Ggra8937.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8937.t1
Unique NameGgra8937.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length458
Homology
BLAST of Ggra8937.t1 vs. uniprot
Match: A0A2V3J4F4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4F4_9FLOR)

HSP 1 Score: 147 bits (372), Expect = 7.850e-36
Identity = 131/404 (32.43%), Postives = 203/404 (50.25%), Query Frame = 0
Query:   72 DRKRVKSLRTSRSR-SAMTSAPRSGKFFSFNTRTYRRKFLKKASTADRESKGVDVENEDATCSESFPSPISIVLTEEETENIAR----IQRKRLSLSAIRHTRANSTMMFARENLQSSPQSLQSAGGTRSETRDDLWLNSSTSEEKDAFNGLRARSLLDISDWPSFKQ----NRHSSIGPSVPCDTSLKTKIDDNEEDDEDVEVVSVQSDSISDDSQHVTTSGGSRIFSFRCFFRELGSEGERARTSHVSLGSTSQNP--------PKDEPNRLLLRRSSSLPQNIRINAGATKAASNPQSKRVASSDDGLQCPWGVKATKKEPESLAVRNNVPLTFRIADISSAL-NFTGKRGNSSSSESINLSDDDYEGGESNITAKQDGNIEMQHDDFIEYTVKMAKKQRK 457
            +R+R +SLR S    S  TSAPRS KF    + T R+ F K++   DR++     E E    S+ F   +S++ + +  +N++     + ++R+SL A+R T+ N TM+F ++    SP S  ++   + ++  +  L   +  E  +  G R +SLLD+      K+    N   +  PS  C    K ++ D    D+D+E  S  S+  S  SQ    SG   + + R  F++   +    +T H S GS              +   N  L+RRSSSLP ++  +     A S   +  V +S+D LQ PWGVKA + E  S   ++++    R+ADISSA+   TG+RG  S S SI+LSD+D    E        G +EM  DDF+EYTVK A+K+RK
Sbjct:   73 NRRRAQSLRISHQHHSVKTSAPRSVKFLGLASITPRKGFFKRSPLGDRKAH----EPEGDEMSDPFKMELSLLTSGDTNQNVSADLSAMGKRRVSLRAMRLTKGNETMLFGKDISVCSPLSNPTSNSGKPDSYGNEALQVPSMPENASTLGSRTKSLLDLRSAKKRKEWGLSNTLCTFLPSSECGEEFKEELKDR---DDDLETGSFHSEKSSKRSQSEPNSGFGTLPNLRLLFKDGIYQDRSTKTGHYSPGSAGVRSFHRYILGRGQASNNNNLIRRSSSLPDSLNKDFPQGNAYSPNPTVVVLTSEDALQSPWGVKADQFEVSS--GKSSITRVSRMADISSAVYGLTGRRGKDSGSGSIHLSDEDDVRCEDVAEGSASGPVEMFQDDFVEYTVKKARKRRK 467          
The following BLAST results are available for this feature:
BLAST of Ggra8937.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J4F47.850e-3632.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 306..363
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 411..435
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 411..436
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 331..361
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..95
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 308..323
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 236..280

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:866625..867998 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8937.t1Ggra8937.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 866625..867998 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8937.t1 ID=Ggra8937.t1|Name=Ggra8937.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=458bp
MAKSSSSSPRHSSHNPNRETRSERNHGHWRKIFKFTRKKDVCNGSETIAG
DPETKPQLLNGPGASQQDHLEDRKRVKSLRTSRSRSAMTSAPRSGKFFSF
NTRTYRRKFLKKASTADRESKGVDVENEDATCSESFPSPISIVLTEEETE
NIARIQRKRLSLSAIRHTRANSTMMFARENLQSSPQSLQSAGGTRSETRD
DLWLNSSTSEEKDAFNGLRARSLLDISDWPSFKQNRHSSIGPSVPCDTSL
KTKIDDNEEDDEDVEVVSVQSDSISDDSQHVTTSGGSRIFSFRCFFRELG
SEGERARTSHVSLGSTSQNPPKDEPNRLLLRRSSSLPQNIRINAGATKAA
SNPQSKRVASSDDGLQCPWGVKATKKEPESLAVRNNVPLTFRIADISSAL
NFTGKRGNSSSSESINLSDDDYEGGESNITAKQDGNIEMQHDDFIEYTVK
MAKKQRK*
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