Ggra8944.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8944.t1
Unique NameGgra8944.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length422
Homology
BLAST of Ggra8944.t1 vs. uniprot
Match: A0A0W8CSX0 (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CSX0_PHYNI)

HSP 1 Score: 63.5 bits (153), Expect = 4.320e-7
Identity = 50/188 (26.60%), Postives = 94/188 (50.00%), Query Frame = 0
Query:  219 MLNLLEIQRASKYLKEGRLSLYECQNALEMLVEDVEAGFNDTKSLFYRCSLMKKYIATDAEILKYRDFESGVCKIQSDQSLLITPEERKACKCLRCTNAEPTVGVTEEGSHPDTYEQRLERRKRRKFPRSGFVYRNCDFIFGSAPEVDQFLSIAWNMLRGDIVEVHHSVLESILFLRMNKRFWSMQMV 406
            ++ L +++  S  L+   L+L + ++ L+ L+E V+  F             + Y+A DA+I+   +FES V K+  D++ L++  E+ A K      AE    VTE+ +     ++ L   KRRK      VY   + I  ++   ++  S+A  +LR +   +   +LE +LFL++N ++W +  V
Sbjct:  690 LVELADVESVSMKLQSEDLNLLDARDLLDGLLE-VKPSF-------------RHYLAPDADIVAAPEFESAVIKVLGDRAKLLSRAEKAALKPFERKTAE-AADVTEKTAKVGFADRIL---KRRKVQEDKIVYSQQNAIPPTSNAAERLFSMARMVLRYERNRLSPLMLEMLLFLKLNSKYWDVTTV 859          
BLAST of Ggra8944.t1 vs. uniprot
Match: A0A0W8CHW1 (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CHW1_PHYNI)

HSP 1 Score: 62.0 bits (149), Expect = 5.460e-7
Identity = 50/195 (25.64%), Postives = 95/195 (48.72%), Query Frame = 0
Query:  219 MLNLLEIQRASKYLKEGRLSLYECQNALEMLVEDVEAGFNDTKSLFYRCSLMKKYIATDAEILKYRDFESGVCKIQSDQSLLITPEERKACKCLRCTNAEPTVGVTEEGSHPDTYEQRLERRKRRKFPRSGFVYRNCDFIFGSAPEVDQFLSIAWNMLRGDIVEVHHSVLESILFLRMNKRFWSMQMVQKAYHST 413
            +L L +++  S  L+   L+L + ++ L+ L+E V+  F             + Y+A DA+I+   +FES V K+   ++ L++  E+ A K      AE    VTE+ +     ++ L   KRRK       Y   + I  ++   ++  S+A  +LR +   +   +LE +LFL++N ++W+ Q + +    T
Sbjct:   70 LLELADVESVSMKLQSEDLNLLDARDLLDGLLE-VKPSF-------------RHYLAPDADIVAAPEFESAVIKVLGGRAKLLSRAEKAALKPFERKTAE-AADVTEKTAKVGFADRIL---KRRKVQEDKSAYSQLNAIPPTSNAAERLFSMARMVLRYERNRLSPLMLEMLLFLKLNSKYWTSQRLTQLSRKT 246          
BLAST of Ggra8944.t1 vs. uniprot
Match: W2RDL8 (Dimer_Tnp_hAT domain-containing protein n=9 Tax=Phytophthora parasitica TaxID=4792 RepID=W2RDL8_PHYPN)

HSP 1 Score: 60.8 bits (146), Expect = 9.740e-7
Identity = 51/187 (27.27%), Postives = 88/187 (47.06%), Query Frame = 0
Query:  219 MLNLLEIQRASKYLKEGRLSLYECQNALEMLVEDVEAGFNDTKSLFYRCSLMKKYIATDAEILKYRDFESGVCKIQSDQSLLITPEERKACKCLRCTNAEPTVGVTEEGSHPDTYEQRLERR--KRRKFPRSGFVYRNCDFIFGSAPEVDQFLSIAWNMLRGDIVEVHHSVLESILFLRMNKRFWSM 403
            +  L +++  S  L+   L+L + ++ L+ L+E         K  FYR      Y A +A+I+   +FES V K+   Q+  ++  E+ A   LR    + T+  T E     T + R   R  KRRK       Y   D I  ++   ++  S+A  +LR +   +   +LE +LFL+MN ++W +
Sbjct:  112 LFELADVESVSMKLQSVELNLLDARDLLDGLLE--------VKPSFYR------YFAPNADIVAAPEFESAVIKVLEGQAKQLSLGEKAA---LRSFERQTTIAATAE-----TTKMRFADRILKRRKVQDDTSAYGQLDAIPSTSNAAERLFSMARMVLRYERNRLSPLMLEMLLFLKMNSKYWDV 276          
BLAST of Ggra8944.t1 vs. uniprot
Match: A0A0W8C404 (Pre-mRNA-splicing factor 38A n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8C404_PHYNI)

HSP 1 Score: 60.5 bits (145), Expect = 2.420e-6
Identity = 49/188 (26.06%), Postives = 92/188 (48.94%), Query Frame = 0
Query:  219 MLNLLEIQRASKYLKEGRLSLYECQNALEMLVEDVEAGFNDTKSLFYRCSLMKKYIATDAEILKYRDFESGVCKIQSDQSLLITPEERKACKCLRCTNAEPTVGVTEEGSHPDTYEQRLERRKRRKFPRSGFVYRNCDFIFGSAPEVDQFLSIAWNMLRGDIVEVHHSVLESILFLRMNKRFWSMQMV 406
            +L L +++  S  L+   L+L + ++ L+ L+E V+  F             + Y+A DA+I+   +FES V K+   ++ L++  E+ A K      AE    VTE+ +     ++ L   KRRK       Y   + I  ++   ++  S+A  +LR +   +   +LE +LFL++N ++W +  V
Sbjct:  219 LLELADVESVSMKLQSEDLNLLDARDLLDGLLE-VKPSF-------------RHYLAPDADIVAAPEFESAVIKVLGGRAKLLSRAEKAALKPFERKTAE-AADVTEKTAKVGFADRIL---KRRKVQEDKSAYSQLNAIPPTSNAAERLFSMARMVLRYERNRLSPLMLEMLLFLKLNSKYWDVTTV 388          
BLAST of Ggra8944.t1 vs. uniprot
Match: W2QUW3 (Uncharacterized protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QUW3_PHYPN)

HSP 1 Score: 60.1 bits (144), Expect = 2.670e-6
Identity = 52/205 (25.37%), Postives = 95/205 (46.34%), Query Frame = 0
Query:  208 SQSYRANMLETMLNLLEIQRASKYLKEGRLSLYECQNALEMLVEDVEAGFNDTKSLFYRCSLMKKYIATDAEILKYRDFESGVCKIQSDQSLLITPEERKACKCLR----CTNAEPTVGVTEEGSHPDTYEQRLERRKRRKFPRSGFVYRNCDFIFGSAPEVDQFLSIAWNMLRGDIVEVHHSVLESILFLRMNKRFWSMQMVQK 408
            S++    +   + +L +++  SK L+  RL+  + ++  + L+E ++  F              KYIA DA I+ + DFE  V K+ +  + L+T  E    K  +      +      VT+EG     + +R+   KRRK P +   Y     I  ++  V+Q  S+A  +LR +   +   +LE  LFL++N   W +  V++
Sbjct:  159 SRTAHRKLAALLASLEDVESVSKRLQANRLTSLDARDLFDGLLE-IQPSF-------------AKYIAPDANIVHWPDFEKAVVKVLTGHAALLTDAETATLKSFKRRASMASVSERAAVTKEG-----FAERI--LKRRKVPAAPATYVLLGAIPPTSNIVEQLFSMARAVLRHERHRLSPIMLEVNLFLKVNSSRWDVTTVKQ 342          
BLAST of Ggra8944.t1 vs. uniprot
Match: A0A0W8CIG6 (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CIG6_PHYNI)

HSP 1 Score: 59.3 bits (142), Expect = 3.470e-6
Identity = 51/194 (26.29%), Postives = 91/194 (46.91%), Query Frame = 0
Query:  219 MLNLLEIQRASKYLKEGRLSLYECQNALEMLVEDVEAGFNDTKSLFYRCSLMKKYIATDAEILKYRDFESGVCKIQSDQSLLITPEERKACKCLR----CTNAEPTVGVTEEGSHPDTYEQRLERRKRRKFPRSGFVYRNCDFIFGSAPEVDQFLSIAWNMLRGDIVEVHHSVLESILFLRMNKRFWSMQMVQK 408
            + +L +++  SK L+  RL+  + ++  + L+E ++  F              KYIA DA I+ + DFE  V K+ +  + L+T  E    K  +      +      VT+EG     + +R+   KRRK P +   Y     I  ++  V+Q  S+A  +LR +   +   +LE  LFL++N   W +  V++
Sbjct:  117 LASLEDVESVSKRLQANRLTSLDARDLFDGLLE-IQPSF-------------AKYIAPDANIVHWPDFEKAVVKVLTGHAALLTDAETAXLKSFKRRASMASVSERAAVTKEG-----FAERI--LKRRKVPAAPATYVLLGAIPPTSNIVEQLFSMARAVLRHERHRLSPIMLEVNLFLKVNSSRWDVTTVKQ 289          
BLAST of Ggra8944.t1 vs. uniprot
Match: W2FJQ4 (Uncharacterized protein n=1 Tax=Phytophthora parasitica TaxID=4792 RepID=W2FJQ4_PHYPR)

HSP 1 Score: 58.2 bits (139), Expect = 5.490e-6
Identity = 52/205 (25.37%), Postives = 95/205 (46.34%), Query Frame = 0
Query:  208 SQSYRANMLETMLNLLEIQRASKYLKEGRLSLYECQNALEMLVEDVEAGFNDTKSLFYRCSLMKKYIATDAEILKYRDFESGVCKIQSDQSLLITPEERKACKCLR----CTNAEPTVGVTEEGSHPDTYEQRLERRKRRKFPRSGFVYRNCDFIFGSAPEVDQFLSIAWNMLRGDIVEVHHSVLESILFLRMNKRFWSMQMVQK 408
            S++    +   + +L +++  SK L+  RL+  + ++  + L+E        T+  F       KYIA DA I+ + DFE  V K+ +  + L+T  E    K  +      +      VT+EG     + +R+   KRRK P +   Y     I  ++  V++  S+A  +LR +   +   +LE  LFL++N   W +  V++
Sbjct:   59 SRTAHRKLAALLASLEDVESVSKRLQANRLTALDARDLFDGLME--------TQPSF------AKYIAPDANIVHWPDFEKAVVKVLTGHAALLTDAETATLKSFKRRASMASVSERAAVTKEG-----FAERI--LKRRKVPAAPATYVLLGAIPPTSNIVERLFSMARAVLRHERHRLSPIMLEVNLFLKVNSSRWDVTTVKQ 242          
The following BLAST results are available for this feature:
BLAST of Ggra8944.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A0W8CSX04.320e-726.60Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A0W8CHW15.460e-725.64Uncharacterized protein n=1 Tax=Phytophthora nicot... [more]
W2RDL89.740e-727.27Dimer_Tnp_hAT domain-containing protein n=9 Tax=Ph... [more]
A0A0W8C4042.420e-626.06Pre-mRNA-splicing factor 38A n=1 Tax=Phytophthora ... [more]
W2QUW32.670e-625.37Uncharacterized protein n=4 Tax=Phytophthora paras... [more]
A0A0W8CIG63.470e-626.29Uncharacterized protein n=1 Tax=Phytophthora nicot... [more]
W2FJQ45.490e-625.37Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR40866FAMILY NOT NAMEDcoord: 163..399

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:883921..885654 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8944.t1Ggra8944.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 883921..885654 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8944.t1 ID=Ggra8944.t1|Name=Ggra8944.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=422bp
MTLKRKHTEAKSRNPDVAEMSPEENALYDYLRHHEKFTEKTIVEVLLKLE
KLVENEIREELKGSQCGAISHGGWSWSGVHYIGLFASYMSSPTSHWAEDI
PNDGGARLAFLSCSPILNVDPKFPYEYPEAKEADGFDISLSAEVRAEQIE
KVLSFYGVMTSTFVLDVEMVIVLCHKIMRGREEQPRDMKSISDAINLRPH
RHHATRWSQSYRANMLETMLNLLEIQRASKYLKEGRLSLYECQNALEMLV
EDVEAGFNDTKSLFYRCSLMKKYIATDAEILKYRDFESGVCKIQSDQSLL
ITPEERKACKCLRCTNAEPTVGVTEEGSHPDTYEQRLERRKRRKFPRSGF
VYRNCDFIFGSAPEVDQFLSIAWNMLRGDIVEVHHSVLESILFLRMNKRF
WSMQMVQKAYHSTKKDTTGQA*
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