Ggra8948.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8948.t1
Unique NameGgra8948.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length370
Homology
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BLAST of Ggra8948.t1 vs. uniprot
Match: A0A2V3IF51 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF51_9FLOR)

HSP 1 Score: 76.6 bits (187), Expect = 1.020e-13
Identity = 36/53 (67.92%), Postives = 46/53 (86.79%), Query Frame = 0 
Query:  317 MMTAEYNSNARQLQVYSILNNLRIEKVMTENELISYSEGLSKIITLIEELSPQ 369
            M+  EYNSNARQLQVYSIL  LRIEK M+ENE+ + SEGL+K+++++EELSPQ
Sbjct:    1 MVLTEYNSNARQLQVYSILKTLRIEKSMSENEITTSSEGLTKVLSIVEELSPQ 53
The following BLAST results are available for this feature:
BLAST of Ggra8948.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IF511.020e-1367.92Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 172..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:945824..946933 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8948.t1Ggra8948.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 945824..946933 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8948.t1 ID=Ggra8948.t1|Name=Ggra8948.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=370bp
MSSSSRSYTVAKYDHLKRSVTVVEPTTEIGRQLRDVASFTISMYPVIDDS
GTAIAFSATRKDEIETTLKGFLPSPKIILTPELFNSRLFPVQLVRDVAAL
YGLDEVPAGIISSLGLESRETSNPSFLTHIWFMNFIDASFETMKIGVDMY
RRSRSASRLDVTAVIAHNNPAPGGNLTDLLPPSGSLGENQAPSSTVELPH
DQTSQPPVANPNTPNTEDPAEPGQNPHLSETARTGYNIIATRKANYVSQH
FKDNRFTGDLSQSIELTLRDYNVCARQHRLTAGQKADYFVNVLDGPARTF
FFHNARDDMPFEQMAMMMTAEYNSNARQLQVYSILNNLRIEKVMTENELI
SYSEGLSKIITLIEELSPQ*
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