Ggra8949.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8949.t1
Unique NameGgra8949.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length265
Homology
BLAST of Ggra8949.t1 vs. uniprot
Match: A0A2V3INQ6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INQ6_9FLOR)

HSP 1 Score: 357 bits (916), Expect = 4.810e-122
Identity = 175/243 (72.02%), Postives = 203/243 (83.54%), Query Frame = 0
Query:   20 IFKKRKRPGNMRTRKRQKPPPQEESGEIGEEARVKLVQLKTRGPRKKSTTGWHREQFSTNIEQLVSNDATAERTDTGGEAVSSKQSKRPFGPMKAPAHLRASVRVDYQPDVCKDYKETGYCGFGDSCKFLHDRSDYKAGWQLERDWAEKEKKKRDALLRGEDPDAEEANRNKEEYDKDGLPFACFLCREEFKSPVMTLCEHYFCEECALSRMEKDHSCPICKKQLRDTLNPAPKLIAKLELKH 262
            +FKKR R G  +TRKR +P    + GE   ++RVKL Q KT+  +K++++ W RE FST  E   + +ATAER D GG+    K  K+ FGPM+APAHLRASVRVDYQPDVCKDYKETGYCGFGDSCKFLHDRSDYKAGWQLERDWAEKEK+KRDALLRGE+P+ E+AN  KEEYD+DGLPFACFLCREEFKSP+ TLC+HYFCE+CAL+RMEKD +CPICKKQLRDTLNPAPKLIAKL+LKH
Sbjct:   20 VFKKRARSGATKTRKRTRPV---DDGET--DSRVKLPQQKTKVAKKRNSS-WQRELFSTGAESAPTQNATAERGDVGGDEAPPKTKKKAFGPMRAPAHLRASVRVDYQPDVCKDYKETGYCGFGDSCKFLHDRSDYKAGWQLERDWAEKEKRKRDALLRGENPNNEDANEKKEEYDEDGLPFACFLCREEFKSPIKTLCDHYFCEKCALARMEKDSTCPICKKQLRDTLNPAPKLIAKLQLKH 256          
BLAST of Ggra8949.t1 vs. uniprot
Match: R7QEF1 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEF1_CHOCR)

HSP 1 Score: 273 bits (699), Expect = 4.200e-89
Identity = 141/250 (56.40%), Postives = 179/250 (71.60%), Query Frame = 0
Query:   14 EKHENTIFKKRKRPGNMRTRKRQKPPPQEESGEIGEEARVKLVQLKTRGPRKKSTTGWHREQFSTNIE-QLVSNDATAERTDTGGEAVSSKQSKRPFGPMKAPAHLRASVRVDYQPDVCKDYKETGYCGFGDSCKFLHDRSDYKAGWQLERDWAEKEKKKRDALLRGEDPDAE-EANRNKEEYDKDGLPFACFLCREEFKSPVMTLCEHYFCEECALSRMEKDHSCPICKKQLRDTLNPAPKLIAKLELK 261
            EK    I KKR R  +   R+R +   +E     G++  ++LV     G RK+    W R  FS N +    S  ATA R D GGEA    + K+PFGPM+APAH+R SVRVDYQ D+CKDYKETGYCGFGDSCKFLHDRSDYKAGWQLERDWAEKEK +R+ ++RGE+PD E + N ++++ D+DGLPFAC++CR +FK+PV+T+C HYFCE+CAL R+ KD +C IC+KQL  TLN A KL+AKL+ K
Sbjct:    7 EKRSAVILKKRSRTSS---RRRVRVSTEENDDATGKQG-LELVAKDRIGKRKRKE--WERPHFSANGKLSEPSAIATAVREDIGGEANPHNKRKKPFGPMQAPAHIRTSVRVDYQADICKDYKETGYCGFGDSCKFLHDRSDYKAGWQLERDWAEKEKLRREKVIRGENPDEESQGNESQKDLDEDGLPFACYICRGDFKNPVVTICHHYFCEQCALDRLSKDSTCAICRKQLSGTLNVATKLVAKLKTK 250          
BLAST of Ggra8949.t1 vs. uniprot
Match: zinc finger CCCH domain-containing protein 1-like n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A5710F (zinc finger CCCH domain-containing protein 1-like n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A5710F)

HSP 1 Score: 192 bits (488), Expect = 2.690e-56
Identity = 87/161 (54.04%), Postives = 113/161 (70.19%), Query Frame = 0
Query:   98 EAVSSKQSKRPFGPMKAPAHLRASVRVDYQPDVCKDYKETGYCGFGDSCKFLHDRSDYKAGWQLERDWAEKEKKKRDALLRGEDPDAEEANRNKEEYDKDGLPFACFLCREEFKSPVMTLCEHYFCEECALSRMEKDHSCPICKKQLRDTLNPAPKLIAKL 258
            + +SS+++    GP++A AH+R S R DYQPD+CKDYKETGYCG+GDSCKF+HDR DYK+GWQLE++W E EK +R  L  GED D E AN + E+ D D LPFACF+CR+ F  PV+T C+HYFCE CAL    K+  C +C K      N A ++  K+
Sbjct:  164 QTISSEKAGGAHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQLEKEWEEAEKARRMRLAAGEDSDEEGANLSDED-DDDSLPFACFICRKPFVDPVVTNCKHYFCEHCALKHHAKNKKCFVCNKPTLGIFNAAHEIRKKM 323          
BLAST of Ggra8949.t1 vs. uniprot
Match: A0A834W4X9 (Zinc finger CCCH domain-containing protein 1 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834W4X9_9FABA)

HSP 1 Score: 191 bits (486), Expect = 5.810e-56
Identity = 85/161 (52.80%), Postives = 111/161 (68.94%), Query Frame = 0
Query:   98 EAVSSKQSKRPFGPMKAPAHLRASVRVDYQPDVCKDYKETGYCGFGDSCKFLHDRSDYKAGWQLERDWAEKEKKKRDALLRGEDPDAEEANRNKEEYDKDGLPFACFLCREEFKSPVMTLCEHYFCEECALSRMEKDHSCPICKKQLRDTLNPAPKLIAKL 258
            + ++S+++    GP++A AH+R S R DYQPD+CKDYKETGYCG+GDSCKF+HDR DYK+GWQLE++W E EK +R  L  GEDP+ E      EE D D LPFACF+CRE F  PV+T C+HYFCE CAL    K+  C +C +      N A ++  K+
Sbjct:  166 QTIASEKAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQLEKEWDEAEKARRMRLAAGEDPNEEGDELTGEEDDDDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHTKNKKCFVCNQPTLGIFNTAHEIRKKM 326          
BLAST of Ggra8949.t1 vs. uniprot
Match: W8C1K0 ((Mediterranean fruit fly) hypothetical protein n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8C1K0_CERCA)

HSP 1 Score: 191 bits (485), Expect = 7.980e-56
Identity = 97/184 (52.72%), Postives = 120/184 (65.22%), Query Frame = 0
Query:   79 NIEQLVSNDATAERTDTGGEAVSSKQSKRPFGPMKAPAHLRASVRVDYQPDVCKDYKETGYCGFGDSCKFLHDRSDYKAGWQLERDWAEKEKKKRDALLRGEDPDAEEANRNKEEYDKDGLPFACFLCREEFKSPVMTLCEHYFCEECALSRMEKDHSCPICKKQLRDTLNPAPKLIAKLELKH 262
            N  Q    + TA+     G A S    K   GPM+APAHLRA+VR DYQPD+CKDYKETGYCGFGDSCKFLHDRSDYKAGWQLE D A        A  RGE    E+  + +   D++ LPF CF+CR  F++PV+T C+HYFCE+CAL   +K   C +C +Q     NPA +LIA+L+ +H
Sbjct:  152 NYAQYYKKEGTAQ-----GNASSGMVRK---GPMRAPAHLRATVRWDYQPDICKDYKETGYCGFGDSCKFLHDRSDYKAGWQLELDHA--------AQQRGEIESDEDDAKYEIHSDEETLPFKCFICRNSFENPVVTKCKHYFCEKCALENYKKSQRCFVCSQQTNGIFNPAKELIARLKNEH 319          
BLAST of Ggra8949.t1 vs. uniprot
Match: A0A7S2ZZL0 (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZZL0_9RHOD)

HSP 1 Score: 189 bits (479), Expect = 8.410e-56
Identity = 91/172 (52.91%), Postives = 116/172 (67.44%), Query Frame = 0
Query:   88 ATAERTDTGGEAVSSKQSKRPFGPMKAPAHLRASVRVDYQPDVCKDYKETGYCGFGDSCKFLHDRSDYKAGWQLERDWAEKEKKKRDALLRG---EDPDAEEANRNKEEYDKDGLPFACFLCREEFKSPVMTLCEHYFCEECALSRMEKDHSCPICKKQLRDTLNPAPKLIA 256
            ATA    T  E  S+   KR +GP KAP++LRASVR DYQPD+CKDYKETG+CGFGD+C FLHDR DYK+GWQLE++W E   KK+  L  G   +D D E+  +   +  K  LPFACF+CR+ F  P++TLC+HYF E+CAL R   D +C +C K  +   N A KL+A
Sbjct:   83 ATAVDLSTLDEKPSTGTVKRSYGPKKAPSNLRASVRFDYQPDICKDYKETGFCGFGDACIFLHDRGDYKSGWQLEKEWDEANAKKKLKLKSGKTDQDDDIEDQQKADVKKGKQELPFACFICRKPFIRPIVTLCQHYFDEKCALDRFSTDPTCAVCGKDTKGAFNVAKKLVA 254          
BLAST of Ggra8949.t1 vs. uniprot
Match: A0A0S3SXT7 (Uncharacterized protein n=3 Tax=Phaseoleae TaxID=163735 RepID=A0A0S3SXT7_PHAAN)

HSP 1 Score: 190 bits (483), Expect = 1.550e-55
Identity = 83/161 (51.55%), Postives = 111/161 (68.94%), Query Frame = 0
Query:   98 EAVSSKQSKRPFGPMKAPAHLRASVRVDYQPDVCKDYKETGYCGFGDSCKFLHDRSDYKAGWQLERDWAEKEKKKRDALLRGEDPDAEEANRNKEEYDKDGLPFACFLCREEFKSPVMTLCEHYFCEECALSRMEKDHSCPICKKQLRDTLNPAPKLIAKL 258
            + ++S+++    GP++A AH+R S R DYQPD+CKDYKETGYCG+GDSCKF+HDR DYK+GWQLE++W E EK ++  L  GED D EE     +E D+D LPFACF+CR  F  PV+T C+HYFCE CAL    K+  C +C +      N A ++  K+
Sbjct:  165 QTIASEKAGGAHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQLEKEWEEAEKARKMRLAAGEDADEEEGANLNDEDDEDSLPFACFICRNPFADPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPTLGIFNVAHEIRRKM 325          
BLAST of Ggra8949.t1 vs. uniprot
Match: A0A1S3VXV0 (zinc finger CCCH domain-containing protein 1 n=9 Tax=Phaseoleae TaxID=163735 RepID=A0A1S3VXV0_VIGRR)

HSP 1 Score: 190 bits (482), Expect = 2.190e-55
Identity = 83/161 (51.55%), Postives = 111/161 (68.94%), Query Frame = 0
Query:   98 EAVSSKQSKRPFGPMKAPAHLRASVRVDYQPDVCKDYKETGYCGFGDSCKFLHDRSDYKAGWQLERDWAEKEKKKRDALLRGEDPDAEEANRNKEEYDKDGLPFACFLCREEFKSPVMTLCEHYFCEECALSRMEKDHSCPICKKQLRDTLNPAPKLIAKL 258
            + ++S+++    GP++A AH+R S R DYQPD+CKDYKETGYCG+GDSCKF+HDR DYK+GWQLE++W E EK ++  L  GED D EE     +E D+D LPFACF+CR  F  PV+T C+HYFCE CAL    K+  C +C +      N A ++  K+
Sbjct:  165 QTIASEKAGGAHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQLEKEWDEAEKARKMRLAAGEDADEEEGANLNDEDDEDSLPFACFICRNPFADPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPTLGIFNVAHEIRRKM 325          
BLAST of Ggra8949.t1 vs. uniprot
Match: A0A8B8L632 (zinc finger CCCH domain-containing protein 1 isoform X1 n=2 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8L632_ABRPR)

HSP 1 Score: 190 bits (482), Expect = 2.710e-55
Identity = 84/161 (52.17%), Postives = 110/161 (68.32%), Query Frame = 0
Query:   98 EAVSSKQSKRPFGPMKAPAHLRASVRVDYQPDVCKDYKETGYCGFGDSCKFLHDRSDYKAGWQLERDWAEKEKKKRDALLRGEDPDAEEANRNKEEYDKDGLPFACFLCREEFKSPVMTLCEHYFCEECALSRMEKDHSCPICKKQLRDTLNPAPKLIAKL 258
            + ++S+++    GP++A AH+R S R DYQPD+CKDYKETGYCG+GD+CKF+HDR DYK+GWQLE++W E EK KR  L  GED D EE     +E D D LPFACF+CR  F  PV+T C+HYFCE CAL    K+  C +C +      N A ++  K+
Sbjct:  173 QTIASEKAGGAHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEAEKAKRMRLAAGEDADEEEGANLTDEDDDDSLPFACFICRNPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPTLGIFNVAHEIRRKM 333          
BLAST of Ggra8949.t1 vs. uniprot
Match: A0A0A1WMR6 (RING finger protein 113A n=3 Tax=Dacini TaxID=43871 RepID=A0A0A1WMR6_ZEUCU)

HSP 1 Score: 189 bits (480), Expect = 4.120e-55
Identity = 95/181 (52.49%), Postives = 118/181 (65.19%), Query Frame = 0
Query:   79 NIEQLVSNDATAERTDTGGEAVSSKQSKRPFGPMKAPAHLRASVRVDYQPDVCKDYKETGYCGFGDSCKFLHDRSDYKAGWQLERDWAEKEKKKRDALLRGEDPDAEEANRNKEEYDKDGLPFACFLCREEFKSPVMTLCEHYFCEECALSRMEKDHSCPICKKQLRDTLNPAPKLIAKLE 259
            N  Q    + TA+     G A S    K   GP++APAHLRA+VR DYQPD+CKDYKETGYCGFGDSCKFLHDRSDYKAGWQLE D A        A  RG+    E+  + +   D++ LPF CF+CR  F++PV+T C+HYFCE+CAL   +K   C IC +Q     NPA +LIA+L+
Sbjct:  149 NYAQYYKKEGTAQ-----GNASSGMVRK---GPIRAPAHLRATVRWDYQPDICKDYKETGYCGFGDSCKFLHDRSDYKAGWQLELDHA--------AQQRGDAESDEDDAKYEIHSDEESLPFKCFICRNSFENPVVTKCKHYFCEKCALENYKKSQRCKICSQQTNGIFNPAKELIARLK 313          
The following BLAST results are available for this feature:
BLAST of Ggra8949.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3INQ64.810e-12272.02Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QEF14.200e-8956.40Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
zinc finger CCCH domain-containing protein 1-like n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A5710F2.690e-5654.04zinc finger CCCH domain-containing protein 1-like ... [more]
A0A834W4X95.810e-5652.80Zinc finger CCCH domain-containing protein 1 n=1 T... [more]
W8C1K07.980e-5652.72(Mediterranean fruit fly) hypothetical protein n=1... [more]
A0A7S2ZZL08.410e-5652.91Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A0S3SXT71.550e-5551.55Uncharacterized protein n=3 Tax=Phaseoleae TaxID=1... [more]
A0A1S3VXV02.190e-5551.55zinc finger CCCH domain-containing protein 1 n=9 T... [more]
A0A8B8L6322.710e-5552.17zinc finger CCCH domain-containing protein 1 isofo... [more]
A0A0A1WMR64.120e-5552.49RING finger protein 113A n=3 Tax=Dacini TaxID=4387... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 203..240
e-value: 1.2E-5
score: 34.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 203..241
score: 11.722122
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 125..152
e-value: 1.6E-7
score: 41.0
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 126..151
e-value: 1.9E-9
score: 37.2
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 125..153
score: 15.23438
NoneNo IPR availablePFAMPF13923zf-C3HC4_2coord: 203..240
e-value: 8.2E-9
score: 35.1
NoneNo IPR availableGENE3D4.10.1000.10coord: 125..157
e-value: 2.1E-5
score: 25.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..107
NoneNo IPR availablePANTHERPTHR12930:SF0RING FINGER PROTEIN 113A1-RELATEDcoord: 99..261
NoneNo IPR availableCDDcd16539RING-HC_RNF113A_Bcoord: 201..240
e-value: 2.22334E-16
score: 69.1815
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 202..247
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 201..260
e-value: 1.5E-15
score: 58.6
IPR039971Pre-mRNA-splicing factor CWC24-likePANTHERPTHR12930ZINC FINGER PROTEIN 183coord: 99..261
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 218..227
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 123..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:954018..954812 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8949.t1Ggra8949.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 954018..954812 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8949.t1 ID=Ggra8949.t1|Name=Ggra8949.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=265bp
MTAGASTEKLEVVEKHENTIFKKRKRPGNMRTRKRQKPPPQEESGEIGEE
ARVKLVQLKTRGPRKKSTTGWHREQFSTNIEQLVSNDATAERTDTGGEAV
SSKQSKRPFGPMKAPAHLRASVRVDYQPDVCKDYKETGYCGFGDSCKFLH
DRSDYKAGWQLERDWAEKEKKKRDALLRGEDPDAEEANRNKEEYDKDGLP
FACFLCREEFKSPVMTLCEHYFCEECALSRMEKDHSCPICKKQLRDTLNP
APKLIAKLELKHKL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR000571Znf_CCCH
IPR013083Znf_RING/FYVE/PHD
IPR039971CWC24-like
IPR017907Znf_RING_CS
IPR036855Znf_CCCH_sf