Ggra8967.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8967.t1
Unique NameGgra8967.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length443
Homology
BLAST of Ggra8967.t1 vs. uniprot
Match: A0A2V3IZ84 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ84_9FLOR)

HSP 1 Score: 499 bits (1286), Expect = 2.880e-173
Identity = 295/442 (66.74%), Postives = 328/442 (74.21%), Query Frame = 0
Query:    1 MNASTDSRCSTLHTRSSSPTPSLNPTWESRYEELLRWRAEHGDTCVPKAEGALGRWVARQRELKRTGKLDGTREQALNSINFVWNTVTAMWEERFRKLSEWKKQHGHCAVPIAQGELGTWVSKQRQLRKRGKLSKEKIDALDSLKFTWSTAEADWEDKFKRLVEWTRERGHASVPFNEGELGWWVNTQRQCKRKGKLSASREARLQSLGFVWNPSNSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNTVSSADTTPSCTPEKAEKSVCVHDAAAMMLFPNDLTLPAPYLKEEMELFGDSCSAMCADVLLADMGAAAGGNELMGSGMAGESLLQSQWGGSILSSPLFGDNSAAAAAAAMNVGAQPLGLGTGLMDGGQAFGMXXXXXXXXXXXXXXXXXXXXXXXSIVPSAADDLEQILSRDHGCVLDQSTIDSLTCEEQL 442
            MN+++DSR S+LH  S+S   SLNPTWESRY+ELLRWRAEHGDTCVPKAEGALGRWVARQRELKRTGKLD  REQALNSINFVWNTVTAMWEERFRKLSEWKK+HGHCAVPIAQGELGTWVSKQRQLRKRGKLSKEK+DALDSLKFTWSTAEADWEDKFKRLVEW RE GHASVPFNEGELGWWVNTQRQCKRKGKLS SRE+RL+SLGFVWNPSNSRS     XXXXXXXXXXXXXXXXXXXXXX                 EK EK++ +HD++ ++LFPNDL   APY K+E ELF D+ S + ADVL AD+        L+      E   QS W  SILSSPL  D++A   +   N+ A P  L T      Q FG+                       +++PS ADDLEQ+ +RDH C LDQ+TIDSLTCEE L
Sbjct:    1 MNSTSDSR-SSLHATSTSQPTSLNPTWESRYQELLRWRAEHGDTCVPKAEGALGRWVARQRELKRTGKLDPVREQALNSINFVWNTVTAMWEERFRKLSEWKKKHGHCAVPIAQGELGTWVSKQRQLRKRGKLSKEKVDALDSLKFTWSTAEADWEDKFKRLVEWAREHGHASVPFNEGELGWWVNTQRQCKRKGKLSPSRESRLESLGFVWNPSNSRSRTSNTXXXXXXXXXXXXXXXXXXXXXX-----------------EKPEKNLYLHDSSNIVLFPNDLPFQAPYFKDETELFPDNFSPVSADVLFADITQHPTNEVLIPQ--PSEPFSQSFWPTSILSSPLLNDSAANGFSMPQNLQAIPSVLDT------QGFGVP----------------------NLLPSPADDLEQLFARDHTCFLDQTTIDSLTCEEPL 394          
BLAST of Ggra8967.t1 vs. uniprot
Match: R7QEH9 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEH9_CHOCR)

HSP 1 Score: 397 bits (1021), Expect = 4.950e-133
Identity = 238/445 (53.48%), Postives = 269/445 (60.45%), Query Frame = 0
Query:   11 TLHTRSSSPTPSLNPTWESRYEELLRWRAEHGDTCVPKAEGALGRWVARQRELKRTGKLDGTREQALNSINFVWNTVTAMWEERFRKLSEWKKQHGHCAVPIAQGELGTWVSKQRQLRKRGKLSKEKIDALDSLKFTWSTAEADWEDKFKRLVEWTRERGHASVPFNEGELGWWVNTQRQCKRKGKLSASREARLQSLGFVWNPSNSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNTVSSADTTPSC------TPEKAEKSVCVHDAAAMMLFPNDLTLPAPYLKEEMELFGDSCSAM------CADVLLADMGAAAGGNELMGSGMAGESLLQSQWGGSILSSPLFGDNSAAAAAAAMNVGAQPLGLGTGLMDGGQAFGMXXXXXXXXXXXXXXXXXXXXXXXSIVPSAADDLEQILSRDHG-CVLDQSTIDSLTCEEQL 442
            T+ T   S   S NP+WESRYEELL+WRA  GDTCVPKAEGALGRWVARQRELKRTGKLD  RE ALNSINFVWNTVTAMWEERFR+LSEWK+ HGHCAVPIAQGELGTWVSKQRQLRKRGKLSKEK+DALDSLKFTWSTAEADWEDKFKRL  WTRE GHASVPFNEGELGWWVNTQRQCKRKGKL+ SREARLQ+LGFVWNPSNSRS                             +NT ++             TPEK E ++    A +     + L L A   KEE + F D+ S +      C +V             L     A   L  + W  +ILSSP+    +       M + + P      +    Q+F M                         V   ++ LEQILSRD G CV DQ+ IDSLTC+E L
Sbjct:   17 TVSTGHVSTPSSPNPSWESRYEELLQWRAVRGDTCVPKAEGALGRWVARQRELKRTGKLDPGREHALNSINFVWNTVTAMWEERFRRLSEWKRIHGHCAVPIAQGELGTWVSKQRQLRKRGKLSKEKVDALDSLKFTWSTAEADWEDKFKRLCGWTREHGHASVPFNEGELGWWVNTQRQCKRKGKLNQSREARLQTLGFVWNPSNSRSRA---------------------------ANTTTNXXXXXXXXXXXVSTPEKIETTIGSDVATS-----DILQLFADQSKEEPDFFQDNISPVSAEPMPCTEVTQVSTPPTTQAESLPSPQAA--LLPYNMWSPAILSSPMLNMPN-------MQMMSLPNPFSLLMPSVSQSFSMGQS----------------------VQCHSEALEQILSRDDGSCVFDQAAIDSLTCDEDL 398          
BLAST of Ggra8967.t1 vs. uniprot
Match: Q7XY61 (Helicase (Fragment) n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XY61_GRIJA)

HSP 1 Score: 267 bits (682), Expect = 8.700e-85
Identity = 117/174 (67.24%), Postives = 142/174 (81.61%), Query Frame = 0
Query:   12 LHTRSSSPTPSLNPTWESRYEELLRWRAEHGDTCVPKAEGALGRWVARQRELKRTGKLDGTREQALNSINFVWNTVTAMWEERFRKLSEWKKQHGHCAVPIAQGELGTWVSKQRQLRKRGKLSKEKIDALDSLKFTWSTAEADWEDKFKRLVEWTRERGHASVPFNEGELGWWV 185
            +H  ++  +P   PTW++RY++LL+WR  HGDTCVPKAEG LGRWV+RQRELKRTGKL   REQ LN I+FVWNTVTA W++RF +L  WK  +GHCAVPIA GELGTWVSKQRQLRKRGKLS +K+  L SL+FTWST + +WE+KF+RL+E+ R+RGH  VPFNEGE GWWV
Sbjct:   19 VHFDTTLSSPIDKPTWDARYQQLLQWRQHHGDTCVPKAEGPLGRWVSRQRELKRTGKLSAEREQRLNDIDFVWNTVTAKWQDRFHRLRAWKNANGHCAVPIAHGELGTWVSKQRQLRKRGKLSSDKVALLSSLEFTWSTKDEEWEEKFRRLLEYRRKRGHVCVPFNEGEWGWWV 192          
BLAST of Ggra8967.t1 vs. uniprot
Match: A0A2V3INV3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INV3_9FLOR)

HSP 1 Score: 231 bits (588), Expect = 4.020e-68
Identity = 105/188 (55.85%), Postives = 129/188 (68.62%), Query Frame = 0
Query:   27 WESRYEELLRWRAEHGDTCVPKAEGALGRWVARQRELKRTGKLDGTREQALNSINFVWNTVTAMWEERFRKLSEWKKQHGHCAVPIAQGELGTWVSKQRQLRKRGKLSKEKIDALDSLKFTWSTAEADWEDKFKRLVEWTRERGHASVPFNEGELGWWVNTQRQCKRKGKLSASREARLQSLGFVWNP 214
            WE RY EL +W+  HG+  VPKAEG LGRWV RQREL +  KLD  R+  L+ + FVWNT  A WE R+  L  + + +GHC VPI+   LG WV+K R  R++ KL   ++  LD++ F W+TAEADW DKF +L+ +    GHA VPFNEGELGWWVNTQRQ KRKGKLSA RE  L   GF+WNP
Sbjct:   11 WERRYAELSQWKRLHGNCNVPKAEGKLGRWVVRQRELHKKAKLDLHRKAQLDRLGFVWNTNEAAWEHRYAHLLHYYRLNGHCCVPISDPNLGMWVAKMRANRRKDKLPLHRVRKLDAIGFIWNTAEADWMDKFNKLLHFRATEGHACVPFNEGELGWWVNTQRQSKRKGKLSAHRERLLNEAGFIWNP 198          
BLAST of Ggra8967.t1 vs. uniprot
Match: uncharacterized protein LOC123543777 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D5EBF (uncharacterized protein LOC123543777 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D5EBF)

HSP 1 Score: 198 bits (503), Expect = 1.140e-57
Identity = 93/196 (47.45%), Postives = 122/196 (62.24%), Query Frame = 0
Query:   27 WESRYEELLRWRAEHGDTCVPKAEGALGRWVARQRELKRTGKLDGTREQALNSINFVWNTVTAMWEERFRKLSEWKKQHGHCAVPIAQGELGTWVSKQRQLRKRGKLSKEKIDALDSLKFTWSTAEADWEDKFKRLVEWTRERGHASVPFNEGEL---GWWVNTQRQCKRKGKLSASREARLQSLGFVWNPSNSRS 219
            W+ R E L +W+ +HG   VPK  G LGRW +RQREL + G+L   R   L SI FVW+   + WE R+  L E+   H H  VP A   LG WV+K R  R+RGKLS+E+I  LD+L F WS +E++W +K++ L ++    GH SVPF +G+L   GWW NTQRQ +RKGK+SA R   L  +GFVW P    S
Sbjct:   13 WDQRLESLKQWKHQHGHCAVPKNAGLLGRWTSRQRELAKKGRLCNERLSELESIGFVWDANESAWEARYTSLLEYYNFHRHSCVPSAYPGLGIWVAKLRGKRRRGKLSQERIAKLDALDFVWSPSESEWMEKYQALKQFWNTHGHCSVPFRDGDLEKLGWWCNTQRQSRRKGKISAHRVRLLDQIGFVWKPQGVAS 208          
BLAST of Ggra8967.t1 vs. uniprot
Match: A0A1X6PGP3 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PGP3_PORUM)

HSP 1 Score: 202 bits (515), Expect = 3.290e-54
Identity = 92/189 (48.68%), Postives = 123/189 (65.08%), Query Frame = 0
Query:   27 WESRYEELLRWRAEHGDTCVPKAEGALGRWVARQRELKRTGKLDGTREQALNSINFVWNTVTAMWEERFRKLSEWKKQHGH-CAVPIAQGELGTWVSKQRQLRKRGKLSKEKIDALDSLKFTWSTAEADWEDKFKRLVEWTRERGHASVPFNEGELGWWVNTQRQCKRKGKLSASREARLQSLGFVWNP 214
            W  RY EL+ +  +HG   VPKAE ALGRWVARQRE  + G L   R   LN+++ +W+T   +WE R+R+L  W   + + C VPIA G LG+WV+KQRQ R + KLS E+++ L+++ F W T   DW ++F+ L+ W  + GH  VPFN G LGWWVN+QRQ  RK KL  SR  RL ++GF W P
Sbjct:   95 WGDRYLELVLYFRQHGHAAVPKAEDALGRWVARQREQLKKGLLTPDRIDLLNAVHMIWDTNEHLWELRYRQLVAWMAANDNSCCVPIASGCLGSWVAKQRQSRAKNKLSTERVERLEAIGFVWDTPANDWNERFQELIAWKAKYGHTRVPFNVGALGWWVNSQRQASRKNKLRTSRGDRLNAIGFAWYP 283          
BLAST of Ggra8967.t1 vs. uniprot
Match: A0A1X6P313 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P313_PORUM)

HSP 1 Score: 198 bits (503), Expect = 1.130e-52
Identity = 92/192 (47.92%), Postives = 124/192 (64.58%), Query Frame = 0
Query:   23 LNPTWESRYEELLRWRAEHGDTCVPKAEGALGRWVARQRELKRTGKLDGTREQALNSINFVWNTVTAMWEERFRKLSEWKKQHGHCAVPIAQGELGTWVSKQRQLRKRGKLSKEKIDALDSLKFTWSTAEADWEDKFKRLVEWTRERGHASVPFNEGELGWWVNTQRQCKRKGKLSASREARLQSLGFVWNP 214
            ++  W ++Y ELL W    G   VPK++G LGRWVARQREL +  +L+  RE+ALN +  VW+T    WE R ++L E+K+ HG   VPIA GELG W +KQRQL  +G+L + +   L  L F ++    DWE +F RL EW  + GH  VPF  GELGWWVNTQRQ  RKG+L  +R+A+L ++ F + P
Sbjct:    9 ISGRWCTKYGELLAWHRNRGTCSVPKSQGQLGRWVARQRELHKRDELEPARERALNLLGIVWDTNETQWELRVQQLLEYKRVHGTACVPIADGELGAWTAKQRQLHAKGRLLQARHARLADLGFVFNMPGNDWEAQFARLCEWKAKHGHTRVPFVAGELGWWVNTQRQADRKGRLLPTRKAKLDTIDFCFFP 200          
BLAST of Ggra8967.t1 vs. uniprot
Match: A0A7S1TJP9 (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TJP9_9RHOD)

HSP 1 Score: 187 bits (475), Expect = 1.250e-52
Identity = 90/194 (46.39%), Postives = 119/194 (61.34%), Query Frame = 0
Query:   27 WESRYEELLRWRAEHGDTCVPKAEGALGRWVARQRELKRTGKLDGTREQALNSINFVWNTVTAMWEERFRKLSEWKKQHGHCAVPIAQGELGTWVSKQRQLRKRGKLSKEKIDALDSLKFTWSTAEADWEDKFKRLVEWTRERGHASVPFNEGELGWWVNTQRQCKRKGKLSASREARLQSLGFVWNPS--NSR 218
            W+ R+EEL+ +   H    VPKA G LGRWVARQREL R GKL   R  AL S+ F W++    W  ++ +L    +  G   +    G+LG+WV+KQRQLR+RG LS+ +   LD + F W  AE +W+ K  +L  W ++ GH  VPF++GELG WVNTQRQ  R+GKL+  R   L  +GF WNP   NSR
Sbjct:   25 WKMRFEELVAFHQAHRHCIVPKAHGVLGRWVARQRELYRQGKLALVRVDALESLGFSWSSNDTAWMHKYAQLKTLAETSGSSVMRSTDGDLGSWVAKQRQLRRRGMLSESRRAMLDEIGFVWEFAEMEWDQKLAQLRAWVKQTGHTRVPFSQGELGRWVNTQRQMYRRGKLAHERYHILSEMGFDWNPKCFNSR 218          
BLAST of Ggra8967.t1 vs. uniprot
Match: K0QZZ9 (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0QZZ9_THAOC)

HSP 1 Score: 184 bits (468), Expect = 5.190e-48
Identity = 86/188 (45.74%), Postives = 113/188 (60.11%), Query Frame = 0
Query:   27 WESRYEELLRWRAEHGDTCVPKAEGALGRWVARQRELKRTGKLDGTREQALNSINFVWNTVTAMWEERFRKLSEWKKQHGHCAVPIAQGELGTWVSKQRQLRKRGKLSKEKIDALDSLKFTWSTAEADWEDKFKRLVEWTRERGHASVPFNEGELGWWVNTQRQCKRKGKLSASREARLQSLGFVWNP 214
            W+ RY EL  +R +HGD  VP+++G LG WV RQR+  + GKL   R   L SI FVW  +   W  RF +L ++K +HG C VP +QG LG WV+ QRQ  K GK+S+E+I  L+S+ F W   E DW D+F  L  +  E G  +VPF  G LG WV  QR   +KG +S  R   L+ +GFVW P
Sbjct:  168 WDWRYRELKEYREKHGDCNVPQSQGPLGDWVNRQRQRYKRGKLSRERLDLLESIGFVWEPLDEAWMARFDELVDFKNEHGDCNVPDSQGPLGAWVNYQRQCYKEGKMSQERIQFLESIGFVWDQLEQDWSDRFDELKNYKDENGDCNVPFRLGSLGEWVGWQRNSYKKGMMSQERVDLLEGIGFVWEP 355          
BLAST of Ggra8967.t1 vs. uniprot
Match: A0A7S0XHT5 (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XHT5_9RHOD)

HSP 1 Score: 165 bits (417), Expect = 4.600e-45
Identity = 79/164 (48.17%), Postives = 105/164 (64.02%), Query Frame = 0
Query:   51 GALGRWVARQRELKRTGKLDGTREQALNSINFVWNTVTAMWEERFRKLSEWKKQHGHCAVPIAQGELGTWVSKQRQLRKRGKLSKEKIDALDSLKFTWSTAEADWEDKFKRLVEWTRERGHASVPFNEGELGWWVNTQRQCKRKGKLSASREARLQSLGFVWNP 214
            G LGRWVARQREL+R GKL   R Q L+SI F W++    W  ++++L    +Q G   V   + ELGTWV+KQRQLR+RG LS+++   LD + F W   E +W++K ++L  W     H+ VPF +GELG WV+TQRQ  R+GKLS  R   L  +GF WNP
Sbjct:    1 GVLGRWVARQRELRRAGKLAVERIQTLDSIGFTWSSNDTAWLVKYQQLKRLCEQKGCSFVRTTESELGTWVAKQRQLRRRGALSQDRRALLDQIGFVWDCLEVEWDEKVEQLKAWIYTNRHSRVPFTQGELGRWVHTQRQMFRRGKLSKERYQILTRVGFEWNP 164          
The following BLAST results are available for this feature:
BLAST of Ggra8967.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZ842.880e-17366.74Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QEH94.950e-13353.48Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
Q7XY618.700e-8567.24Helicase (Fragment) n=1 Tax=Griffithsia japonica T... [more]
A0A2V3INV34.020e-6855.85Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
uncharacterized protein LOC123543777 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D5EBF1.140e-5747.45uncharacterized protein LOC123543777 n=1 Tax=Merce... [more]
A0A1X6PGP33.290e-5448.68Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6P3131.130e-5247.92Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1TJP91.250e-5246.39Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
K0QZZ95.190e-4845.74Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S0XHT54.600e-4548.17Hypothetical protein (Fragment) n=1 Tax=Erythrolob... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005114Helicase-associatedPFAMPF03457HAcoord: 90..146
e-value: 2.7E-18
score: 66.2
coord: 152..210
e-value: 1.2E-15
score: 57.7
coord: 26..82
e-value: 4.3E-16
score: 59.1
NoneNo IPR availableGENE3D6.10.140.530coord: 26..80
e-value: 4.6E-15
score: 57.7
coord: 153..209
e-value: 5.4E-15
score: 57.5
coord: 90..144
e-value: 2.8E-16
score: 61.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availablePANTHERPTHR33418HELICASE-ASSOCIATEDcoord: 9..248

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:990444..991878 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8967.t1Ggra8967.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 990444..991878 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8967.t1 ID=Ggra8967.t1|Name=Ggra8967.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=443bp
MNASTDSRCSTLHTRSSSPTPSLNPTWESRYEELLRWRAEHGDTCVPKAE
GALGRWVARQRELKRTGKLDGTREQALNSINFVWNTVTAMWEERFRKLSE
WKKQHGHCAVPIAQGELGTWVSKQRQLRKRGKLSKEKIDALDSLKFTWST
AEADWEDKFKRLVEWTRERGHASVPFNEGELGWWVNTQRQCKRKGKLSAS
REARLQSLGFVWNPSNSRSRAANAAAAATAAAAAAAAAAAAAATATATSN
TVSSADTTPSCTPEKAEKSVCVHDAAAMMLFPNDLTLPAPYLKEEMELFG
DSCSAMCADVLLADMGAAAGGNELMGSGMAGESLLQSQWGGSILSSPLFG
DNSAAAAAAAMNVGAQPLGLGTGLMDGGQAFGMGMGMGMGMGMGMGMGMG
MGMGMGSIVPSAADDLEQILSRDHGCVLDQSTIDSLTCEEQL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005114Helicase_assoc