Ggra8961.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8961.t1
Unique NameGgra8961.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length560
Homology
BLAST of Ggra8961.t1 vs. uniprot
Match: A0A2V3INM3 (DNA polymerase iota n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INM3_9FLOR)

HSP 1 Score: 716 bits (1848), Expect = 3.880e-254
Identity = 375/560 (66.96%), Postives = 433/560 (77.32%), Query Frame = 0
Query:    2 KRPRPTTARGIIALDLDCFYASVAIRARPHLKEKPVVIVQKHLCVTSNYIARSRAKGAVQKMTPVSQALKKCPELVCIDGSDLTPFREASLEVLTVIRAWLLERARTVSTALNSDPPVCPCQRLGFDEVFIDVTNLIEAQIEKGGAPFLFKGNVFGMTENDEARRYLMVASQIAHDLRAHVIERTQLTLCAGISDSKQLAKLAVNMHKPNDQTTFLPGKSAEYISTLSPRALMGFGHSTYEKIAAWTKEHAKGTPIETVAHVLLLFG-GLSGLRQLEDITGNENHARHLLDLCRGVDTTEIVDSGDAPKSISAEDSCRNCDNMKDVNRRLTIQITRLVSRLRNDGILYSRRPRTLTVSYRFRGDGFVGTTRSVPMPMEIVSVCCSRESRAISKAIEGIRRTALDVLEEHAGVCTRNKFDLTLLAVGANNFTGIRATSGNGSIEDISKFFSKPTGNDKDVPRKPVVLQSGSSLGPSLAGRLTSRREGTKDDTERTNDSESVAEARCPICNTKLSGDNLKQNNHIDNCLK--VVSLTQGNGSSKKRRKQSKVRTVDSYFAKR 558
            KR RP T+R IIA DLDCFYASVAIRARPHLK+KPVVIVQKHLCVTSNY+ARSRAKGAVQKMTPVS AL+KCPELVCIDGSDLTPFREASLEV+T IRAWL +RAR  +   N+ PP C CQRLGFDEVFIDVT L  ++IE GGAPFLF+G+VFG T++DE RR LMVASQ++H LR ++I +TQLTLCAGIS SKQLAKLAVNM+KPNDQT FLP +SAEY+ TLSPRAL GFGH T++KI  WTK + K   IETVA VL LFG G  G+R+L  I GNE HA H+L+LCRGVD TE++DSGDAPKSISAEDSCR+C  M+DV+RRL +QITRLVSRLR+DG L+SRRPR L+VSYRFRGDGFVGT+RSVPMP EIVSVCCS++++AI KAIE I++TAL VL+EHAGV     FDLTLLAVGA+NF+   +  GNG   DIS+FF    G  K +       +S  +L  S      S      D  ER   S   AE RCPICN+KLSGDNL QNNHID CLK       +  GS K+ RK    RT+DSYF+KR
Sbjct:    6 KRQRPVTSRAIIAFDLDCFYASVAIRARPHLKDKPVVIVQKHLCVTSNYVARSRAKGAVQKMTPVSHALQKCPELVCIDGSDLTPFREASLEVVTAIRAWLADRAREAAAMSNTKPPFCACQRLGFDEVFIDVTELALSEIENGGAPFLFRGHVFGRTDDDELRRLLMVASQLSHQLREYLIAKTQLTLCAGISHSKQLAKLAVNMNKPNDQTVFLPDQSAEYLKTLSPRALQGFGHGTHDKIITWTKHNGKHEGIETVADVLQLFGDGQDGIRRLGTILGNEQHALHILNLCRGVDHTEVLDSGDAPKSISAEDSCRSCTTMEDVSRRLVVQITRLVSRLRSDGQLFSRRPRALSVSYRFRGDGFVGTSRSVPMPTEIVSVCCSQQNKAIPKAIESIKKTALSVLKEHAGVQEGRTFDLTLLAVGASNFSDSDSFKGNGLTTDISEFF---IGKAKRIDSGK--KKSSGTLHHSQTPTGVSNHVQRTDSKER---STPEAEVRCPICNSKLSGDNLMQNNHIDKCLKSSCTKRDKSAGSVKRARKSLGTRTLDSYFSKR 557          
BLAST of Ggra8961.t1 vs. uniprot
Match: R7QGB3 (DNA Polymerase Iota n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGB3_CHOCR)

HSP 1 Score: 506 bits (1304), Expect = 6.400e-172
Identity = 275/560 (49.11%), Postives = 371/560 (66.25%), Query Frame = 0
Query:    2 KRPRPTTARGIIALDLDCFYASVAIRARPHLKEKPVVIVQKHLCVTSNYIARSRAKGAVQKMTPVSQALKKCPELVCIDGSDLTPFREASLEVLTVIRAWLLERARTVSTALNSDPPVCPCQRLGFDEVFIDVTNLIEAQIEKGGAPFLFKGNVFGMTENDEARRYLMVASQIAHDLRAHVIERTQLTLCAGISDSKQLAKLAVNMHKPNDQTTFLPGKSAEYISTLSPRALMGFGHSTYEKIAAWTKEHAKGTPIETVAHVLLLFG-GLSGLRQLEDITGNENHARHLLDLCRGVDTTEIVDSGDAPKSISAEDSCRNCDNMKDVNRRLTIQITRLVSRLRNDGILYSRRPRTLTVSYRFRGDGFVGTTRSVPMPMEIVSVCCSRESRAISKAIEGIRRTALDVLEEHAGVCTRNKFDLTLLAVGANNFTGIRATSGNGSI--EDISKFFSKPTGNDKDVPRKPVVLQSGSSLGPSLAGRLTSRREGTKDDTERTNDSESVAEARCPICNTKLSGDNLKQNNHIDNCLKVVSLTQGNGSSKKRRKQSKVRTVDSYFAKR 558
            KRPR + +R I+ALDLDCFYA VAIR+RPHL  +PVVI+QKHLCVTSNY+AR  A GAVQKMTPVS ALK CP++VCIDGSDLTPFREA+ EVL VIRAWL   A+     + S P   PCQ+LGFDEVFIDV+ L+  Q+  GG P+ F+G++FG T++D +RR LMVASQ+A +LR  +  RT+LTLCAGIS+SK LAKLAVNM+KPNDQT FL G +A+YI+   PR+L GFG++   KI+AW K + K   I+T A V+  FG G  G   L  +  N++ AR +L+LC+G DT+ +++SGDAPKS+++ DS R+C  ++D  RR+TI+   +V+RLR D  LY RRP+TLTV +RFRGDG+  T R++PMP EIVS+C S+ + A  ++I  + R AL VL++HAGV   + FD+TL+++GA+ FT  +      S   E ++ FF+   G               SS+     GRL   R        R   S + + +RCPICN  LS    K + H+D CL+         + K+ +  S    VD++F ++
Sbjct:    6 KRPRASQSRAILALDLDCFYAQVAIRSRPHLANRPVVILQKHLCVTSNYVARRLAHGAVQKMTPVSTALKACPDIVCIDGSDLTPFREANAEVLAVIRAWL--HAKVTELGVGSFP--IPCQKLGFDEVFIDVSRLVAEQVTAGGRPWEFQGHIFGRTDDDASRRALMVASQLASELRKEITLRTKLTLCAGISESKLLAKLAVNMNKPNDQTIFLSGDAAQYIAGRHPRSLPGFGYAVEGKISAWAKRNGK-EDIKTAADVVQWFGDGKKGFASLAKVLDNDDQARKILELCQGTDTSPVIESGDAPKSLTSMDSFRSCTKIEDAERRVTIRAKDMVTRLRRDWELYGRRPKTLTVGFRFRGDGYHATMRAIPMPQEIVSLCSSKGADAADRSIIALSRAALFVLKDHAGVSASSTFDMTLISIGASAFTENKTEKNATSTKKETVASFFAPKEGKGM------------SSVCRPPNGRLLQNRSSPNP---RRPLSPNASFSRCPICNEVLSSLLAKASLHVDQCLRRSETVSP--ARKRSKTASNTFRVDTFFQRK 543          
BLAST of Ggra8961.t1 vs. uniprot
Match: A0A7S3ENM2 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ENM2_9RHOD)

HSP 1 Score: 216 bits (551), Expect = 2.450e-60
Identity = 162/459 (35.29%), Postives = 237/459 (51.63%), Query Frame = 0
Query:    8 TARGIIALDLDCFYASVAIRARPHLKEKPVVIVQKHLCVTSNYIARSRAKGAVQKMTPVSQALKKCPELVCIDGSDLTPFREASLEVLTVIRAWLLERARTVSTALNSDPPVCPCQRLGFDEVFIDVTNLIEAQIEKGGAPFLFKGNVF---------GMTENDEARRYLMVASQIAHDLRAHVIERTQLTLCAGISDSKQLAKLAVNMHKPNDQTTFLPGKSAEYISTLSPRALMGFGHSTYEKIAAWTKEHAK----GTPIETVAHVLLLFGGLSGLRQLEDITGNENHARHLLDLCRGVDTTEIVDSGDAPKSISAEDSCRNCDNMKDVNRRLTIQIT-RLVSRLRNDGILY-SRRPRTLTVSYRFRGDGFVGTTRSVPMPMEIVSVCCSRESRAISKAIEGIRRTALDVLEEHAGVCTRNKFDLTLLAVGANNFTGIRATSGNGSIEDISKFFSK 451
            T R +IA+DLDCFYA V I A+P L+EKPV + Q+H+ VT NYIAR   K   +K+   + A+K CPEL+ I+G DLT +R A+  V   +R             LN+       ++LG DE FID T+++   I+     + F+G V+            E+ E  R LMV SQ+A  LRA ++E ++LT CAG++ +K LAKLA NM+KPN QT+ +PG +  Y+S L  R L G G         W   H      G  ++T  H+   +     L QLE++ G++  A  L DL RG D TE+ ++  A K +S EDS ++     +V + LT+++   L  RL+ D  L+  RR  TL V +R         +RS P P                  ++ ++ + + VL+  +G+     F LTLL VGA NF  +    G G + D   FFS+
Sbjct:   45 TDRVVIAIDLDCFYAQVEIVAKPELREKPVAVTQQHIIVTCNYIAR---KFGCRKLMSTADAVKSCPELILINGEDLTRYRAANELVHQAVRG---------VCGLNTR-----IEKLGLDEFFIDATHIVNETIKSKSYNYNFEGFVYPAMDQLFEGSNAEDVETERALMVGSQLASRLRAKILEDSELTCCAGVASNKMLAKLAANMNKPNSQTSLMPGVAGSYVSDLPLRKLPGVG---------WKASHEFRQIFGDEVKTAGHLRSAYN----LPQLENLLGSKR-AAWLWDLARGEDRTEVKNTI-ATKIVSVEDSFKSAKTWGEV-QDLTLKLCGELKDRLKIDAELHPGRRASTLRVVFRKAKRN--RESRSTPFP---------------DLEVDALQHSMIHVLKA-SGIA--EPFHLTLLGVGACNFVNLVPQPGTGRLID---FFSR 447          
BLAST of Ggra8961.t1 vs. uniprot
Match: DNA polymerase iota isoform X4 n=1 Tax=Salvelinus namaycush TaxID=8040 RepID=UPI00190131BA (DNA polymerase iota isoform X4 n=1 Tax=Salvelinus namaycush TaxID=8040 RepID=UPI00190131BA)

HSP 1 Score: 190 bits (482), Expect = 3.590e-50
Identity = 158/510 (30.98%), Postives = 243/510 (47.65%), Query Frame = 0
Query:    2 KRPRPTTARGIIALDLDCFYASVAIRARPHLKEKPVVIVQKHLCVTSNYIARSRAKGAVQKMTPVSQALKKCPELVCIDGSDLTPFREASLEVLTVIRAWLLERARTVSTALNSDPPVCPC-QRLGFDEVFIDVTNLIEAQIEKG--GAPFLFKGNVFGMTENDE---ARRYLMVASQIAHDLRAHVIERTQLTLCAGISDSKQLAKLAVNMHKPNDQTTFLPGKSAEYISTLSP-RALMGFGHSTYEKIAAWTKEHAKGTPIETVAHVLLLFGGLSGLRQLEDITGNENHARHLLDLCRGVDTTEIVDSGDAPKSISAEDSCRNCDNMKDVNRRLTIQITRLVSRLRNDGILYSRRPRTLTVS---YRFRGDGFVGTTRSVPMPMEIVSVCCSRESRAISKAIEGIRRTALDVLEEHAGVCTRNKFDLTLLAVGANNFTGIRATSGNGSIEDISKFFSKPTGNDKDVPRKPVVLQSGS----SLGPSLAGRLTSRREGTKDDTERTNDS 497
            K P P   R I+  DLDCFYA V +   P L+  P+ I QK++ VT NY+AR      V K+  V+ A +KCP+LV + G DLT +RE S +V  ++ ++                  CP  +RLGFDE F+D+T ++E +IE+    A + ++G+V+ +  +D        L V S+IA +LRA +  +  LT CAGI+ SK LAKL     KPN QTT LP    + + +L+  R + G GH T +++ A      +   +  +A ++  FG               + A+ L +L  G+D T +  +G AP+S+S EDS +   +  +V +++   ++ ++ R+  DG    R+P TL ++   Y      F   +R  P+P  I     S    A+++ +      A+ +   H  V T   F LTLL V  +N     A    GSI   + FF+          R P   Q+ S     L  S+ G L   R     D E  N S
Sbjct:   37 KVPVPPVQRVILHFDLDCFYAQVEMIRNPALRNVPLGIQQKYIIVTCNYVARDLG---VTKLMLVTDAKEKCPQLVLVKGEDLTHYRETSYKVTELLMSF------------------CPLVERLGFDENFMDITEMVERRIEQNPESAHYSYEGHVYNLDTSDAKVMVHPRLAVGSRIAAELRAEIHSKLGLTGCAGIATSKLLAKLVSGAFKPNQQTTLLPESVKDIMGSLNGLRKVPGVGHQTAKRLQALGLVSVQDLQLFPLADLVREFG--------------VSTAQRLQNLALGIDDTPVTPTG-APQSLSDEDSFKKMSSTNEVWQKVKDLLSSILDRMHKDG----RQPLTLRLTIRRYSATNKWFSRESRQCPIPNHIGQKITSGNCDALAQLVS----MAMKLF--HKMVDTNTAFHLTLLNVCFSNLQAKCAAVSKGSI---ASFFTH---------RSPEKTQASSRCQEDLSQSVLGNL---RGQVGSDVEAGNSS 485          
BLAST of Ggra8961.t1 vs. uniprot
Match: DNA polymerase iota n=1 Tax=Thalassophryne amazonica TaxID=390379 RepID=UPI001471C0CD (DNA polymerase iota n=1 Tax=Thalassophryne amazonica TaxID=390379 RepID=UPI001471C0CD)

HSP 1 Score: 194 bits (492), Expect = 4.720e-50
Identity = 162/513 (31.58%), Postives = 248/513 (48.34%), Query Frame = 0
Query:    8 TARGIIALDLDCFYASVAIRARPHLKEKPVVIVQKHLCVTSNYIARSRAKGAVQKMTPVSQALKKCPELVCIDGSDLTPFREASLEVLTVIRAWLLERARTVSTALNSDPPVCPC-QRLGFDEVFIDVTNLIEAQIEKGGAPFL----FKGNVF-----GMTENDEARRYLMVASQIAHDLRAHVIERTQLTLCAGISDSKQLAKLAVNMHKPNDQTTFLPGKSAEYISTLSP-RALMGFGHSTYEKIAAWTKEHAKGTPIETVAHVLLLFGGLSGLRQLEDITGNENHARHLLDLCRGVDTTEIVDSGDAPKSISAEDSCRNCDNMKDVNRRLTIQITRLVSRLRNDGILYSRRPRTLTVS---YRFRGDGFVGTTRSVPMPMEIVSVCCSRESRAISKAIEGIRRTALDVLEEHAGVCTRNKFDLTLLAVGANNF-TGIRATSGNGSIEDISKFFSKPTGNDKDVPRKPVVLQSGSSLGPSLAGRLTSRREGTKDDTERTNDSESVAEARC 505
            T R I+  DLDCFYA V +   P L+  P+ I QK++ VT NY+AR +    + K+  +S A +KCP+LV ++G DLTP+RE S +V  ++ ++                  CP  +RLGFDE F+DVT ++E ++ +   P L    FKG+V+     G+T  D  R  L + S IA +LR  +     LT CAGI+ +K LAKL     KPN QT+ LP   ++ + +LS  R + G GH T +++ A      K   +  +A ++  FGG S              A  L +L  G+D + I  +G AP+S+S EDS +   + KDV  ++   ++ L+ R+  DG    R+P+T  ++   Y      F   +R  P+P        S     I  A+  +   A+ +   H  + +   F LTL+ V   N  T     SG GSI   + FF+K    D  + +   V Q+      S     T  R  T D T  +  +++ A+A C
Sbjct:   46 TKRVILHFDLDCFYAQVEMIRNPALRNVPLGIQQKNIMVTCNYVAREQG---ITKLMSLSDAKEKCPQLVLVNGEDLTPYREMSYKVTELLMSY------------------CPLVERLGFDENFMDVTEMVEKRLAQ--EPHLSSCSFKGHVYNHSSAGITAKDHPR--LSLGSHIAEELREKIYSELGLTGCAGIASNKLLAKLVSGTFKPNQQTSLLPENVSDLMCSLSSLRQVPGVGHQTAKRLQALGLVSVKELHVFPIADLVREFGGPS--------------AHRLKNLALGIDESVITPTG-APQSLSDEDSFKKISSTKDVLEKIQELLSSLLERMHKDG----RQPQTFRLTIRRYSATNKWFSRESRQCPIPNHTGQKITSGH---IVDAVVQLLPLAMKLF--HKMIDSSASFHLTLINVCFTNLQTKELPVSGKGSI---TAFFTK----DTSLRKSQNVSQNQEGSSQSAESHCTDHRFST-DCTITSPKTDTEADASC 501          
BLAST of Ggra8961.t1 vs. uniprot
Match: DNA polymerase iota-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001455C4A8 (DNA polymerase iota-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001455C4A8)

HSP 1 Score: 194 bits (493), Expect = 1.100e-49
Identity = 150/495 (30.30%), Postives = 251/495 (50.71%), Query Frame = 0
Query:    9 ARGIIALDLDCFYASVAIRARPHLKEKPVVIVQKHLCVTSNYIARSRAKGAVQKMTPVSQALKKCPELVCIDGSDLTPFREASLEVLTVIRAWLLERARTVSTALNSDPPVCPCQRLGFDEVFIDVTNLIEAQIEKGGAPFL-FKGNVFG--MTENDEA-----------RRYLMVASQIAHDLRAHVIERTQLTLCAGISDSKQLAKLAVNMHKPNDQTTFLPGKSAEYISTLSPRALM-GFGHSTYEKIAAWTKEHAKGTPIETVAHVLLLFGGLSGLRQLEDITGNENHARHLLDLCRGVDTTEIVDSGDAPKSISAEDSCRNCDNMKDVNRRLTIQITRLVSRLRNDGILYSRRPRTLTVSYR--FRGDGFVGTTRSVPMPMEIVSVCCSRESRAISKAIEGIRRTALDVLEEHAGVCTRNKFDLTLLAVGANNFTGIRATSGNGSIEDISKFFSKPTGNDKDVPRKPVVLQSGSSL-GPSLAGRLTSRRE 485
            +R I+ +DLDC+YA V +   P L+ KP+ I QK+L VT NY+ARS     V K+  +++ALK+CP+LV + G DLT +RE S ++  ++  +               P V   +RLGFDE F+DVT L+E ++ +GG       G+ +G   +E+D A              L++ S IA ++R  +  +  LT CAG++ +K LAKL    HKPNDQTT  P  ++  +  L+    + G G+S+ +K+A           I T+  ++     L     L+D  G +  A  +L LC+G+D + +V SG  P+SIS EDS R C  +++   +++  +  L  RL  DG    R+P TL ++ R   +   +   +R  P+P  ++    S E+  + K ++        +++          F LTL++VG   F   +  +   S+ DISKFF+ P    + +  + ++    +++ G   + RL + +E
Sbjct:   54 SRTIVHIDLDCYYAQVEMVRNPSLRSKPLGIQQKYLLVTCNYVARSHG---VTKLMRITEALKRCPDLVIVSGEDLTHYREMSYKITGILHQF--------------SPLV---ERLGFDENFVDVTGLVEKRLMQGGIEEAEVIGHQYGEQSSESDSAFTRPHDCTCGCHHRLLIGSHIAQEMRQALNIQLGLTSCAGVAHNKLLAKLVGTTHKPNDQTTLWPSMTSHLMGRLTKATQVPGIGYSSGKKLAL--------LGITTLTELIEAPFSL-----LKDEFGYQT-ASIMLKLCQGIDESPVVQSG-PPQSISDEDSFRKCSTLQEAQLKISTLLKSLSQRLLKDG----RQPHTLRLAVRKYSKTHKWSRESRQCPVPDGMLHSLQSDEATVLDKLLDLCSSLFYKMVD------VSQPFHLTLISVG---FAKFQTPTTKTSVSDISKFFT-PRSEKRGLVNESIIKDGCTNITGDGDSNRLETTQE 499          
BLAST of Ggra8961.t1 vs. uniprot
Match: DNA polymerase iota-like isoform X1 n=3 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D9001A (DNA polymerase iota-like isoform X1 n=3 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D9001A)

HSP 1 Score: 193 bits (491), Expect = 1.480e-49
Identity = 151/459 (32.90%), Postives = 235/459 (51.20%), Query Frame = 0
Query:   10 RGIIALDLDCFYASVAIRARPHLKEKPVVIVQKHLCVTSNYIARSRAKGAVQKMTPVSQALKKCPELVCIDGSDLTPFREASLEVLTVIRAWLLERARTVSTALNSDPPVCPCQRLGFDEVFIDVTNLIEAQIEKGGAPFLFKGNVFGMTENDEA---------------RRYLMVASQIAHDLRAHVIERTQLTLCAGISDSKQLAKLAVNMHKPNDQTTFLPGKSAEYISTLSP-RALMGFGHSTYEKIAAWTKEHAKGTPIETVAHVLLLFGGLSGLRQLEDITGNENHARHLLDLCRGVDTTEIVDSGDAPKSISAEDSCRNCDNMKDVNRRLTIQITRLVSRLRNDGILYSRRPRTLTVSYR--FRGDGFVGTTRSVPMPMEIVSVCCSRESRAISKAIEGIRRTALDVLEEHAGVCTRNKFDLTLLAVGANNFTGIRATSGNGSIEDISKFFS 450
            R II +DLDC+YA V +   P L+ KP+ I QK+L VT NY+AR+R    V K+  ++ AL++CP+LV ++G DLT +RE S  +  +++ +               P V   +RLGFDE FIDV++L+  ++++        G+V+G T  +                  + L++AS IAH++R  +  +  LT CAG++ +K LAKL  + HKPNDQTT  P      +++L+    + G GHST +K+++          I T+  ++      + L  L++  G +  A  +  LC+G D + +V SG  P+SIS EDS R C ++++   ++   +  L+ RLR DG    R+P TL +S R   R   +   +R   MP  I+    S E    SK ++      L V   H  V T   F LTL++V    F     T+      DI+KFFS
Sbjct:   82 RTIIHIDLDCYYAQVEMVRNPALRTKPLGIQQKYLLVTCNYVARARG---VTKLMRITDALQRCPDLVIVNGEDLTHYREMSYRITELLQQF--------------SPLV---ERLGFDENFIDVSHLVSQRLQREEGRTEVFGHVYGETATNSVVAIETNSPPICTCGCHQRLLLASHIAHEMREALWTQLGLTSCAGVAHNKLLAKLVGSTHKPNDQTTLYPHMLGSLMASLTKVTQVPGIGHSTGKKLSSM--------GITTLDQLIE-----APLSVLKEEFGYQT-ACTMQKLCQGHDESPVVQSG-PPQSISDEDSFRKCSSLQEAQVKMKALLCSLLQRLRKDG----RQPHTLRLSVRKYSRVHKWTRESRQCGMPDGILHSLQSDEDGTASKLLD------LCVGLFHKMVDTSQPFHLTLISVCFAKFQSQSRTTS-----DITKFFS 490          
BLAST of Ggra8961.t1 vs. uniprot
Match: A0A3B4Y019 (Ras-related protein Rab-27B-like n=4 Tax=Seriola TaxID=8160 RepID=A0A3B4Y019_SERLL)

HSP 1 Score: 192 bits (487), Expect = 2.010e-49
Identity = 152/465 (32.69%), Postives = 233/465 (50.11%), Query Frame = 0
Query:    4 PRPTTARGIIALDLDCFYASVAIRARPHLKEKPVVIVQKHLCVTSNYIARSRAKGAVQKMTPVSQALKKCPELVCIDGSDLTPFREASLEVLTVIRAWLLERARTVSTALNSDPPVCPC-QRLGFDEVFIDVTNLIEAQIEKG--GAPFLFKGNVFGMTEND-EARRYLMVA--SQIAHDLRAHVIERTQLTLCAGISDSKQLAKLAVNMHKPNDQTTFLPGKSAEYISTLSP-RALMGFGHSTYEKIAAWTKEHAKGTPIETVAHVLLLFGGLSGLRQLEDITGNENHARHLLDLCRGVDTTEIVDSGDAPKSISAEDSCRNCDNMKDVNRRLTIQITRLVSRLRNDGILYSRRPRTLTVS---YRFRGDGFVGTTRSVPMPMEIVSVCCSRESRAISKAIEGIRRTALDVLEEHAGVCTRNKFDLTLLAVGANNF-TGIRATSGNGSIEDISKFFSKPTGNDK 457
            P P+ +R I+  DLDCFYA V +   P L+E P+ I QK++ VT NY+AR +    V K+  V+ A +KCP+LV + G DLT +RE S ++  ++ ++                  CP  +RLGFDE F+DVT ++E ++ +      F FKG+V+     D +A  YL +A  S IA +LR  +  +  LT CAGI+ +K LAKL     KPN QTT LP   ++ +  LS  R + G GH T +++ A      +   +  +  ++  FG  S              A+ L +L  G+D + +  +G AP+S+S EDS +   + KDV  ++   ++ LV R+  DG    R+P+T  ++   Y      F   +R  P+P  I     S  S     A+  +   A+ +   H  V +   F LTL+ V  +N  T   A SG GSI   + FF++ T   K
Sbjct:   42 PTPSPSRVILHFDLDCFYAQVEMIRNPALREVPLGIQQKYIIVTCNYVAREQG---VTKLMSVTDAKEKCPQLVLVKGEDLTHYREMSYKMTELLMSY------------------CPLVERLGFDENFMDVTEMVERRLAQTPESNSFSFKGHVYSRLSADVKASDYLRLALGSHIAAELREAIHSKLGLTGCAGIATNKLLAKLVSGTFKPNQQTTLLPENLSDILGCLSSLRKVPGIGHQTAKRLQALGLVSIQDLQLFPLNDLVKEFGHPS--------------AQRLKNLAVGIDDSPVTPTG-APQSLSDEDSFKKMSSTKDVLEKIQQLLSSLVERMNKDG----RQPQTFRLTIRRYSATNKWFSRESRQCPIPNHIGQKITSGSS---DDAVAQLVPVAMKLF--HKMVDSNTAFHLTLINVCFSNLQTRGAAVSGKGSI---TSFFTQTTSPSK 458          
BLAST of Ggra8961.t1 vs. uniprot
Match: A0A672T306 (DNA polymerase iota n=2 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=A0A672T306_SINGR)

HSP 1 Score: 188 bits (477), Expect = 2.410e-49
Identity = 145/452 (32.08%), Postives = 232/452 (51.33%), Query Frame = 0
Query:   10 RGIIALDLDCFYASVAIRARPHLKEKPVVIVQKHLCVTSNYIARSRAKGAVQKMTPVSQALKKCPELVCIDGSDLTPFREASLEVLTVIRAWLLERARTVSTALNSDPPVCPC-QRLGFDEVFIDVTNLIEAQIEKGGAPFL-FKGNVF---GMTENDEARRYLMVASQIAHDLRAHVIERTQLTLCAGISDSKQLAKLAVNMHKPNDQTTFLPGKSAEYISTLSPRALM-GFGHSTYEKIAAWTKEHAKGTPIETVAHVLLLFGGLSGLRQLEDITGNENHARHLLDLCRGVDTTEIVDSGDAPKSISAEDSCRNCDNMKDVNRRLTIQITRLVSRLRNDGILYSRRPRTLTVS---YRFRGDGFVGTTRSVPMPMEI-VSVCCSRESRAISKAIEGIRRTALDVLEEHAGVCTRNKFDLTLLAVGANNFTGIRATSGNGSIEDISKFFSK 451
            R I+ +DLDCFYA V +   P L+ KP+ I QK+L VT NY+AR      V K+  V+ A++KCP+LV + G DLT +RE S +V  ++ ++                  CP  +RLGFDE F+DVT ++E ++++     L F G+V+    M  ++E  R L V S IA ++R  +     LT CAGI+++K LAKL     KPN QTT LP  +AE +S+L+    + G G+ T EK+ A      +   + ++A ++  FG ++              A+ + +L  G+D + +  +G  P+S+S EDS +    +++V ++    +T L  R+  DG    RRP T  ++   Y      F   +R  P+P    + + C   S A+ + +       L +   H  + TR  F LTLL V    F+ ++A S + S   I+ FF++
Sbjct:   36 RVILHIDLDCFYAQVEMIRNPALRNKPLGIQQKYLIVTCNYVAREHG---VNKLMSVTDAVEKCPQLVLVKGEDLTHYREMSYKVTELLMSY------------------CPLVERLGFDENFMDVTEMVERRLKETCISDLSFNGHVYKHESMAVDEENAR-LAVGSVIAAEMRQAIFSTLGLTGCAGIANNKLLAKLVAGTFKPNQQTTLLPYSTAELMSSLTGLIKVPGIGYKTREKLKALGLVSVRDLQLYSLADLVREFGEVT--------------AKRIQNLACGIDDSPVTPAG-PPQSLSDEDSFKKISTLEEVQKKTEELLTSLTERMHKDG----RRPHTFRLTIRQYTVTNRWFSRESRQCPIPNHTGLKITCG-SSEAVPQLL------GLSMKLFHKMLDTREPFHLTLLNVC---FSNLQAKSSSKS--SIASFFTQ 434          
BLAST of Ggra8961.t1 vs. uniprot
Match: DNA polymerase iota isoform X3 n=1 Tax=Oreochromis aureus TaxID=47969 RepID=UPI0019546923 (DNA polymerase iota isoform X3 n=1 Tax=Oreochromis aureus TaxID=47969 RepID=UPI0019546923)

HSP 1 Score: 186 bits (473), Expect = 2.970e-49
Identity = 154/467 (32.98%), Postives = 232/467 (49.68%), Query Frame = 0
Query:    2 KRPRPTTARGIIALDLDCFYASVAIRARPHLKEKPVVIVQKHLCVTSNYIARSRAKGAVQKMTPVSQALKKCPELVCIDGSDLTPFREASLEVLTVIRAWLLERARTVSTALNSDPPVCPC-QRLGFDEVFIDVTNLIEAQIEKGGA--PFLFKGNVFGMTEND-EARRY--LMVASQIAHDLRAHVIERTQLTLCAGISDSKQLAKLAVNMHKPNDQTTFLPGKSAEYISTL-SPRALMGFGHSTYEKIAAWTKEHAKGTPIETVAHVLLLFGGLSGLRQLEDITGNENHARHLLDLCRGVDTTEIVDSGDAPKSISAEDSCRNCDNMKDVNRRLTIQITRLVSRLRNDGILYSRRPRTLTVS---YRFRGDGFVGTTRSVPMPMEIVSVCCSRESRAISKAIEGIRRTALDVLEEHAGVCTRNKFDLTLLAVGANNF-TGIRATSGNGSIEDISKFFSKPTGNDK 457
            K P P   R I+  DLDCFYA V +   P L+E P+ I QK++ VT NY+AR R    V K+  V+ A +KCPELV + G DLT +RE S ++  ++ ++                  CP  +RLGFDE F+DVT ++E ++ +      F +KG+V+     D +A +Y  L + S IA +LR  V  +  LT CAGI+ +K LAKL     KPN QTT LP   ++ +  L S R + G GH T +++ A      K   +  +  ++  FG  +              A+ L +L  GVD + +  +G AP+S+S EDS +   + K+V+ +    ++ LV R+  DG    R+P+T  ++   Y      F   +R  P+P  I    CS  S     A+  +   A+ +   +  V     F LTL+ V  +N  T   A +G GSI   + FFS+ T   K
Sbjct:   37 KTPVPAH-RVILHFDLDCFYAQVEMIRNPALREVPLGIQQKYIIVTCNYVARERG---VNKLMSVTDAKEKCPELVLVKGEDLTHYREMSYKMTELLMSY------------------CPLVERLGFDENFMDVTEMVEQRLAQTVKFEDFSYKGHVYNHPSADVKASKYPRLALGSHIAGELREAVHSKLGLTGCAGIATNKLLAKLVSGTFKPNQQTTLLPENISDIMGCLGSVRKVPGVGHQTAKRLQALGLVSVKDLQLCPLNDLVKEFGSPT--------------AQRLKNLALGVDDSPVTCTG-APQSLSDEDSFKKMSSTKEVSEKTQQLLSSLVERMHKDG----RQPQTFRLTIRKYTTTNKWFSRESRQCPIPNHIGQKICSGSS---DDAVMQLLPLAMKLF--YRMVDYSAPFHLTLINVCFSNLQTRAAAVTGKGSI---TSFFSRGTSPKK 454          
The following BLAST results are available for this feature:
BLAST of Ggra8961.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3INM33.880e-25466.96DNA polymerase iota n=1 Tax=Gracilariopsis chorda ... [more]
R7QGB36.400e-17249.11DNA Polymerase Iota n=1 Tax=Chondrus crispus TaxID... [more]
A0A7S3ENM22.450e-6035.29Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
DNA polymerase iota isoform X4 n=1 Tax=Salvelinus namaycush TaxID=8040 RepID=UPI00190131BA3.590e-5030.98DNA polymerase iota isoform X4 n=1 Tax=Salvelinus ... [more]
DNA polymerase iota n=1 Tax=Thalassophryne amazonica TaxID=390379 RepID=UPI001471C0CD4.720e-5031.58DNA polymerase iota n=1 Tax=Thalassophryne amazoni... [more]
DNA polymerase iota-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001455C4A81.100e-4930.30DNA polymerase iota-like n=1 Tax=Asterias rubens T... [more]
DNA polymerase iota-like isoform X1 n=3 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D9001A1.480e-4932.90DNA polymerase iota-like isoform X1 n=3 Tax=Patiri... [more]
A0A3B4Y0192.010e-4932.69Ras-related protein Rab-27B-like n=4 Tax=Seriola T... [more]
A0A672T3062.410e-4932.08DNA polymerase iota n=2 Tax=Sinocyclocheilus graha... [more]
DNA polymerase iota isoform X3 n=1 Tax=Oreochromis aureus TaxID=47969 RepID=UPI00195469232.970e-4932.98DNA polymerase iota isoform X3 n=1 Tax=Oreochromis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017961DNA polymerase, Y-family, little finger domainPFAMPF11799IMS_Ccoord: 308..437
e-value: 3.8E-12
score: 46.7
IPR001126UmuC domainPFAMPF00817IMScoord: 15..205
e-value: 2.7E-30
score: 105.3
IPR001126UmuC domainPROSITEPS50173UMUCcoord: 12..237
score: 27.640003
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 80..216
e-value: 3.6E-23
score: 84.3
NoneNo IPR availableGENE3D3.40.1170.60coord: 19..79
e-value: 2.2E-16
score: 61.2
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 499..528
e-value: 2.4E-5
score: 25.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 482..498
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 453..498
NoneNo IPR availablePANTHERPTHR46404DNA POLYMERASE IOTAcoord: 6..464
IPR036775DNA polymerase, Y-family, little finger domain superfamilyGENE3D3.30.1490.100coord: 308..435
e-value: 6.6E-18
score: 67.1
IPR036775DNA polymerase, Y-family, little finger domain superfamilySUPERFAMILY100879Lesion bypass DNA polymerase (Y-family), little finger domaincoord: 309..430
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 8..282

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:980102..981781 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8961.t1Ggra8961.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 980102..981781 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8961.t1 ID=Ggra8961.t1|Name=Ggra8961.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=560bp
MKRPRPTTARGIIALDLDCFYASVAIRARPHLKEKPVVIVQKHLCVTSNY
IARSRAKGAVQKMTPVSQALKKCPELVCIDGSDLTPFREASLEVLTVIRA
WLLERARTVSTALNSDPPVCPCQRLGFDEVFIDVTNLIEAQIEKGGAPFL
FKGNVFGMTENDEARRYLMVASQIAHDLRAHVIERTQLTLCAGISDSKQL
AKLAVNMHKPNDQTTFLPGKSAEYISTLSPRALMGFGHSTYEKIAAWTKE
HAKGTPIETVAHVLLLFGGLSGLRQLEDITGNENHARHLLDLCRGVDTTE
IVDSGDAPKSISAEDSCRNCDNMKDVNRRLTIQITRLVSRLRNDGILYSR
RPRTLTVSYRFRGDGFVGTTRSVPMPMEIVSVCCSRESRAISKAIEGIRR
TALDVLEEHAGVCTRNKFDLTLLAVGANNFTGIRATSGNGSIEDISKFFS
KPTGNDKDVPRKPVVLQSGSSLGPSLAGRLTSRREGTKDDTERTNDSESV
AEARCPICNTKLSGDNLKQNNHIDNCLKVVSLTQGNGSSKKRRKQSKVRT
VDSYFAKRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017961DNA_pol_Y-fam_little_finger
IPR001126UmuC
IPR043128Rev_trsase/Diguanyl_cyclase
IPR036775DNA_pol_Y-fam_lit_finger_sf
IPR043502DNA/RNA_pol_sf