Ggra9007.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra9007.t1 vs. uniprot
Match: A0A2V3IEA3 (RNA pseudouridylate synthase domain-containing protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEA3_9FLOR) HSP 1 Score: 228 bits (582), Expect = 5.530e-70 Identity = 134/270 (49.63%), Postives = 172/270 (63.70%), Query Frame = 0
Query: 6 KLAPRQRDDDCAGGGARKA-----PRTATLQVLLYQRGRYVAVCKPPDVRIDGDFKLTVAKLVQHFLQRRHEQPQFCTPYFVHRLDYATSGALLMALSRRAAAFAAKQFETRLVEKSYVALVHGHVSPTIGGVSARIASMG-ADFRMKLSACGRSARTGVRVLSHGTFQGRKVSKLELRPESGRRHQLRLHCALLGAPIVGDATYGACHEAQLF--ERAPERMMLHASTLRVRLPPEQRPLPSRARLRRGDVFDDA---PVAQLRTDDPL 264
+LAPR+ + D P L+VLL+ RY+AVCKP DVRIDGDF+ TV KL +L++ Q FVHRLDYATSG +L+ALSR AAA ++QFE+RLV+KSYVA+VHG + V AR+A +DF ++++ GR + T VL +GTF G KVSK+ L P SGRRHQLR+HCAL+G IVGDATY + + F AP+RMMLHA+ L VRLPP+ LPSR RLR V D + P+ +L+ DPL
Sbjct: 4 RLAPREDEHDXXXXXXXXXXXXXPPVAPQLRVLLHHPARYLAVCKPADVRIDGDFRHTVLKLAHAYLRQSRRGDQLAQVRFVHRLDYATSGVMLLALSRPAAAAVSRQFESRLVQKSYVAIVHGAILRRQFSVHARVADRDKSDFLVRVAPQGRDSFTEGVVLEYGTFNGMKVSKVLLMPRSGRRHQLRVHCALMGHAIVGDATYASSSQHCRFAARNAPKRMMLHAAALEVRLPPQADELPSRRRLRGERVRDISRRWPLHRLQAPDPL 273
BLAST of Ggra9007.t1 vs. uniprot
Match: A0A7S3EEX3 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EEX3_9RHOD) HSP 1 Score: 172 bits (435), Expect = 2.100e-48 Identity = 106/234 (45.30%), Postives = 139/234 (59.40%), Query Frame = 0
Query: 5 VKLAPRQRDDDCAGGGARKAPRTATLQVLLYQRGRYVAVCKPPDVRIDGDFKLTVAKLVQ-HFLQRRHEQPQFCTPYFVHRLDYATSGALLMALSRRAAAFAAKQFETRLVEKSYVALVHGHVSPTIGGVSARIASM-GADFRMKLSAC---GRSARTGVRVLSHGTFQGRKVSKLELRPESGRRHQLRLHCALLGAPIVGDATYGACHEAQLFE-RAPERMMLHASTLRVRLP 232
V APR+++ D RK PR+ + V+ G YV V KP DVR+DG+F +TV KLV+ H ++ + FVH+LDYATSG LL+AL+RR+AAF KQFE R V+K Y+ALV+G + P IA+ G DFRM + GRSA T + +G + G++V+K+ L P SGRRHQLR+H G PIVGDATY E + P RM LHA L + LP
Sbjct: 8 VAQAPRKKEGDEVTTRGRKPPRSPEIDVIYEDEG-YVVVNKPADVRMDGEFDVTVEKLVRAHLTKKDATWEKEGKIRFVHQLDYATSGVLLLALTRRSAAFTCKQFERRTVQKKYLALVYGTIPPGTYKYDENIANQPGIDFRMTVGTSANPGRSALTYCTPVGYGEYLGKRVTKVLLEPSSGRRHQLRVHLLTAGFPIVGDATYALDSELGPDDPNTPPRMFLHAWNLLIVLP 240
BLAST of Ggra9007.t1 vs. uniprot
Match: S0F336 (PseudoU_synth_2 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F336_CHOCR) HSP 1 Score: 169 bits (429), Expect = 3.080e-47 Identity = 116/291 (39.86%), Postives = 161/291 (55.33%), Query Frame = 0
Query: 7 LAPRQRDDDCAGGGARKAPRTAT-LQVLLYQRGRYVAVCKPPDVRIDGDFKLTVAKLVQHFLQRRH---EQPQFCTPY---FVHRLDYATSGALLMALSRRAAAFAAKQFETRLVEKSYVALVHGHVSPTIGGVS-------------ARIASMGADFRMKLSACG---RSARTGVRVLSHGTFQGRKVSKLELRPESGRRHQLRLHCALLGAPIVGDATYGACHEAQLFERA---PERMMLHASTLRVRLPPEQRPLPSRARLRRGDVFDDAPVAQLRTDDPLTPQRMRG 271
+ PR+++ D + P A L VL Y+ GRY+ KPPDVRIDG+F TV KL ++ + E+ + T + FVHRLDYATSG +++ L+R+AA AA QFE R V+K Y+ALVHGHV I V+ A + ++M + + G R++ T L+HG+++G V+KL L P+SGRRHQLR+HCA G PIVGDATY ++ F+ P RMMLHA L + LPP Q L R R + + RT DP + + + G
Sbjct: 9 IRPREKEGDAPPTTPGRLPPVAPKLGVLHYEAGRYLITDKPPDVRIDGEFTHTVEKLALSYIVSQGFDVEKAKTETGFGVRFVHRLDYATSGVMMIGLTRKAAGVAATQFEKRSVKKIYLALVHGHVGDDIEVVTDMDNRKSFLTFDQAIADTKPPGYKMVVGSPGNPGRASLTECYPLAHGSYKGAPVTKLLLVPQSGRRHQLRVHCANAGMPIVGDATY-IDDDSVYFKDPNVLPPRMMLHAFELHISLPPPQEKLYGRKSGLRNAIQQE-----FRTVDPFSEKTLEG 293
BLAST of Ggra9007.t1 vs. uniprot
Match: A0A5J4YP60 (RNA pseudouridylate synthase domain-containing protein 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YP60_PORPP) HSP 1 Score: 151 bits (382), Expect = 2.860e-40 Identity = 99/238 (41.60%), Postives = 137/238 (57.56%), Query Frame = 0
Query: 7 LAPRQRDDDCAGGGARKAPRTATLQVLLYQRGRYVAVCKPPDVRIDGDFKLTVAKLVQHFLQRRHEQPQFCTPY---FVHRLDYATSGALLMALSRRAAAFAAKQFETRLVEKSYVALVHGHVSPTIGGVSARIASMGADFRMKL---------SACGRSARTGVRVLSHGTFQGRKVSKLELRPESGRRHQLRLHCALLGAPIVGDATYGACHEAQLFE-RAPERMMLHASTLRVRL 231
+A R R + A + P A ++Y+ YV V KP DVR+DG+ + TV K V L+ + ++ +P VH+LDY+TSG +LMAL+R+AA + A+QFETR +K+Y+ALV+G V T V+ I + F M+L + ++A T V LS G ++G+ +KL L P +GRRHQLRLHC LG I+GDATYG L + R PERM LHA L V L
Sbjct: 1 MATRARAHEPVIHTAGRVPPAAPQFSVIYESDTYVCVNKPFDVRVDGEHEHTVDKFVAARLRDKLDEASASSPLKPRLVHQLDYSTSGVMLMALTRQAANYVARQFETRATKKAYLALVYGSVCDTAHVVNRAIGATDG-FEMRLVDETDSDAERSKAKAATTHVYALSEGFYRGQPAAKLLLVPITGRRHQLRLHCQSLGHTIIGDATYGQDSHWPLGDPRNPERMYLHAYMLAVDL 237
BLAST of Ggra9007.t1 vs. uniprot
Match: M2W3S7 (Ribosomal large subunit pseudouridine synthase A n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W3S7_GALSU) HSP 1 Score: 143 bits (361), Expect = 1.780e-37 Identity = 97/201 (48.26%), Postives = 121/201 (60.20%), Query Frame = 0
Query: 33 LLYQRGRYVAVCKPPDVRIDGDFKLTVAKLVQHFLQRRHEQPQFCTPYFVHRLDYATSGALLMALSRRAAAFAAKQFETRLVEKSYVALVHGHVSPTIGGVSARIASMGAD-FRMKLSAC-GRSARTGVRVLSHGTFQGRK-VSKLELRPESGRRHQLRLHCALLGAPIVGDATYGACHEAQLFE-RAPERMMLHASTLRV 229
LY Y+AV KP DVR+DGDF +TV KLV L+ E+ P FVHRLDYATSG L+ L ++A++ AK F RLVEK Y+ALVHG + RIA+ D F M +SA G+SA+T LS G + V+K+ L+P +GRRHQLR+H G PIVGDATYG + R P RMMLHA L+V
Sbjct: 45 FLYIDEEYLAVNKPADVRMDGDFDVTVTKLVYRKLES--EKGTTRKPRFVHRLDYATSGVLIAGLMDQSASYLAKLFRERLVEKFYLALVHGWTPCKKFVMEERIANHPVDGFMMTVSADRGKSAKTECVPLSFGIYGDHYLVTKVLLKPFTGRRHQLRVHMKYRGFPIVGDATYGVDSVYGPDDVRTPPRMMLHAWKLKV 243
BLAST of Ggra9007.t1 vs. uniprot
Match: L1IS66 (PseudoU_synth_2 domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IS66_GUITC) HSP 1 Score: 128 bits (321), Expect = 1.600e-31 Identity = 98/242 (40.50%), Postives = 132/242 (54.55%), Query Frame = 0
Query: 7 LAPRQRDDDCAGG-GARKAPRTATLQVLLYQRGRYVAVCKPPDVRIDGDFKLTVAKLVQHFLQRRHEQPQFCTPYFVHRLDYATSGALLMALSRRAAAFAAKQFETRLVEKSYVALVHGHVS-PTIGGVSA----------RIAS--MGAD----FRMKL---SACGRSARTGVRVLSHGTFQGRKVSKLELRPESGRRHQLRLHCALLGAPIVGDATYGACHEAQLFERAPERMMLHASTL 227
+ PR+ D D R AP T ++++ YV V K D RI GDF+ TV KL L + H C HRLDYATSGA++ AL+ AAA A+K F R V K Y+ALV GH+ PT+ + A R+ +G D FRMK+ S G+ ++T ++V+S G G+K SK+ L+PE+GRRHQLR+H G PI+GDATY ++ RMMLHA +L
Sbjct: 1 MVPRKSDRDVVTETNGRNAPPPMTGLNVIHRCDNYVVVDKRYDSRISGDFEHTVEKL----LLQEHAAIFPC-----HRLDYATSGAMIWALNSEAAAKASKCFRRRNVIKLYLALVQGHIEGPTLEDLKASRWHGLQDPYRMLDWPIGPDEEHGFRMKVLIPSQGGKVSQTRMKVVSRGECCGKKASKVILQPETGRRHQLRVHMMKFGHPIIGDATYTDDFQSP-------RMMLHAWSL 226
BLAST of Ggra9007.t1 vs. uniprot
Match: RNA pseudouridylate synthase domain-containing protein 1-like isoform X1 n=2 Tax=Papilio polytes TaxID=76194 RepID=UPI0006768D6F (RNA pseudouridylate synthase domain-containing protein 1-like isoform X1 n=2 Tax=Papilio polytes TaxID=76194 RepID=UPI0006768D6F) HSP 1 Score: 126 bits (317), Expect = 5.720e-31 Identity = 84/223 (37.67%), Postives = 123/223 (55.16%), Query Frame = 0
Query: 25 PRTATLQVLLYQRGRYVAVCKPPDVRIDGDFKLTVAKLVQHFLQRRHEQPQFCTP-YFVHRLDYATSGALLMALSRRAAAFAAKQFETRLVEKSYVALVHGHVSPTIGGVSARIAS--MGADFRMKLSA--------CG--RSARTGVRVLSHGTFQGRKVSKLELRPESGRRHQLRLHCALLGAPIVGDATYGACHEAQLFERAPERMMLHASTLRVRLPPE 234
PR ++ LYQ ++ V KP D+ I+ D + +V H ++ + P +FVHRLDY+TSG L MAL++ AAA A + FE RL K Y+A+V GH+S + + + S D K+ A CG RSA T + VL G ++ V+ + L+P +GRRHQLR+HC+++G I+GD TY + +P RM LHA+ L + LP E
Sbjct: 3 PRNMAIE-KLYQSVNFLIVNKPYDMYINSDDENEKNTVVCHIAEQDSHRSNSAQPLHFVHRLDYSTSGVLCMALNKSAAAAAGRLFEKRLTNKYYLAIVRGHLSFKMCDIKYPLGSDRTSPDTSHKMLALTEATRTSCGSPRSAETRLLVLESGYYEDNPVTVVVLKPLTGRRHQLRVHCSVIGHTILGDYTYSNRQDT-----SPHRMFLHATRLVLPLPNE 219
BLAST of Ggra9007.t1 vs. uniprot
Match: A0A367JJK9 (PseudoU_synth_2 domain-containing protein n=5 Tax=Rhizopus TaxID=4842 RepID=A0A367JJK9_RHIAZ) HSP 1 Score: 124 bits (311), Expect = 1.210e-30 Identity = 85/209 (40.67%), Postives = 120/209 (57.42%), Query Frame = 0
Query: 33 LLYQRGRYVAVCKPPDVRIDGDFKLTVAKLVQHFLQRRHEQPQFCTPYF--VHRLDYATSGALLMALSRRAAAFAAKQFETRLVEKSYVALVHGHVSPTIGGVSARIAS-MGADFRMKLSACGRSARTGVRVLSHGTFQGRK----------VSKLELRPESGRRHQLRLHCALLGAPIVGDATYGACHEAQLFERAPERMMLHASTLR 228
++++ ++ V KP D+RI + T V+ LQ ++ TP F VH+LDYATSG ++AL++ AAA AAKQF+ RLV+K+Y+ALV+GH+ + V I DFRM++S GR A T + VL G + + V+K+ L P SGRRHQLRLH LG PI+GD Y E + + RMMLHA ++R
Sbjct: 4 VIHKDNNWLIVNKPYDMRIQS-YNSTDPS-VESILQEKYPN----TPKFRNVHQLDYATSGVYVLALTKSAAALAAKQFQQRLVKKTYLALVNGHMLDDVYMVDQPIEDDPDHDFRMRISPTGRPAETHIHVLQRGYYNYNEDKTGMEKRIPVTKVRLHPISGRRHQLRLHLKYLGHPIIGDYNY----ETEYTDTF--RMMLHAHSIR 200
BLAST of Ggra9007.t1 vs. uniprot
Match: RNA pseudouridylate synthase domain-containing protein 1-like isoform X2 n=1 Tax=Arvicanthis niloticus TaxID=61156 RepID=UPI0014866A00 (RNA pseudouridylate synthase domain-containing protein 1-like isoform X2 n=1 Tax=Arvicanthis niloticus TaxID=61156 RepID=UPI0014866A00) HSP 1 Score: 126 bits (316), Expect = 1.230e-30 Identity = 86/211 (40.76%), Postives = 119/211 (56.40%), Query Frame = 0
Query: 33 LLYQRGRYVAVCKPPDVRIDGDF---KLTVAKLVQHFLQRRHEQPQFCTPY-FVHRLDYATSGALLMALSRRAAAFAAKQFETRLVEKSYVALVHGHVSP---TIGGVSARIASMGADFRMKLSACG-----RSARTGVRVLSHGTFQGRKVSKLELRPESGRRHQLRLHCALLGAPIVGDATYGACHEAQLFERAPERMMLHASTLRVRL 231
++YQ ++ V K D+RID LT+ K +QH + P C + F H+LD++TSGAL +AL++ AA A K F+ R V K+Y+ALV GHV TI R ++ G M + + + T + VL HG + G VSK+ L+P +GR HQLR+HC+ G PIVGD TYG +A+ E P RMMLHA LR+ L
Sbjct: 11 IVYQSSDFLVVNKHWDLRIDSKTWRETLTLQKQLQHHFPELAD-PDTCYGFRFCHQLDFSTSGALCVALNKAAAGRAYKCFKERRVTKAYLALVRGHVQESQVTINYAIGRNSTEGRTHTMCIEGTHGCENPKPSLTELLVLEHGLYAGDPVSKVLLKPLTGRTHQLRVHCSAFGHPIVGDMTYG---QAEDQEDQPFRMMLHAFYLRLHL 217
BLAST of Ggra9007.t1 vs. uniprot
Match: RUSD1 (RNA pseudouridylate synthase domain-containing protein 1 n=43 Tax=Tetrapoda TaxID=32523 RepID=RUSD1_MOUSE) HSP 1 Score: 126 bits (316), Expect = 1.630e-30 Identity = 85/209 (40.67%), Postives = 119/209 (56.94%), Query Frame = 0
Query: 33 LLYQRGRYVAVCKPPDVRIDGDF---KLTVAKLVQHFLQRRHEQPQFCTPY-FVHRLDYATSGALLMALSRRAAAFAAKQFETRLVEKSYVALVHGHVSP---TIGGVSARIASMGADFRMKLSACG-----RSARTGVRVLSHGTFQGRKVSKLELRPESGRRHQLRLHCALLGAPIVGDATYGACHEAQLFERAPERMMLHASTLRV 229
++YQ ++ V K D+RID LT+ K ++H + P C + F H+LD++TSGAL +AL++ AA A K F+ R V K+Y+ALV GHV TI R ++ G M + + + T + VL HG + G VSK+ L+P +GR HQLR+HC+ LG PIVGD TYG +A+ E P RMMLHA LR+
Sbjct: 11 IVYQSSDFLVVNKHWDLRIDSKTWRETLTLQKQLRHHFPELAD-PDTCYGFRFCHQLDFSTSGALCVALNKAAAGSAYKCFKERRVTKAYLALVRGHVQESQVTINYAIGRNSTEGRTHTMCIEGTHGCENPKPSLTELLVLEHGLYAGDPVSKVLLKPLTGRTHQLRVHCSALGHPIVGDLTYG---QAEDQEDQPFRMMLHAFYLRI 215 The following BLAST results are available for this feature:
BLAST of Ggra9007.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra9007.t1 ID=Ggra9007.t1|Name=Ggra9007.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=309bpback to top |