Ggra8981.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8981.t1
Unique NameGgra8981.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length770
Homology
BLAST of Ggra8981.t1 vs. uniprot
Match: A0A2V3IJA3 (BRK domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJA3_9FLOR)

HSP 1 Score: 709 bits (1830), Expect = 6.320e-245
Identity = 437/750 (58.27%), Postives = 519/750 (69.20%), Query Frame = 0
Query:   44 KNSSPDHKRVTIWNRAQGRKIAGNAAPLQKNLDDYLRKHPHCERYNGQDRATRYTQHRRILPVGANVGQVRPQPQ-VVLPVQTVLPLPVSSFS-SSNALHLPVQLVSYPVPLDAANLHLYNAQQR-PSYLVPQYSLPPDLQQXXXXXXXXXXXXXXXXXXXH-------PHQPPPQPSAHHQPLPPSSISASPHQAPVANKHSPVAASHPLNAHAALHKHKSVQQPPLF--PHHTFPLINEHAALDSKLARQAAESTVANALAKANAQMRGHVKAEPNSSFPTNQTAVHPHSAASSSVXXXXXXXXXXXXXXXXXXXXXXXXXGPRNGEDKS-PVQLSPAQFFRDMKVMMQKKAEQSSRAQH--VLPNQAKKNSSSIPSLQEMPVVSNPMQQVPT----QQMVRPAQRIAHSVAQCSDQAPLAASQPYGTSQTPSLTSFDVDAATFQLAGTRIDETESTQSPSSNNQTSSA-LDVSLV-PSPSQELMPSNMTLSESVSQGLDLHATNLSPDAVKDIMRHRADHVDKVLNS-GTSVGLSNPCNISATTTNQMFDASRFNNGKNSASVSRSLSFLLKN-APFASRENSMDFRKGEFVG-KRDVSMDMIRRDISMDLLSSRRIGSQERIDGDLVRDMSIDFFGSSLRNANPDFSMEMQFPNDSNGVQGGAVFELGALTDDVVFGQPFHNLNTPSKTEANATADGRDGRFSRSKIGMSQDDLMVHVLANQGAHQQYRRNVNGSIEDLRELKMPF 769
            K +SPDHKRVTIWNR QGRKIAGNAAPLQKNLDDYLRKHPHCERYNGQDRATRYTQHR+ILPVGAN+  +RP    VVLP+QTVLPLPV ++  S+N +HLPVQL+SYP+PLDA+NLHLYN Q R PSY VP Y + PDL                   XX        P    PQ + HH+P P    +A+PH  P+ N H P     P   +        +  P  F  PH   P++ +  A+D+KLARQAAESTVANA+AKANAQMRGH +  PN + P N      H   ++S                           P++ +DKS PV LSP Q F+DMK ++QKKAEQ+SRAQ+   +P   KK + S+P   EMPVVSNP  ++ T    QQ  +P QR+ H V+Q S  APL  SQ +   Q+ +LT+FDVDAATFQLAGTRIDE E+  SP + +  + A L+V LV PS SQ+LMPSNM+LSES+++G+D+HA   S D  K+  + RAD +DKVLNS GTS  LS+ C +S +  NQMFD++R NNGKNSASVSRS SFL K+ APFASRENSMDFRK +  G KR++SMDMIRRDISMDLL SRRIGSQERIDG+LVRDMSID FG+SLRN N DFSM+MQFP DSN  Q GAV ELGA TDDV FG PFH L   S+ + N+  +GRD +F RSKIGMSQDDLMVHVLANQGAHQQYRRNVNGSIEDLRELKMPF
Sbjct:   48 KPTSPDHKRVTIWNRVQGRKIAGNAAPLQKNLDDYLRKHPHCERYNGQDRATRYTQHRKILPVGANINHLRPPATPVVLPLQTVLPLPVQTYPPSTNPVHLPVQLMSYPLPLDASNLHLYNPQHRHPSYFVPHYPVNPDLSHPPSTAPSHHSLPQQAPSXXXXXXXXXXPALSQPQQTPHHKPQP----AAAPHSLPLHNMHKPKXXXXPSQPY--------LPNPNTFSNPH---PIMRDQLAVDTKLARQAAESTVANAIAKANAQMRGHARMHPNLA-PHNPHLQFHHPTNTTSPATDSDPSLNSSTPPASSLSSAT----PKSNDDKSGPVHLSPTQLFKDMKDLLQKKAEQTSRAQNPDFVP---KKPAPSMPPQHEMPVVSNPEARLHTHAALQQTAQPDQRVHHPVSQSS--APL--SQQFSPPQSSALTAFDVDAATFQLAGTRIDEPEA--SPITTDTPALATLEVGLVVPSASQDLMPSNMSLSESLAEGIDIHALQFSMDDAKNARKQRADDIDKVLNSAGTSGALSHHCTLSPSFANQMFDSARLNNGKNSASVSRSFSFLFKSGAPFASRENSMDFRKCDLGGGKREMSMDMIRRDISMDLLFSRRIGSQERIDGELVRDMSIDCFGNSLRNTNRDFSMDMQFPTDSNPAQSGAVLELGAFTDDVAFGLPFHGLQQ-SRADLNSANEGRDAKFPRSKIGMSQDDLMVHVLANQGAHQQYRRNVNGSIEDLRELKMPF 767          
BLAST of Ggra8981.t1 vs. uniprot
Match: S0F3X0 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F3X0_CHOCR)

HSP 1 Score: 107 bits (268), Expect = 1.610e-20
Identity = 88/243 (36.21%), Postives = 129/243 (53.09%), Query Frame = 0
Query:  462 SFDVDAATFQLAGTRIDETESTQSPSSN------NQTSSALDVSLVPSPSQELMPSNMTLSESVSQGLDLHATNLSPDAV-------------------KDIMRHRADHVDKVLNSGTSVGLSNPCNISATTTNQMFDASRFNNGKNSASVSRSLSFLLKNAPFASRENSMDFRKGEFVG-KRDVSMDMIRRDISMDLLSSRRIGSQERIDGDLVRDMSIDFFGSSLRNANPDFSMEMQFPND 678
            + DVDAAT+QLAGTR++  E +   +++      NQ+ +  + +++ + S ++   + TLS S S G D  A     + +                   KD  + RADHVD  LN G     S P N       QMFDA +  NGK   S+S+S SF++K  P  SRE+SM+FRK    G  RD+S+D ++RD+SM+L+S  R  S +++  +L R         +L  AN DFSMEMQFP +
Sbjct:  363 TIDVDAATYQLAGTRLEGEEVSAVAAASAAMRRQNQSPTYDNSNIMRTDSTDMDVGSTTLSFSGS-GTDSVALATGKEQLQQQQLRRPNQPENQDLEDGKDAKKVRADHVDNFLN-GQPASFSFPAN------GQMFDAFQLPNGKIPPSISQSFSFIMKGGP--SRESSMEFRKNTLNGGNRDMSIDFLKRDLSMELVSQVRKSSGDQVSSELPRXXXXXXXXXALSQANRDFSMEMQFPQN 595          
BLAST of Ggra8981.t1 vs. uniprot
Match: probable transcription factor RL9 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DC4EB (probable transcription factor RL9 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DC4EB)

HSP 1 Score: 86.3 bits (212), Expect = 5.110e-15
Identity = 41/62 (66.13%), Postives = 45/62 (72.58%), Query Frame = 0
Query:   44 KNSSPDHKRVTIWNRAQGRKIAGNAAPLQKNLDDYLRKHPHCERYNGQDRATRYTQHRRILP 105
            K  + D  RVTIWNR QGRKIAGNAAPL +NL  YL  HPHCE Y  QDRA RY+ +R ILP
Sbjct:   75 KPDASDKARVTIWNRPQGRKIAGNAAPLPRNLSKYLHDHPHCEVYTDQDRAPRYSVNRPILP 136          
BLAST of Ggra8981.t1 vs. uniprot
Match: A0A7S3EIA5 (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EIA5_9RHOD)

HSP 1 Score: 73.2 bits (178), Expect = 6.360e-12
Identity = 39/78 (50.00%), Postives = 46/78 (58.97%), Query Frame = 0
Query:   45 NSSPDHKRVTIWNRAQGRKIAGNAAPLQKNLDDYLRKHPHCERYNGQDRATRYTQHRRILPVGANVGQVRPQPQVVLP 122
            +  P   RVTIWNR + RKIAGNAAP  KNL  YL KHP CE Y  QD+  R  +   +LP  A   Q+ P  Q +LP
Sbjct:   13 SGDPGMTRVTIWNRVEERKIAGNAAPFAKNLASYLSKHPGCEVYENQDKQVRTRKTMALLPA-APPPQMMPSQQPMLP 89          
BLAST of Ggra8981.t1 vs. uniprot
Match: A0A2V3J215 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J215_9FLOR)

HSP 1 Score: 73.9 bits (180), Expect = 1.650e-10
Identity = 36/67 (53.73%), Postives = 43/67 (64.18%), Query Frame = 0
Query:   26 PSSVDPASAAASPVVAKRKNSSPDHKRVTIWNRAQGRKIAGNAAPLQKNLDDYLRKHPHCERYNGQD 92
            PS   P    + PV A      PD++ VTIWNR + RKIAGNAAPL++N+D YL KH  CE Y GQD
Sbjct:   64 PSPRSPYHPQSPPVQADDSPVDPDNEHVTIWNRLERRKIAGNAAPLRRNVDAYLHKHKDCEVYTGQD 130          
BLAST of Ggra8981.t1 vs. uniprot
Match: A0A7S0G1J1 (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G1J1_9RHOD)

HSP 1 Score: 75.1 bits (183), Expect = 2.180e-10
Identity = 36/69 (52.17%), Postives = 46/69 (66.67%), Query Frame = 0
Query:   40 VAKRKNSSPDHKRVTIWNRAQGRKIAGNAAPLQKNLDDYLRKHPHCERYNGQDRATRYTQHRRILPVGA 108
            V   +    D +RV IWNR + RKIAGNAAPL KNL+ YL+KHP CE YN QD+     ++R +LP G+
Sbjct:   19 VMMNQGEGDDQRRVPIWNRVEQRKIAGNAAPLAKNLNAYLQKHPACEVYNLQDKRVVIRRNRPLLPQGS 87          
BLAST of Ggra8981.t1 vs. uniprot
Match: A0A7S3EHQ8 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EHQ8_9RHOD)

HSP 1 Score: 73.2 bits (178), Expect = 4.130e-10
Identity = 39/78 (50.00%), Postives = 46/78 (58.97%), Query Frame = 0
Query:   45 NSSPDHKRVTIWNRAQGRKIAGNAAPLQKNLDDYLRKHPHCERYNGQDRATRYTQHRRILPVGANVGQVRPQPQVVLP 122
            +  P   RVTIWNR + RKIAGNAAP  KNL  YL KHP CE Y  QD+  R  +   +LP  A   Q+ P  Q +LP
Sbjct:   17 SGDPGMTRVTIWNRVEERKIAGNAAPFAKNLASYLSKHPGCEVYENQDKQVRTRKTMALLPA-APPPQMMPSQQPMLP 93          
BLAST of Ggra8981.t1 vs. uniprot
Match: M2W6S3 (BRK domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W6S3_GALSU)

HSP 1 Score: 73.9 bits (180), Expect = 4.210e-10
Identity = 35/56 (62.50%), Postives = 42/56 (75.00%), Query Frame = 0
Query:   42 KRKNSSPDHK----RVTIWNRAQGRKIAGNAAPLQKNLDDYLRKHPHCERYNGQDR 93
            K KNS+  H      V+IWNR + RKIAGNAAPL KNL++YL+KHP CE YNGQD+
Sbjct:  214 KTKNSTVSHATGGGHVSIWNRVEKRKIAGNAAPLWKNLENYLQKHPECEVYNGQDK 269          
BLAST of Ggra8981.t1 vs. uniprot
Match: A0A7S2ZZB2 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZZB2_9RHOD)

HSP 1 Score: 73.2 bits (178), Expect = 1.050e-9
Identity = 39/78 (50.00%), Postives = 46/78 (58.97%), Query Frame = 0
Query:   45 NSSPDHKRVTIWNRAQGRKIAGNAAPLQKNLDDYLRKHPHCERYNGQDRATRYTQHRRILPVGANVGQVRPQPQVVLP 122
            +  P   RVTIWNR + RKIAGNAAP  KNL  YL KHP CE Y  QD+  R  +   +LP  A   Q+ P  Q +LP
Sbjct:   17 SGDPGMTRVTIWNRVEERKIAGNAAPFAKNLASYLSKHPGCEVYENQDKQVRTRKTMALLPA-APPPQMMPSQQPMLP 93          
BLAST of Ggra8981.t1 vs. uniprot
Match: A0A7S0BMK2 (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BMK2_9RHOD)

HSP 1 Score: 66.6 bits (161), Expect = 2.790e-9
Identity = 30/42 (71.43%), Postives = 33/42 (78.57%), Query Frame = 0
Query:   51 KRVTIWNRAQGRKIAGNAAPLQKNLDDYLRKHPHCERYNGQD 92
            + VTIWN+ + RKIAGNAAPL KNL  YL KHP CE YNGQD
Sbjct:   68 EHVTIWNKQEKRKIAGNAAPLGKNLAKYLGKHPECEVYNGQD 109          
The following BLAST results are available for this feature:
BLAST of Ggra8981.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJA36.320e-24558.27BRK domain-containing protein n=1 Tax=Gracilariops... [more]
S0F3X01.610e-2036.21Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
probable transcription factor RL9 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DC4EB5.110e-1566.13probable transcription factor RL9 n=1 Tax=Mercenar... [more]
A0A7S3EIA56.360e-1250.00Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A2V3J2151.650e-1053.73Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S0G1J12.180e-1052.17Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S3EHQ84.130e-1050.00Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M2W6S34.210e-1062.50BRK domain-containing protein n=1 Tax=Galdieria su... [more]
A0A7S2ZZB21.050e-950.00Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S0BMK22.790e-971.43Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006576BRK domainPFAMPF07533BRKcoord: 51..83
e-value: 8.7E-8
score: 31.6
IPR037259BRK domain superfamilyGENE3D3.40.5.120coord: 48..90
e-value: 9.1E-9
score: 36.7
IPR037259BRK domain superfamilySUPERFAMILY160481BRK domain-likecoord: 49..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 384..408
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..230
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..189
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 357..408
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 474..497
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 300..330
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..215
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 308..330
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..264
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 475..497

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:1044131..1046440 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8981.t1Ggra8981.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 1044131..1046440 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8981.t1 ID=Ggra8981.t1|Name=Ggra8981.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=770bp
MSTPTVTNPSADADADAAAAAAASSPSSVDPASAAASPVVAKRKNSSPDH
KRVTIWNRAQGRKIAGNAAPLQKNLDDYLRKHPHCERYNGQDRATRYTQH
RRILPVGANVGQVRPQPQVVLPVQTVLPLPVSSFSSSNALHLPVQLVSYP
VPLDAANLHLYNAQQRPSYLVPQYSLPPDLQQPQHSQQPQPNQQPQPSPA
PHPHQPPPQPSAHHQPLPPSSISASPHQAPVANKHSPVAASHPLNAHAAL
HKHKSVQQPPLFPHHTFPLINEHAALDSKLARQAAESTVANALAKANAQM
RGHVKAEPNSSFPTNQTAVHPHSAASSSVPTSATTAAAAAAAAAAAAAAA
AAAAGPRNGEDKSPVQLSPAQFFRDMKVMMQKKAEQSSRAQHVLPNQAKK
NSSSIPSLQEMPVVSNPMQQVPTQQMVRPAQRIAHSVAQCSDQAPLAASQ
PYGTSQTPSLTSFDVDAATFQLAGTRIDETESTQSPSSNNQTSSALDVSL
VPSPSQELMPSNMTLSESVSQGLDLHATNLSPDAVKDIMRHRADHVDKVL
NSGTSVGLSNPCNISATTTNQMFDASRFNNGKNSASVSRSLSFLLKNAPF
ASRENSMDFRKGEFVGKRDVSMDMIRRDISMDLLSSRRIGSQERIDGDLV
RDMSIDFFGSSLRNANPDFSMEMQFPNDSNGVQGGAVFELGALTDDVVFG
QPFHNLNTPSKTEANATADGRDGRFSRSKIGMSQDDLMVHVLANQGAHQQ
YRRNVNGSIEDLRELKMPF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006576BRK_domain
IPR037259BRK_sf