Ggra8956.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8956.t1
Unique NameGgra8956.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length157
Homology
BLAST of Ggra8956.t1 vs. uniprot
Match: A0A2V3IRA1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRA1_9FLOR)

HSP 1 Score: 200 bits (509), Expect = 1.970e-63
Identity = 100/148 (67.57%), Postives = 119/148 (80.41%), Query Frame = 0
Query:   10 AFTQAAPVSGSCLQKTLRCV-RRARPRVALMTLHPQDLSWRSERDRHAVESEFISIRLDGKVDADMAMLRERMQMLGQKEKQWADICHQFLSFSMLTGLPLIDRDTGEPTFRAWILFSLSAAVPLYMVALVLNWFHTTSVSFGSALPL 156
            AF  +AP+S +   +T R V RR RPR A MT+HPQDLSWR+ERDR A+ESEFIS R  G+VDADMAMLRERMQ+LG+KEKQW  IC QFLS SMLTG+ L+DR TGEPT RAWI F++SAA+PLY+VAL + W H++SVSF  ALPL
Sbjct:   10 AFAPSAPLSTALTPRTARFVSRRVRPRTAQMTIHPQDLSWRNERDRLAIESEFISSRDSGEVDADMAMLRERMQLLGKKEKQWTQICEQFLSLSMLTGVALVDRHTGEPTARAWIFFTISAALPLYVVALAVQWLHSSSVSFSHALPL 157          
BLAST of Ggra8956.t1 vs. uniprot
Match: A0A1X6P0H1 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P0H1_PORUM)

HSP 1 Score: 68.6 bits (166), Expect = 8.540e-12
Identity = 35/87 (40.23%), Postives = 49/87 (56.32%), Query Frame = 0
Query:   70 VDADMAMLRERMQMLGQKEKQWADICHQFLSFSMLTGLPLIDRDTGEPTFRAWILFSLSAAVPLYMVALVLNWFHTTSVSFGSALPL 156
            VD DM  LRER+Q+L  +E++WA +  Q      L+GL L D   GEPT  AW+  +LS AVP+Y++ +      T + S     PL
Sbjct:   57 VDEDMGGLRERLQLLSTREREWAGVKEQLADLERLSGLTLTDAG-GEPTAAAWVFCALSLAVPVYLLWVAYGGLATAAGSLSGTTPL 142          
BLAST of Ggra8956.t1 vs. uniprot
Match: A0A5J4YVY2 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVY2_PORPP)

HSP 1 Score: 60.1 bits (144), Expect = 1.200e-7
Identity = 23/60 (38.33%), Postives = 41/60 (68.33%), Query Frame = 0
Query:   77 LRERMQMLGQKEKQWADICHQFLSFSMLTGLPLIDRDTGEPTFRAWILFSLSAAVPLYMV 136
            LRER+++    ++QWA+IC  F++   ++G+ L+DR +G P+F+AW+   L   VP+ +V
Sbjct:  402 LRERIELQATTQRQWAEICAMFVTLEGMSGIELMDRKSGNPSFKAWVFVLLWWTVPIGLV 461          
The following BLAST results are available for this feature:
BLAST of Ggra8956.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IRA11.970e-6367.57Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6P0H18.540e-1240.23Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4YVY21.200e-738.33Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 144..156
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 91..110
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 111..121
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 122..143
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..90
NoneNo IPR availableTMHMMTMhelixcoord: 121..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:968287..968757 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8956.t1Ggra8956.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 968287..968757 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8956.t1 ID=Ggra8956.t1|Name=Ggra8956.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=157bp
MSTFSACQTAFTQAAPVSGSCLQKTLRCVRRARPRVALMTLHPQDLSWRS
ERDRHAVESEFISIRLDGKVDADMAMLRERMQMLGQKEKQWADICHQFLS
FSMLTGLPLIDRDTGEPTFRAWILFSLSAAVPLYMVALVLNWFHTTSVSF
GSALPL*
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