query Frame = 0
Query:    2 LNSRFEETVKRPGMERIGAHSHIRGLGLDEQLNPAHIGQGLVGQMEARKAAGLIVRMIQAGKLAGRAILIAGQPGTGKTALAMAMAQALGPDTPFTKITASEVFSLGMSKTEALTQALRRSIGVKIHEETDIIEGEVVELQIDRPLSSQSSEITHSGKLTLKTTEMETVYDLGVKMIKSLQKEKVTSGDVVTIDKATGKITKLGRSFARSRDFDATGSNIRFVQTPDGELQRRKEVVHVVSIHEIDVINSRQQGFLALFSGDTGEIKSEVREQIDIKVAEWREEGKAELVPGVLFIDEVHMLDIECFSFINKAIESDLAPVLIMASNRGITYIRGTKYKAPHGLPLDLLDRLLIISTKPYEAKEVDEILRLRCEEEDIAVSENARALLTRIGTETSLRYAMYLITSSALVCAKRNGTEVDVEDIKRTYALFSDVKRSTQTLAEHQGEFMFSSIENNQDANA 462
            +NS  +   +   MERIGAHSH+RGLGLD+ L  +   QGLVGQ +ARKAAGLIVRMI+ GK+AGRA+LIAGQPGTGKTA+AM M+Q+LG DTPFTK+T SE+FSL MSKTEALTQALRRSIGV+I EET+I+EGEVVE+QID+PL +  S+   + KLTLKTT+METVYDLG KMI+S+ +EKVTSGDV+ IDKATGK+TKLGRSFARSRD+DA   + RFVQ P+GELQ+RKEV HVVS+HEIDVINSRQQGFLALF+GDTGEIKSE+R+QID KV EWREEGKAE VPGVLFIDEVHMLDIECFSF+N+A+ES LAPVL++ASNRGIT IRGT Y++PHG+PLDLLDRLLII TKPY   E+ EIL +RCEEED+ ++E+   LLT+IG ETSLRYA+Y+IT++AL C KR  T+VD+EDIKRTYALF DV RSTQ L E+Q ++MF+ I +++D +A
Sbjct:    8 VNSAGQRERELSRMERIGAHSHVRGLGLDDALEASEKAQGLVGQAKARKAAGLIVRMIKEGKIAGRAVLIAGQPGTGKTAIAMGMSQSLGDDTPFTKLTGSELFSLEMSKTEALTQALRRSIGVRIKEETEILEGEVVEIQIDKPLGTNESK---TAKLTLKTTDMETVYDLGAKMIESMSREKVTSGDVIVIDKATGKVTKLGRSFARSRDYDAMSGSTRFVQCPEGELQKRKEVTHVVSLHEIDVINSRQQGFLALFAGDTGEIKSEIRDQIDTKVTEWREEGKAEFVPGVLFIDEVHMLDIECFSFLNRALESTLAPVLVIASNRGITRIRGTNYRSPHGIPLDLLDRLLIIHTKPYTEAEIREILAIRCEEEDVQMTEDGEKLLTKIGVETSLRYAIYMITAAALCCTKRKATKVDIEDIKRTYALFIDVGRSTQFLREYQRDYMFNEIGDDKDDDA 465          
BLAST of Ggra9037.t1 vs. uniprot
Match: RUVB2 (RuvB-like 2 n=19 Tax=Euteleostomi TaxID=117571 RepID=RUVB2_XENLA)

HSP 1 Score: 644 bits (1660), Expect = 1.830e-228
Identity = 322/443 (72.69%), Postives = 384/443 (86.68%), Query Frame = 0
Query:   15 MERIGAHSHIRGLGLDEQLNPAHIGQGLVGQMEARKAAGLIVRMIQAGKLAGRAILIAGQPGTGKTALAMAMAQALGPDTPFTKITASEVFSLGMSKTEALTQALRRSIGVKIHEETDIIEGEVVELQIDRPLSSQSSEITHSGKLTLKTTEMETVYDLGVKMIKSLQKEKVTSGDVVTIDKATGKITKLGRSFARSRDFDATGSNIRFVQTPDGELQRRKEVVHVVSIHEIDVINSRQQGFLALFSGDTGEIKSEVREQIDIKVAEWREEGKAELVPGVLFIDEVHMLDIECFSFINKAIESDLAPVLIMASNRGITYIRGTKYKAPHGLPLDLLDRLLIISTKPYEAKEVDEILRLRCEEEDIAVSENARALLTRIGTETSLRYAMYLITSSALVCAKRNGTEVDVEDIKRTYALFSDVKRSTQTLAEHQGEFMFSSIENN 457
            +ERIGAHSHIRGLGLD+ L P  + QG+VGQ+ +R+AAG+I+ MI+ GK+AGRA+LIAGQPGTGKTA+AM MAQALG DTPFT I  SE+FSL MSKTEALTQA RRSIGV+I EET+IIEGEVVE+QIDRP +   +++   GKLTLKTTEMET+YDLG KMI+SL KEKV +GDV+TIDKATGKITKLGR+F R+RD+DA GS  +FVQ PDGELQ+RKEVVH VS+HEIDVINSR QGFLALFSGDTGEIKSEVREQI+ KVAEWREEGKAE++PGVLFIDEVHMLDIECFSF+N+A+ESD+APVLIMA+NRGIT IRGT Y++PHG+P+DLLDRLLIIST PY  KE  +IL++RCEEED+ +SE+A  +LTRIG ETSLRY+M LIT+++LVC KR GTEV V+DIKR Y+LF D  RSTQ + E+Q  FMF+ ++ +
Sbjct:   18 IERIGAHSHIRGLGLDDALEPRQVSQGMVGQLASRRAAGVILEMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAQALGSDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIKEETEIIEGEVVEVQIDRPATGTGAKV---GKLTLKTTEMETIYDLGTKMIESLTKEKVQAGDVITIDKATGKITKLGRAFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHEIDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIECFSFLNRALESDMAPVLIMATNRGITRIRGTNYQSPHGIPIDLLDRLLIISTSPYNEKETKQILKIRCEEEDVDMSEDAYTVLTRIGLETSLRYSMQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMKEYQDAFMFNEMKTD 457          
BLAST of Ggra9037.t1 vs. uniprot
Match: A0A0M0K8F1 (RuvB-like helicase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K8F1_9EUKA)

HSP 1 Score: 644 bits (1660), Expect = 2.200e-228
Identity = 324/442 (73.30%), Postives = 381/442 (86.20%), Query Frame = 0
Query:   15 MERIGAHSHIRGLGLDEQLNPAHIGQGLVGQMEARKAAGLIVRMIQAGKLAGRAILIAGQPGTGKTALAMAMAQALGPDTPFTKITASEVFSLGMSKTEALTQALRRSIGVKIHEETDIIEGEVVELQIDRPLSSQSSEITHSGKLTLKTTEMETVYDLGVKMIKSLQKEKVTSGDVVTIDKATGKITKLGRSFARSRDFDATGSNIRFVQTPDGELQRRKEVVHVVSIHEIDVINSRQQGFLALFSGDTGEIKSEVREQIDIKVAEWREEGKAELVPGVLFIDEVHMLDIECFSFINKAIESDLAPVLIMASNRGITYIRGTKYKAPHGLPLDLLDRLLIISTKPYEAKEVDEILRLRCEEEDIAVSENARALLTRIGTETSLRYAMYLITSSALVCAKRNGTEVDVEDIKRTYALFSDVKRSTQTLAEHQGEFMFSSIEN 456
            +ERIGAHSHIRGLGLD+ L    + QG+VGQ  ARKAAG+I+ MI+ G++AGRAILIAGQPGTGKTA+AM MAQALG DTPFT I ASE+FSL M+KTEALTQA RRSIGV+I EET+IIEGEVVE++IDRP +  S     +GKLTLKTTEMETVYDLG KMI SL KEK  +GDV+TIDKATG+I  LGRSF RSRD+DA G N +FVQTP+GELQ+RKEVVHVVS+HEIDVINSRQQGFLALF+GDTGEIK+EVR+QID KVAEWREEGKAE+VPGVLFIDEVHMLDIECFS++N+A+ESDLAPVL++A+NRGIT IRGT YK+PHG+P+DLLDRLLIIST PY  KE+  IL++RCEEED+ + ++A  LLT+IG ETSLRYA+ LI ++ALVCAKR G EV+VED+K+ Y LF DVKRSTQ L E+Q EFMF  I++
Sbjct:   16 IERIGAHSHIRGLGLDDSLEARAVSQGMVGQATARKAAGVILSMIREGQIAGRAILIAGQPGTGKTAIAMGMAQALGTDTPFTTIAASEIFSLEMNKTEALTQAFRRSIGVRIKEETEIIEGEVVEIEIDRPAAGSSKGAAKTGKLTLKTTEMETVYDLGQKMIDSLTKEKAQAGDVITIDKATGRIAVLGRSFTRSRDYDAMGPNTKFVQTPEGELQKRKEVVHVVSLHEIDVINSRQQGFLALFAGDTGEIKAEVRDQIDQKVAEWREEGKAEIVPGVLFIDEVHMLDIECFSYLNRALESDLAPVLVVATNRGITRIRGTNYKSPHGIPIDLLDRLLIISTVPYTEKEIKHILKIRCEEEDVEMGDDALTLLTKIGIETSLRYAIQLIIAAALVCAKRKGVEVEVEDVKKVYTLFVDVKRSTQFLIEYQSEFMFHEIQD 457          
BLAST of Ggra9037.t1 vs. uniprot
Match: A0A4X2L7S0 (RuvB-like helicase n=55 Tax=Gnathostomata TaxID=7776 RepID=A0A4X2L7S0_VOMUR)

HSP 1 Score: 642 bits (1656), Expect = 7.710e-228
Identity = 321/441 (72.79%), Postives = 383/441 (86.85%), Query Frame = 0
Query:   15 MERIGAHSHIRGLGLDEQLNPAHIGQGLVGQMEARKAAGLIVRMIQAGKLAGRAILIAGQPGTGKTALAMAMAQALGPDTPFTKITASEVFSLGMSKTEALTQALRRSIGVKIHEETDIIEGEVVELQIDRPLSSQSSEITHSGKLTLKTTEMETVYDLGVKMIKSLQKEKVTSGDVVTIDKATGKITKLGRSFARSRDFDATGSNIRFVQTPDGELQRRKEVVHVVSIHEIDVINSRQQGFLALFSGDTGEIKSEVREQIDIKVAEWREEGKAELVPGVLFIDEVHMLDIECFSFINKAIESDLAPVLIMASNRGITYIRGTKYKAPHGLPLDLLDRLLIISTKPYEAKEVDEILRLRCEEEDIAVSENARALLTRIGTETSLRYAMYLITSSALVCAKRNGTEVDVEDIKRTYALFSDVKRSTQTLAEHQGEFMFSSIE 455
            +ERIGAHSHIRGLGLD+ L P  + QG+VGQ+ AR+AAG+++ MI+ GK+AGRA+LIAGQPGTGKTA+AM MAQALGPDTPFT I  SE+FSL MSKTEALTQA RRSIGV+I EET+IIEGEVVE+QIDRP +   S++   GKLTLKTTEMET+YDLG KMI+SL KEKV +GDV+TIDKATGKI+KLGRSF R+RD+DA GS  +FVQ PDGELQ+RKEVVH VS+HEIDVINSR QGFLALFSGDTGEIKSEVREQI+ KVAEWREEGKAE++PGVLFIDEVHMLDIE FSF+N+A+ESD+APVLIMA+NRGIT IRGT Y++PHG+P+DLLDRLLI+ST PY  K+  +ILR+RCEEED+ +SE+A  +LTRIG ETSLRYA+ LIT+++LVC KR GTEV V+DIKR Y+LF D  RSTQ + E+Q  F+F+ ++
Sbjct:   19 IERIGAHSHIRGLGLDDALEPRQVSQGMVGQLAARRAAGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIKEETEIIEGEVVEIQIDRPATGTGSKV---GKLTLKTTEMETIYDLGTKMIESLTKEKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHEIDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTGYQSPHGIPIDLLDRLLIVSTAPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMKEYQDAFLFNELK 456          
BLAST of Ggra9037.t1 vs. uniprot
Match: RUVB2 (RuvB-like 2 n=233 Tax=Tetrapoda TaxID=32523 RepID=RUVB2_HUMAN)

HSP 1 Score: 640 bits (1651), Expect = 4.440e-227
Identity = 320/441 (72.56%), Postives = 382/441 (86.62%), Query Frame = 0
Query:   15 MERIGAHSHIRGLGLDEQLNPAHIGQGLVGQMEARKAAGLIVRMIQAGKLAGRAILIAGQPGTGKTALAMAMAQALGPDTPFTKITASEVFSLGMSKTEALTQALRRSIGVKIHEETDIIEGEVVELQIDRPLSSQSSEITHSGKLTLKTTEMETVYDLGVKMIKSLQKEKVTSGDVVTIDKATGKITKLGRSFARSRDFDATGSNIRFVQTPDGELQRRKEVVHVVSIHEIDVINSRQQGFLALFSGDTGEIKSEVREQIDIKVAEWREEGKAELVPGVLFIDEVHMLDIECFSFINKAIESDLAPVLIMASNRGITYIRGTKYKAPHGLPLDLLDRLLIISTKPYEAKEVDEILRLRCEEEDIAVSENARALLTRIGTETSLRYAMYLITSSALVCAKRNGTEVDVEDIKRTYALFSDVKRSTQTLAEHQGEFMFSSIE 455
            +ERIGAHSHIRGLGLD+ L P    QG+VGQ+ AR+AAG+++ MI+ GK+AGRA+LIAGQPGTGKTA+AM MAQALGPDTPFT I  SE+FSL MSKTEALTQA RRSIGV+I EET+IIEGEVVE+QIDRP +   S++   GKLTLKTTEMET+YDLG KMI+SL K+KV +GDV+TIDKATGKI+KLGRSF R+RD+DA GS  +FVQ PDGELQ+RKEVVH VS+HEIDVINSR QGFLALFSGDTGEIKSEVREQI+ KVAEWREEGKAE++PGVLFIDEVHMLDIE FSF+N+A+ESD+APVLIMA+NRGIT IRGT Y++PHG+P+DLLDRLLI+ST PY  K+  +ILR+RCEEED+ +SE+A  +LTRIG ETSLRYA+ LIT+++LVC KR GTEV V+DIKR Y+LF D  RSTQ + E+Q  F+F+ ++
Sbjct:   19 IERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIKEETEIIEGEVVEIQIDRPATGTGSKV---GKLTLKTTEMETIYDLGTKMIESLTKDKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHEIDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMKEYQDAFLFNELK 456          
BLAST of Ggra9037.t1 vs. uniprot
Match: H3BEP4 (RuvB-like helicase n=15 Tax=Gnathostomata TaxID=7776 RepID=H3BEP4_LATCH)

HSP 1 Score: 640 bits (1651), Expect = 4.950e-227
Identity = 321/443 (72.46%), Postives = 382/443 (86.23%), Query Frame = 0
Query:   15 MERIGAHSHIRGLGLDEQLNPAHIGQGLVGQMEARKAAGLIVRMIQAGKLAGRAILIAGQPGTGKTALAMAMAQALGPDTPFTKITASEVFSLGMSKTEALTQALRRSIGVKIHEETDIIEGEVVELQIDRPLSSQSSEITHSGKLTLKTTEMETVYDLGVKMIKSLQKEKVTSGDVVTIDKATGKITKLGRSFARSRDFDATGSNIRFVQTPDGELQRRKEVVHVVSIHEIDVINSRQQGFLALFSGDTGEIKSEVREQIDIKVAEWREEGKAELVPGVLFIDEVHMLDIECFSFINKAIESDLAPVLIMASNRGITYIRGTKYKAPHGLPLDLLDRLLIISTKPYEAKEVDEILRLRCEEEDIAVSENARALLTRIGTETSLRYAMYLITSSALVCAKRNGTEVDVEDIKRTYALFSDVKRSTQTLAEHQGEFMFSSIENN 457
            +ERIGAHSHIRGLGLD+ L P  + QG+VGQ+  R+AAG+I+ MI+ GK+AGRA+LIAGQPGTGKTA+AM MAQALG DTPFT I  SE+FSL MSKTEALTQA RRSIGV+I EET+IIEGEVVE+QIDRP +   +++   GKLTLKTTEMETVYDLG KMI+SL KEKV +GDV+TIDKATGKI+KLGRSF R+RD+DA G+  +FVQ PDGELQ+RKEVVH VS+HEIDVINSR QGFLALFSGDTGEIKSEVREQI+ KVAEWREEGKAE++PGVLFIDEVHMLDIECFSF+N+A+ESD+APVLIMA+NRGIT IRGT Y++PHG+P+DLLDRLLIIST PY  KE  +IL++RCEEED+ +SE+A  +LTRIG ETSLRYA+ LIT++ LVC K+ GTEV V+DIKR Y+LF D  RSTQ + E+Q  FMF+ ++ +
Sbjct:   22 IERIGAHSHIRGLGLDDALEPRQVSQGMVGQLAPRRAAGVILEMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAQALGQDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIKEETEIIEGEVVEIQIDRPATGTGTKV---GKLTLKTTEMETVYDLGTKMIESLSKEKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGAQTKFVQCPDGELQKRKEVVHTVSVHEIDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIECFSFLNRALESDMAPVLIMATNRGITRIRGTNYQSPHGIPIDLLDRLLIISTTPYNEKETKQILKIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAANLVCRKKKGTEVQVDDIKRVYSLFLDESRSTQYMKEYQDAFMFNEMKGD 461          
The following BLAST results are available for this feature:
BLAST of Ggra9037.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3INL27.230e-30192.47RuvB-like helicase n=1 Tax=Gracilariopsis chorda T... [more]
R7QHR21.190e-25179.60RuvB-like helicase n=1 Tax=Chondrus crispus TaxID=... [more]
A0A7S1XG716.670e-23672.49RuvB-like helicase n=1 Tax=Compsopogon caeruleus T... [more]
A0A8J6CGY02.270e-23375.06Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A7S3A5N81.460e-23171.37RuvB-like helicase n=2 Tax=Rhodosorus marinus TaxI... [more]
RUVB21.830e-22872.69RuvB-like 2 n=19 Tax=Euteleostomi TaxID=117571 Rep... [more]
A0A0M0K8F12.200e-22873.30RuvB-like helicase n=1 Tax=Chrysochromulina tobini... [more]
A0A4X2L7S07.710e-22872.79RuvB-like helicase n=55 Tax=Gnathostomata TaxID=77... [more]
RUVB24.440e-22772.56RuvB-like 2 n=233 Tax=Tetrapoda TaxID=32523 RepID=... [more]
H3BEP44.950e-22772.46RuvB-like helicase n=15 Tax=Gnathostomata TaxID=77... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 65..360
e-value: 8.6E-10
score: 48.5
IPR010339TIP49, P-loop domainPFAMPF06068TIP49coord: 17..363
e-value: 1.5E-153
score: 511.1
NoneNo IPR availableGENE3D1.10.8.60coord: 363..462
e-value: 3.8E-34
score: 118.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 456..477
IPR042487RuvBL1/2, DNA/RNA binding domainGENE3D2.40.50.360coord: 122..247
e-value: 3.0E-122
score: 410.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 16..358
e-value: 3.0E-122
score: 410.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 40..429
IPR041048RuvB-like, AAA-lid domainPFAMPF17856TIP49_Ccoord: 369..434
e-value: 9.7E-23
score: 80.1
IPR027238RuvB-likePANTHERPTHR11093RUVB-RELATED REPTIN AND PONTINcoord: 6..456
IPR037942RuvB-like helicase 2PANTHERPTHR11093:SF2RUVB-LIKE 2coord: 6..456

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:1386369..1387802 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9037.t1Ggra9037.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 1386369..1387802 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9037.t1 ID=Ggra9037.t1|Name=Ggra9037.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=478bp
MLNSRFEETVKRPGMERIGAHSHIRGLGLDEQLNPAHIGQGLVGQMEARK
AAGLIVRMIQAGKLAGRAILIAGQPGTGKTALAMAMAQALGPDTPFTKIT
ASEVFSLGMSKTEALTQALRRSIGVKIHEETDIIEGEVVELQIDRPLSSQ
SSEITHSGKLTLKTTEMETVYDLGVKMIKSLQKEKVTSGDVVTIDKATGK
ITKLGRSFARSRDFDATGSNIRFVQTPDGELQRRKEVVHVVSIHEIDVIN
SRQQGFLALFSGDTGEIKSEVREQIDIKVAEWREEGKAELVPGVLFIDEV
HMLDIECFSFINKAIESDLAPVLIMASNRGITYIRGTKYKAPHGLPLDLL
DRLLIISTKPYEAKEVDEILRLRCEEEDIAVSENARALLTRIGTETSLRY
AMYLITSSALVCAKRNGTEVDVEDIKRTYALFSDVKRSTQTLAEHQGEFM
FSSIENNQDANAQSGGDPMQSIVPAQS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR010339TIP49_P-loop
IPR042487RuvBL1/2_DNA/RNA_bd_dom
IPR027417P-loop_NTPase
IPR041048RuvB-like_C
IPR027238RuvB-like
IPR037942RUVBL2