Ggra9019.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9019.t1
Unique NameGgra9019.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length303
Homology
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BLAST of Ggra9019.t1 vs. uniprot
Match: A0A2V3INL9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INL9_9FLOR)

HSP 1 Score: 235 bits (599), Expect = 6.100e-74
Identity = 116/215 (53.95%), Postives = 151/215 (70.23%), Query Frame = 0 
Query:   88 MPPPVLIAAAVCTPKLVAGALFRDDVAGVVDVGAGDGHPITYTALKRDAKWVLSFEESAQYDRLRRLSGAEFHHVRARPGNGAQHPTILQALQTANLTADAHNRHDPSARMYGTISLLSIKLSRPHPVVQGASALLPSVQNVLLRVDVEDHAEESLQVLFQSGFECAHLAFSDKRKSHPFFGRNSINFGSLSSFLRFVAKHGGAVDVLCSRRAST 302
            MPP VL+AAAVC+ K+   ALFR  V GV+DVGA DG+P+T  AL R+AKWVLS E S +Y+RLRRLSG  FHH+   PGN  ++P+I+  L TAN+T DA +    +    GTISL++I+       ++GA  +LP+V NVLL +  + +A  +L +LF +GFECAHLAF+ K K HPFFGRNSIN  S   FL+F+AKH   VDVLCS+RA+T
Sbjct:    1 MPPTVLVAAAVCSRKIAVEALFRGQVTGVIDVGAADGYPVTSLALSREAKWVLSCENSPKYNRLRRLSGPGFHHINLLPGNSRRNPSIIHVLHTANITGDAGDVRKKTFISRGTISLIAIRGKESDAFLEGAVPILPAVNNVLLEISADRNASSALHILFNAGFECAHLAFNHKGKVHPFFGRNSINAESAGQFLQFMAKHAKFVDVLCSKRATT 215
The following BLAST results are available for this feature:
BLAST of Ggra9019.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3INL96.100e-7453.95Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..302
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availableTMHMMTMhelixcoord: 13..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:1167595..1168503 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9019.t1Ggra9019.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 1167595..1168503 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9019.t1 ID=Ggra9019.t1|Name=Ggra9019.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=303bp
MRSLKPRQYNTRVLLLLLLATPTLYVLLLTNPPESSNAFLPTTRPHLTTF
LSHLHPSVTSLHRLASVKPSLREDALNLALSAWRHSRMPPPVLIAAAVCT
PKLVAGALFRDDVAGVVDVGAGDGHPITYTALKRDAKWVLSFEESAQYDR
LRRLSGAEFHHVRARPGNGAQHPTILQALQTANLTADAHNRHDPSARMYG
TISLLSIKLSRPHPVVQGASALLPSVQNVLLRVDVEDHAEESLQVLFQSG
FECAHLAFSDKRKSHPFFGRNSINFGSLSSFLRFVAKHGGAVDVLCSRRA
ST*
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