Ggra8945.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8945.t1
Unique NameGgra8945.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length219
Homology
BLAST of Ggra8945.t1 vs. uniprot
Match: A0A2V3IWC8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWC8_9FLOR)

HSP 1 Score: 122 bits (305), Expect = 3.860e-31
Identity = 55/95 (57.89%), Postives = 70/95 (73.68%), Query Frame = 0
Query:  116 NTGGRGSGFTEKEIDSLLDILEKHLPVGRDEWEAVQRVHHSGFPDLSRNIDSLKRKFSALHRKKVPTGDPHIAKDIKSAKHIRVEMSEWVDLNNG 210
            +T GRG+GF++ E+DSLLD+LE+HLP+G  EW  V R+H S FP   RN DSLK KFS+LHR+ VPTGDP I +++K AK IR  M E  DL +G
Sbjct:    8 STAGRGNGFSKTEVDSLLDVLEEHLPIGAMEWYTVARIHSSRFPSTQRNADSLKSKFSSLHRQMVPTGDPTIPREVKKAKAIREAMKERADLGDG 102          
BLAST of Ggra8945.t1 vs. uniprot
Match: A0A2V3IWI9 (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWI9_9FLOR)

HSP 1 Score: 121 bits (303), Expect = 4.980e-29
Identity = 54/95 (56.84%), Postives = 71/95 (74.74%), Query Frame = 0
Query:  116 NTGGRGSGFTEKEIDSLLDILEKHLPVGRDEWEAVQRVHHSGFPDLSRNIDSLKRKFSALHRKKVPTGDPHIAKDIKSAKHIRVEMSEWVDLNNG 210
            +T GRG+GF++ E+DSLLD+LE+HLP+G  EW+ V R+H S FP   RN D LKRKFS+LHR+ VPTGDP I +++K AK IR  + E  DL +G
Sbjct:  114 STAGRGNGFSKTEVDSLLDVLEEHLPIGAMEWDTVARIHSSRFPSTQRNADWLKRKFSSLHRQTVPTGDPTILQEVKKAKAIREAVKERADLGDG 208          
BLAST of Ggra8945.t1 vs. uniprot
Match: A0A2V3IP31 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP31_9FLOR)

HSP 1 Score: 119 bits (297), Expect = 1.210e-28
Identity = 48/101 (47.52%), Postives = 76/101 (75.25%), Query Frame = 0
Query:  117 TGGRGSGFTEKEIDSLLDILEKHLPVGRDEWEAVQRVHHSGFPDLSRNIDSLKRKFSALHRKKVPTGDPHIAKDIKSAKHIRVEMSEWVDLNNGEDVKEVV 217
            +GGRGSGF+ + +DSLL++LE+HLP+ ++EW+ +  +H   +P+  R +DSLKRKF++LHR+++PTGDP I  D++ AK IR  M+E  D+  GED  +++
Sbjct:   74 SGGRGSGFSRQGVDSLLELLEEHLPLAKEEWDHIVWLHSERYPEYKRTVDSLKRKFASLHRRRIPTGDPTITPDVEKAKPIRYSMTERADIGEGEDSDDIL 174          
BLAST of Ggra8945.t1 vs. uniprot
Match: A0A2V3ISJ8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISJ8_9FLOR)

HSP 1 Score: 114 bits (284), Expect = 5.390e-28
Identity = 50/97 (51.55%), Postives = 69/97 (71.13%), Query Frame = 0
Query:  115 GNTGGRGSGFTEKEIDSLLDILEKHLPVGRDEWEAVQRVHHSGFPDLSRNIDSLKRKFSALHRKKVPTGDPHIAKDIKSAKHIRVEMSEWVDLNNGE 211
            G  GG G  FT+ E+++ LD+L +HLP G DEWEAV R+H S +P+ +R+ DSL+RKF+ALHRK+VP GDP I   +  A+ +R EM+  VD+  GE
Sbjct:    6 GAGGGHGLSFTKLELENFLDVLSEHLPSGNDEWEAVTRIHQSRWPNANRSTDSLRRKFAALHRKRVPIGDPRIPSSVLKAEDLREEMTTRVDMGEGE 102          
BLAST of Ggra8945.t1 vs. uniprot
Match: A0A2V3IQD7 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQD7_9FLOR)

HSP 1 Score: 116 bits (290), Expect = 5.250e-27
Identity = 47/99 (47.47%), Postives = 74/99 (74.75%), Query Frame = 0
Query:  119 GRGSGFTEKEIDSLLDILEKHLPVGRDEWEAVQRVHHSGFPDLSRNIDSLKRKFSALHRKKVPTGDPHIAKDIKSAKHIRVEMSEWVDLNNGEDVKEVV 217
            GRGSGF+ +E+D+LL++LE+HLP+ ++EW+ + R+    +P+  R +DSLKRKF++LHR+++PTGDP I  D+  AK IR  M+E  D+  GED  +++
Sbjct:  169 GRGSGFSRQEVDNLLELLEEHLPLSKEEWDHIVRLPSERYPEYKRTVDSLKRKFASLHRRRIPTGDPTIPLDVDKAKRIRYSMTERADIGEGEDSDDIL 267          
BLAST of Ggra8945.t1 vs. uniprot
Match: A0A6A3QEF9 (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3QEF9_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.120e-26
Identity = 52/118 (44.07%), Postives = 76/118 (64.41%), Query Frame = 0
Query:   96 PPITKKRTPVKCKNIRSNAGNTGGRGSGFTEKEIDSLLDILEKHLPVGRDEWEAVQRVHHSGFPDLSRNIDSLKRKFSALHRKKVPTGDPHIAKDIKSAKHIRVEMSEWVDLNNGEDV 213
            P  T  RTP      R      GGRG+GF+ +E+ S L+ LE+HLP+GRDEWE V  +HH  F   +R +DSL+RKF+AL R ++PTG+P   ++++ AK +R  M++  D+  G+DV
Sbjct:    5 PTSTDARTP------RRERPAAGGRGAGFSTEEVQSFLETLEQHLPLGRDEWELVLSIHHQHFRAYNRTVDSLRRKFAALCRSRIPTGNPTCPEEVRLAKRVRYLMTQRADIGEGDDV 116          
BLAST of Ggra8945.t1 vs. uniprot
Match: A0A6A3NC13 (Uncharacterized protein (Fragment) n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3NC13_9STRA)

HSP 1 Score: 108 bits (270), Expect = 5.590e-26
Identity = 48/93 (51.61%), Postives = 66/93 (70.97%), Query Frame = 0
Query:  120 RGSGFTEKEIDSLLDILEKHLPVGRDEWEAVQRVHHSGFPDLSRNIDSLKRKFSALHRKKVPTGDPHIAKDIKSAKHIRVEMSEWVDLNNGED 212
            RGSGF++ E   LLD+LE HLP+ RDEW+ V  +H++ +    R  DSLKRKF+ LHRK++PTGDP+I  ++  AK +R EM+   DL +GED
Sbjct:   68 RGSGFSDAETAGLLDLLEAHLPLSRDEWDYVASLHNAAYVGEDRTTDSLKRKFAKLHRKRIPTGDPNIPTNVLKAKRVRGEMTRRADLGDGED 160          
BLAST of Ggra8945.t1 vs. uniprot
Match: V9FK10 (Uncharacterized protein (Fragment) n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=V9FK10_PHYPR)

HSP 1 Score: 104 bits (259), Expect = 6.170e-25
Identity = 47/109 (43.12%), Postives = 71/109 (65.14%), Query Frame = 0
Query:  107 CKNIRSNAGNTGGRGSGFTEKEIDSLLDILEKHLPVGRDEWEAVQRVHHSGFPDLSRNIDSLKRKFSALHRKKVPTGDPHIAKDIKSAKHIRVEMSEWVDLNNGEDVKE 215
            C   R+     GGRG+GF   E+ S L+ LE+HLP+GRDEWE V  +H+  F   +R +DSL+RKF+AL + + PTG+P    ++++AK +R  M++  D+  G+DV E
Sbjct:   14 CAPRRNRVAAPGGRGTGFGADELQSFLETLEEHLPLGRDEWELVLSIHNWSFSANNRTVDSLRRKFAALCQSRKPTGNPTCPAEVRTAKLVRFLMTQRADIGEGDDVSE 122          
BLAST of Ggra8945.t1 vs. uniprot
Match: A0A2V3J563 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J563_9FLOR)

HSP 1 Score: 107 bits (268), Expect = 7.650e-25
Identity = 57/184 (30.98%), Postives = 95/184 (51.63%), Query Frame = 0
Query:   34 SPTPVAGGQKQGPSPETIVLSMRNEEERSANQASERALEVRSRSAEAQLRTPSASLTRHIHRPPITKKRTPVKCKNIRSNAGNTGGRGSGFTEKEIDSLLDILEKHLPVGRDEWEAVQRVHHSGFPDLSRNIDSLKRKFSALHRKKVPTGDPHIAKDIKSAKHIRVEMSEWVDLNNGEDVKEVV 217
            +P P+ G  +  PS    VLS      R  +            +  +Q R+ +  L   +H P I    +P      R    +   +G+GFT+KE++S+L+++EK+LP+ ++EW+ V   H       +  +DS+KRKF+ LHR+K+PTGDP +  D++ AK +R  M E  D+  G   +E +
Sbjct:   38 TPAPLLGASQPAPSTAGAVLSQNAPSARKTS------------TVASQFRSQAYELGNGVHTPTIAH--SPRLRPRQRGGRRSGSSQGTGFTQKEVESVLNVIEKYLPLCKEEWDMVAEEHGETLFVENSTVDSIKRKFATLHRRKIPTGDPRMPDDVRRAKRLRFRMGERADIGEGAGAEETI 207          
BLAST of Ggra8945.t1 vs. uniprot
Match: A0A6A3YCM1 (Uncharacterized protein n=9 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3YCM1_9STRA)

HSP 1 Score: 106 bits (265), Expect = 2.060e-24
Identity = 47/92 (51.09%), Postives = 65/92 (70.65%), Query Frame = 0
Query:  121 GSGFTEKEIDSLLDILEKHLPVGRDEWEAVQRVHHSGFPDLSRNIDSLKRKFSALHRKKVPTGDPHIAKDIKSAKHIRVEMSEWVDLNNGED 212
            GSGF++ E   LLD+LE HLP+ RDEW+ V  +H++ +    R  DSLKRKF+ LHRK++PTGDP+I  ++  AK +R EM+   DL +GED
Sbjct:   69 GSGFSDAETAGLLDLLEAHLPLSRDEWDYVASLHNAAYVGEDRTTDSLKRKFAKLHRKRIPTGDPNIPTNVLKAKRVRGEMTRRADLGDGED 160          
The following BLAST results are available for this feature:
BLAST of Ggra8945.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IWC83.860e-3157.89Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IWI94.980e-2956.84Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
A0A2V3IP311.210e-2847.52Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ISJ85.390e-2851.55Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IQD75.250e-2747.47Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A6A3QEF91.120e-2644.07Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]
A0A6A3NC135.590e-2651.61Uncharacterized protein (Fragment) n=2 Tax=Phytoph... [more]
V9FK106.170e-2543.12Uncharacterized protein (Fragment) n=6 Tax=Phytoph... [more]
A0A2V3J5637.650e-2530.98Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A6A3YCM12.060e-2451.09Uncharacterized protein n=9 Tax=Phytophthora fraga... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availablePANTHERPTHR34409FAMILY NOT NAMEDcoord: 83..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:894678..895334 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8945.t1Ggra8945.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 894678..895334 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8945.t1 ID=Ggra8945.t1|Name=Ggra8945.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=219bp
MERGLQDNEKAFLSMQDERHVPVSEVTTLPIRMSPTPVAGGQKQGPSPET
IVLSMRNEEERSANQASERALEVRSRSAEAQLRTPSASLTRHIHRPPITK
KRTPVKCKNIRSNAGNTGGRGSGFTEKEIDSLLDILEKHLPVGRDEWEAV
QRVHHSGFPDLSRNIDSLKRKFSALHRKKVPTGDPHIAKDIKSAKHIRVE
MSEWVDLNNGEDVKEVVE*
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