Ggra8970.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8970.t1
Unique NameGgra8970.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length359
Homology
BLAST of Ggra8970.t1 vs. uniprot
Match: A0A2V3ITZ0 (Hexuronic acid methyltransferase AglP n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITZ0_9FLOR)

HSP 1 Score: 473 bits (1218), Expect = 6.500e-165
Identity = 234/355 (65.92%), Postives = 290/355 (81.69%), Query Frame = 0
Query:    1 MGSMKSEEKRGTPRRI-AENIVKIISKLSITAFLGIRRNARTISLVVIIACVLVLIASTSDNDMLSRHGREKASSYTKSVVRHCRPNPSYGLGRTFDARVRGVNVSYAAWTGEKFFEHEVVAIRTHEAVRMMSKLKRSATLLDVGANIGKVTFPTLAMAQTHTVVAVEPVGFNIDHLCMTANLNGWLGHAGFLLLKAALSDKEGSMEIFVPEGREDNAALSESAATANVGGKDHGEQVNLLTGDKLLSEGGFKPDLIKIDTQGHELFVLRGLREYMAKTKPGELVIMAESDPKLMRKSGVNPKDIYQLVVVDLGYNAYCRPLIDVENERFVVKGTPLSYEQYPPGGCRDIFYYKS 354
            M S K EEKR + R       V+I+SK  +TA L +R NARTI+L+  + C L+L++   +  M     R    SY++SV+R C P+P++G+G TF+ARVRGVNVS+AAWT  +  E +VVA+RTHEAVR+M KLKR+ TLLDVGANIGKVTFPTLAMAQTHTV+AVEPVG N+D LCMTANLNGWLGHAGFLLLKAA+SD+ GS+EIFVPEGREDN+AL+E+AA ANVG  +HGE V+++ GD +L EGGFKPDLIKIDTQGHEL VLRGL++Y+++ K  E+++MAESDPKLM  SGV+PK+IYQL+VV+LGY AYCRP +DVE+E+FVVKGTPLS  +YPPGGCRDIFY+KS
Sbjct:    1 MKSRKIEEKRTSTRTSRGHGGVRILSKRLMTALLNVRSNARTIALLATVVCALLLMSGVDERVMHPYEARPH--SYSRSVIRECHPDPTHGMGHTFEARVRGVNVSFAAWTRNQTNERDVVALRTHEAVRIMGKLKRAGTLLDVGANIGKVTFPTLAMAQTHTVIAVEPVGVNLDQLCMTANLNGWLGHAGFLLLKAAMSDRAGSIEIFVPEGREDNSALNEAAAVANVGKAEHGEVVDVVVGDTVLREGGFKPDLIKIDTQGHELHVLRGLKKYLSQAKAREVLVMAESDPKLMHISGVDPKEIYQLMVVELGYKAYCRPTVDVEDEQFVVKGTPLSRREYPPGGCRDIFYFKS 353          
BLAST of Ggra8970.t1 vs. uniprot
Match: A0A836BND2 (Methyltransf_21 domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BND2_9CHLO)

HSP 1 Score: 124 bits (312), Expect = 6.600e-30
Identity = 89/238 (37.39%), Postives = 124/238 (52.10%), Query Frame = 0
Query:  133 KLKRSATLLDVGANIGKVTFPTLA-MAQTHTVVAVEPVGFNIDHLCMTANLNGW-LGHAG--FLLLKAALSDKEGSMEIFVPEGREDNAALSESAATANVGGKDHGEQVNLLTGDKLLSE---------GGFKPDLIKIDTQGHELFVLRGLREYMAKTKPGELVIMAESDPKLMRKSGVNPKDIYQLVVVDLGYNAYCRPLIDVEN----ERFVVKGTPLSYEQYPPGGCRDIFYYK 353
            K K  +  +DVGANIG+ + P +      H+VVA+EPV  N++ +C     N   LG AG  + L+  A S   G ++I VP GR DNAA+S  AA  NVGG    E++     D  L++         GG K   IKIDTQGHE +VL+GL   ++  K  +L I AE+DP LM  +GVNP ++Y  +    G+ AYC   + V      E   V G   + +      C D+F+ K
Sbjct:   29 KFKVPSLFVDVGANIGRTSVPIVTNTGAAHSVVAIEPVRSNLNFICQDLFFNAIPLGGAGARYHLVAGAASAAWGEIQIHVPIGRGDNAAISAEAAVKNVGGAAEAERITTFPLDDYLAQLRRHRAIPVGGLKG--IKIDTQGHEYYVLKGLNHTLSTVK--QLAIYAENDPGLMAAAGVNPSEMYAYMRGH-GFKAYCYADVSVTTVDGQEVIAVSGNEEAGDSIH---CGDMFWIK 258          
BLAST of Ggra8970.t1 vs. uniprot
Match: A0A7S2KEN7 (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KEN7_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 9.310e-20
Identity = 90/334 (26.95%), Postives = 149/334 (44.61%), Query Frame = 0
Query:   38 NARTISLVVIIACVLVLIA----------------STSDNDMLSRHGREKASSYTKSVVRHCRPNPSYGLGRTFDARVRGVNVSYAAWTGEKFFEHEV-------VAIRTHEAVRMMSKL-----------KRSATLLDVGANIGKVTFPTLAMAQTHTVVAVEPVGFNIDHLCMTANLNGWLGHAGFLLLKAALSDKEGSMEIFVPEGREDNAALSESAATANVGGKDHGEQVNLLTGDKLLSEGGFKPDL------IKIDTQGHELFVLRGLREYMAKTKPGE------LVIMAESDPKLMRKSGVNPKDIYQLVVVDLGYNAYCRPLIDVE 325
            + R I ++VIIA  ++++A                +  D D  S H R+  +S    +      NP  G     D  V     +   W     +  ++        A+++H    + +KL            R  T+LD+GAN+G    P  +      VVA EP+  NI+ L     +NG +      L++ A++++ G +EI+ P GR DN ALS   +T NVGG    E+V  +  D  ++      DL      +KIDTQGHEL VL+G++ +++     E       V++AE    L + +G +P ++   +   LGY   C+ L D++
Sbjct:    3 STRRIYIIVIIAVAMLVVAQNLSSPSCFVFQDGQRNVEDTDNNSAHVRDSLASTAYPLA-----NPKPGFSLLGDRGVVAGTCADIGWNYVFSYAEDIRSQKWDLQALKSHRTQGVATKLCGYGYDKYFDGARGYTMLDIGANMGLSLMPYYSKGWK--VVAFEPIKDNINTLRRNLFING-ITEDQVALVEGAVTNQSGILEIYAPRGRTDNTALSRKGSTLNVGGDVDVEKVTAIEIDTYINNA-VSSDLRRNIMLVKIDTQGHELNVLQGMKSFLSAPPSNEDLGGWSFVVVAEYHVGLQKAAGHDPNEVLNFMR-SLGYEVRCK-LTDID 325          
BLAST of Ggra8970.t1 vs. uniprot
Match: A0A836C407 (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C407_9CHLO)

HSP 1 Score: 90.5 bits (223), Expect = 6.480e-18
Identity = 65/174 (37.36%), Postives = 88/174 (50.57%), Query Frame = 0
Query:  193 LLKAALSDKEGSMEIFVPEGREDNAALSESAATANVGGKDHGEQVNLLTGDKLLSE---------GGFKPDLIKIDTQGHELFVLRGLREYMAKTKPGELVIMAESDPKLMRKSGVNPKDIYQLVVVDLGYNAYCRPLIDVEN----ERFVVKGTPLSYEQYPPGGCRDIFYYK 353
            L+  A S   G +EI VPEGR DNAA+S  AAT NVGGK   E+V     D  L+          GG K   IKIDTQGHE +V++GL   +A  +  +LV+ AE+  +L   +GV P ++Y  +    G+  YC   I+V      E     GT  +        C+DI + K
Sbjct:   21 LIAGAASAGWGQVEIHVPEGRGDNAAISAVAATKNVGGKSKPEEVITFPMDDHLANMRRHRSVPAGGLKG--IKIDTQGHEFYVIKGLNHTLAAAQ--QLVVFAENAVELTEAAGVKPSEVYSYMRGH-GFRGYCEVDIEVSERDGKEVITASGTEETGNDIE---CKDIIWVK 186          
BLAST of Ggra8970.t1 vs. uniprot
Match: A0A2K8YZI4 (Methyltransf_21 domain-containing protein n=1 Tax=Spirosoma pollinicola TaxID=2057025 RepID=A0A2K8YZI4_9BACT)

HSP 1 Score: 73.9 bits (180), Expect = 2.790e-11
Identity = 71/229 (31.00%), Postives = 106/229 (46.29%), Query Frame = 0
Query:  126 EAVRMMSKLKRSATLLDVGANIGKVTFPTLAMAQTHTVVAVEPVGFNIDHLCMTANLNGWLGHAGFLLLKAALSDKEGSMEIFVPEGREDNAALSESAATANVGGKDHGEQVNL--LTGDKLLSEGGFKPDLIKIDTQGHELFVLRGLREYMAKTKPGELVIMAESDPKLMRKSGVNPKDIYQLVVVDLGYNAYCRPLIDVENERFVVKGTPLSYEQYPPGGCRDIFYY 352
            E   ++S +K    +LD+GAN+G  +      A+   V+A EP   N D L     LN        +   AALSDK+ ++ ++       +  L            D  E V++  L  D  + E   + DLIKID QG E FVL+G R  +AK  P   ++++E  P+ +  SG +P D Y  ++ DLGY       ID EN + VV  T   YE+    G + +  Y
Sbjct:   73 ETQTILSYVKEDTVMLDIGANMGFYSIRVGQKAKKGKVIAFEPDPGNFDTLQKNLVLNNL---TNVMPYNAALSDKKETLRLYKHPFNVGDYRLYNDG--------DFKEYVDVPTLRLDDTVKE---RVDLIKIDVQGFEYFVLKGGRSILAKYMP---IVISEFWPRGLYNSGASPAD-YLTMMKDLGYGV---SRIDEENNK-VVSAT---YEELHELGSKPVNRY 276          
BLAST of Ggra8970.t1 vs. uniprot
Match: A0A1V5GIX3 (2-O-methyltransferase NoeI n=1 Tax=Bacteroidetes bacterium ADurb.BinA245 TaxID=1852818 RepID=A0A1V5GIX3_9BACT)

HSP 1 Score: 73.9 bits (180), Expect = 3.040e-11
Identity = 56/193 (29.02%), Postives = 95/193 (49.22%), Query Frame = 0
Query:  128 VRMMSKLKRSA-TLLDVGANIGKVTFPTLAMAQTHT-VVAVEPVGFNIDHLCMTANLNGWLGHAGFLLLKAALSDKEGSMEIFVPEGREDNAALSESAATANVGGKDHGEQVNLLTGDKLLSEGGFKP-DLIKIDTQGHELFVLRGLREYMAKTKPGELVIMAESDPKLMRKSGVNPKDIYQLVVVDLGYNAY 317
            +R   +L R   T+ D+G ++G  +      A T T +   EP+    +       LNG+       L   ALS+++GS++I +  G ++N  +S   A A+  GK   E V   T D   +E   K  DL+KID +G E +VL+G+++ +A  +P   V++ E   + +   G++ K +YQ    D  Y+ Y
Sbjct:   74 IRFWQQLARKRKTIFDIGGHVGYYSLVAAKAASTDTKIYCFEPIRQTFERAKENIALNGY---QNIYLQNFALSNEDGSLQINI--GGDENWGMSSINAHAHTSGKT--ETVKKQTVDSFCNEHNIKQIDLVKIDVEGSEFYVLQGMKQMIASARP---VVLIEILEQTLSAQGIDVKSLYQFFA-DYHYHPY 255          
BLAST of Ggra8970.t1 vs. uniprot
Match: A0A2V9KDA5 (Methyltransf_21 domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9KDA5_9BACT)

HSP 1 Score: 72.8 bits (177), Expect = 6.640e-11
Identity = 64/186 (34.41%), Postives = 92/186 (49.46%), Query Frame = 0
Query:  129 RMMSKLKRSATLLDVGANIG-KVTFPTLAMAQTHTVVAVEPVGFNIDHLCMTANLNGWLGHAGFLLLKAALSDKEGSMEIFVPEGR----EDNAALSESAATANVGGKDHGEQVNLLTGDKLLSEGGFK-PDLIKIDTQGHELFVLRGLREYMAKTKPGELVIMAESDPKLMRKSGVNPKDIYQLV 308
            R++S LK    + DVGAN+G    F   A+     ++A EP     + L    +LNG    +   +   AL +   + E+ +P  R       A LSE+   A  G     ++V ++ GD+L+       P L+KID +GHE  VLRGLR  +A   PG  V+  E  PKL+ K GVNP+ I  LV
Sbjct:   77 RLVSTLKTGDVVYDVGANMGLHSVFFGQAVGPAGQIIAFEPEPHYCERLRSNVSLNGL---SNVRIFPLALGEHSYASEL-LPAVRGLASPRLAELSEAQTRARAG-----QEVRVIEGDRLVETEKLPVPRLVKIDVEGHEYAVLRGLRGTLAN--PGCEVVCCEVHPKLLPK-GVNPEKIVSLV 250          
BLAST of Ggra8970.t1 vs. uniprot
Match: A0A3R7AN22 (FkbM family methyltransferase n=1 Tax=Methanophagales archaeon TaxID=2056316 RepID=A0A3R7AN22_9EURY)

HSP 1 Score: 70.1 bits (170), Expect = 7.050e-10
Identity = 61/213 (28.64%), Postives = 100/213 (46.95%), Query Frame = 0
Query:  109 WTGEKFFEHEVVAIRTHEAVRMMSKLKRSATLLDVGANIGKVTFPTLA-MAQTHTVVAVEPVGFNIDHLCMTANLNGWLGHAGFLLLKAALSDKEGSMEIFVPEGREDNAALSESAATANVGGKDHG--EQVNLLTGDKLLSEGGFKP-DLIKIDTQGHELFVLRGLREYMAKTKPGELVIMAESDPKLMRKSGVNPKDIYQLVVVDLGYNAY 317
            W   + F   V  +   +       +K    ++DVGA+IG  T    A + ++  V A EP       L     +N +   +   L   A+SDKEG +E+++ +      A++  A +  V     G  E+   +T D  L +   K  DLIKID +G E  VLRG++E ++K  P    I+ E + + ++ SG +   IY+ ++ D GY AY
Sbjct:   78 WIPIQLFWMGVYFVERKQTEHFKKLIKPGDIVIDVGAHIGYYTLIAAARVGKSGHVYAFEPTSNTFKILQKNIQMNDFTNVS---LYNLAVSDKEGYVELYLSD------AINTGATSITVSEFFSGKIEKAKCITIDSFLKKEDIKKVDLIKIDVEGAEPKVLRGMKELLSKQSPK---ILIEINEERLKSSGYSKDHIYKFLL-DKGYKAY 277          
BLAST of Ggra8970.t1 vs. uniprot
Match: A0A450UG32 (Methyltransferase, FkbM family n=3 Tax=Candidatus Kentron sp. LFY TaxID=2126342 RepID=A0A450UG32_9GAMM)

HSP 1 Score: 69.3 bits (168), Expect = 1.000e-9
Identity = 68/204 (33.33%), Postives = 97/204 (47.55%), Query Frame = 0
Query:  111 GEKFFEHEVVAIRTHEAVRMMSKLKRSATLLDVGANIGKVTFPTLAM-AQTHTVVAVEPV----GFNIDHLCMTANLNGWLGHAGFLLLKAALSDKEGSMEIFVPEGREDNAALSESAATANVGGKDHGEQVNLLT--GDKLLSEGGF-KPDLIKIDTQGHELFVLRGLREYMAKTKPGELVIMAESDPKLMRKSGVNPKDIYQ 306
            GE   +  +      E  R +     S  +LDVGANIG     +LA+ A+ H V+A EPV    G  + ++    N++    +        ALSD  GS  IFV +      +  E          D+ + VN +   GD+LL+E    K DLIKID +GHELFVL GL + + K KP   +IM   DP+ + +  +N  D  Q
Sbjct:   25 GEIIIKRGIYEKEVLEITRKLLGSIPSPIVLDVGANIGN---HSLALSAKAHLVLAFEPVPEIYGLLVKNIAQN-NIHNIQAY------NYALSDSNGSAVIFVTKNNNLGGSSLEERG-------DNVKPVNTVKRIGDELLAELNISKVDLIKIDVEGHELFVLEGLSKAIRKQKP--YIIMEWEDPESIER--LNNSDFMQ 207          
BLAST of Ggra8970.t1 vs. uniprot
Match: FkbM family methyltransferase n=1 Tax=Prochlorococcus marinus TaxID=1219 RepID=UPI00094D03C4 (FkbM family methyltransferase n=1 Tax=Prochlorococcus marinus TaxID=1219 RepID=UPI00094D03C4)

HSP 1 Score: 68.6 bits (166), Expect = 1.800e-9
Identity = 61/208 (29.33%), Postives = 103/208 (49.52%), Query Frame = 0
Query:  140 LLDVGANIGKVTFPTLAMAQTH-TVVAVEPVGFNIDHLCMTANLNGWLGHAGFLLLKAALSDKEGSMEIFVP-EGREDNAALSESAATANVGGKDHGEQVNLLTGDKLLSEGGFKP-DLIKIDTQGHELFVLRGLREYMAKTKPGELVIMAESDPKLMRKSGVNPKDIY------QLVVVDLGYNAYCRPLIDVENERFVVKGTPLSY 338
            +LD+GANIG  T     +A  + TV+A+EP   +  +L  + N   +     F L   A SD +  + +++  + R DN   S +    ++        V  LT D+LL +   +  DLIKID QG+E  VL+G+R  +  +K  +L+I++E  PK + ++G NPK+        Q  + +L  N     L   ++++F+ K     Y
Sbjct:   75 ILDIGANIGYYTALFSQLAGVNGTVIAIEPDEESYKYLTKSVNTFNYKNVFSFRL---AASDTKQKLPLYISKDNRGDNRLYSTNKKRKSI-------IVECLTVDELLKKNKIESLDLIKIDVQGYEPKVLKGMRNIVKSSK--KLIILSEFWPKGILEAGENPKEFLATLRKMQFQLFELKKNGSLILLKPCDDQQFINKYRGRKY 270          
The following BLAST results are available for this feature:
BLAST of Ggra8970.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ITZ06.500e-16565.92Hexuronic acid methyltransferase AglP n=1 Tax=Grac... [more]
A0A836BND26.600e-3037.39Methyltransf_21 domain-containing protein n=1 Tax=... [more]
A0A7S2KEN79.310e-2026.95Hypothetical protein n=2 Tax=Skeletonema marinoi T... [more]
A0A836C4076.480e-1837.36Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
A0A2K8YZI42.790e-1131.00Methyltransf_21 domain-containing protein n=1 Tax=... [more]
A0A1V5GIX33.040e-1129.022-O-methyltransferase NoeI n=1 Tax=Bacteroidetes b... [more]
A0A2V9KDA56.640e-1134.41Methyltransf_21 domain-containing protein n=1 Tax=... [more]
A0A3R7AN227.050e-1028.64FkbM family methyltransferase n=1 Tax=Methanophaga... [more]
A0A450UG321.000e-933.33Methyltransferase, FkbM family n=3 Tax=Candidatus ... [more]
FkbM family methyltransferase n=1 Tax=Prochlorococcus marinus TaxID=1219 RepID=UPI00094D03C41.800e-929.33FkbM family methyltransferase n=1 Tax=Prochlorococ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 126..315
e-value: 4.6E-28
score: 99.9
NoneNo IPR availablePANTHERPTHR34203METHYLTRANSFERASE, FKBM FAMILY PROTEINcoord: 133..322
NoneNo IPR availablePANTHERPTHR34203:SF12SLR0909 PROTEINcoord: 133..322
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 60..358
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..59
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..40
NoneNo IPR availableTMHMMTMhelixcoord: 42..59
IPR006342Methyltransferase FkbMPFAMPF05050Methyltransf_21coord: 142..273
e-value: 1.1E-7
score: 32.1
IPR006342Methyltransferase FkbMTIGRFAMTIGR01444TIGR01444coord: 139..277
e-value: 1.2E-23
score: 82.1
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 133..307

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:1001426..1002502 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8970.t1Ggra8970.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 1001426..1002502 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8970.t1 ID=Ggra8970.t1|Name=Ggra8970.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=359bp
MGSMKSEEKRGTPRRIAENIVKIISKLSITAFLGIRRNARTISLVVIIAC
VLVLIASTSDNDMLSRHGREKASSYTKSVVRHCRPNPSYGLGRTFDARVR
GVNVSYAAWTGEKFFEHEVVAIRTHEAVRMMSKLKRSATLLDVGANIGKV
TFPTLAMAQTHTVVAVEPVGFNIDHLCMTANLNGWLGHAGFLLLKAALSD
KEGSMEIFVPEGREDNAALSESAATANVGGKDHGEQVNLLTGDKLLSEGG
FKPDLIKIDTQGHELFVLRGLREYMAKTKPGELVIMAESDPKLMRKSGVN
PKDIYQLVVVDLGYNAYCRPLIDVENERFVVKGTPLSYEQYPPGGCRDIF
YYKSGQNL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006342FkbM_mtfrase
IPR029063SAM-dependent_MTases