Ggra8937.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra8937.t1
Unique NameGgra8937.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length458
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:866625..867998 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8937Ggra8937Gracilaria gracilis GNS1m malegenetig00000860_pilon 866625..867998 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8937.t1.stop1Ggra8937.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000860_pilon 866625..866627 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8937.t1.CDS1Ggra8937.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000860_pilon 866625..867998 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8937.t1.exon1Ggra8937.t1.exon1Gracilaria gracilis GNS1m maleexontig00000860_pilon 866625..867998 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8937.t1.start1Ggra8937.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000860_pilon 867996..867998 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8937.t1Ggra8937.t1Gracilaria gracilis GNS1m malepolypeptidetig00000860_pilon 866625..867998 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra8937.t1 ID=Ggra8937.t1|Name=Ggra8937.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=458bp
MAKSSSSSPRHSSHNPNRETRSERNHGHWRKIFKFTRKKDVCNGSETIAG
DPETKPQLLNGPGASQQDHLEDRKRVKSLRTSRSRSAMTSAPRSGKFFSF
NTRTYRRKFLKKASTADRESKGVDVENEDATCSESFPSPISIVLTEEETE
NIARIQRKRLSLSAIRHTRANSTMMFARENLQSSPQSLQSAGGTRSETRD
DLWLNSSTSEEKDAFNGLRARSLLDISDWPSFKQNRHSSIGPSVPCDTSL
KTKIDDNEEDDEDVEVVSVQSDSISDDSQHVTTSGGSRIFSFRCFFRELG
SEGERARTSHVSLGSTSQNPPKDEPNRLLLRRSSSLPQNIRINAGATKAA
SNPQSKRVASSDDGLQCPWGVKATKKEPESLAVRNNVPLTFRIADISSAL
NFTGKRGNSSSSESINLSDDDYEGGESNITAKQDGNIEMQHDDFIEYTVK
MAKKQRK*
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spliced messenger RNA

>Ggra8937.t1 ID=Ggra8937.t1|Name=Ggra8937.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1374bp|location=Sequence derived from alignment at tig00000860_pilon:866625..867998- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGAAATCAAGTTCTTCTAGTCCCCGACATTCAAGCCATAACCCGAA
TCGAGAAACTCGTTCGGAAAGAAACCATGGACACTGGCGCAAGATTTTCA
AGTTTACAAGGAAGAAGGACGTATGTAACGGCAGTGAAACAATAGCAGGC
GATCCTGAAACGAAACCACAACTGCTCAATGGGCCTGGTGCTTCTCAGCA
AGATCACTTGGAGGATAGGAAGCGCGTGAAGTCTTTGCGCACGTCTCGGT
CCCGATCGGCAATGACCTCTGCACCGAGAAGCGGGAAGTTTTTTTCATTT
AATACTCGAACATATAGGAGGAAATTCTTAAAGAAGGCCAGCACCGCTGA
CAGAGAGTCGAAAGGGGTGGATGTTGAAAACGAAGACGCAACATGCTCAG
AATCCTTTCCATCTCCAATAAGTATCGTATTAACCGAGGAAGAGACAGAA
AACATTGCCAGAATCCAGAGAAAGCGATTGTCGTTATCAGCAATTCGGCA
TACCAGGGCGAATTCAACAATGATGTTCGCAAGAGAAAATCTACAGTCAT
CACCTCAATCACTTCAGTCCGCAGGAGGAACGAGGTCCGAAACGCGAGAC
GACTTGTGGCTGAACTCTTCAACAAGTGAAGAAAAGGATGCATTCAACGG
ACTAAGGGCTAGGAGCTTGTTAGACATTAGTGATTGGCCTTCATTCAAGC
AAAACCGCCATTCTAGTATCGGTCCTTCTGTTCCATGTGATACATCCCTG
AAGACGAAAATAGATGACAATGAGGAGGACGATGAGGACGTCGAGGTTGT
TTCGGTCCAGAGTGATAGCATTAGCGATGATTCGCAGCATGTCACTACCT
CAGGCGGAAGCAGAATCTTCAGCTTCCGATGTTTCTTTCGGGAGTTAGGC
TCAGAGGGCGAAAGAGCTAGGACCAGTCACGTCTCTTTAGGTTCAACGAG
TCAGAATCCACCCAAAGATGAACCTAATCGGCTGCTTTTGAGACGTTCGT
CAAGCCTTCCTCAAAACATTCGTATCAATGCAGGAGCTACGAAAGCCGCT
TCCAATCCCCAAAGCAAGAGGGTGGCATCTTCTGATGATGGATTGCAATG
TCCATGGGGGGTTAAAGCGACAAAAAAGGAGCCCGAGTCTTTGGCTGTGA
GGAATAACGTCCCCTTGACTTTTCGTATCGCAGACATATCTTCTGCTCTA
AATTTTACTGGGAAAAGGGGCAACTCATCAAGTTCGGAATCGATCAACCT
GAGCGATGACGATTACGAAGGCGGCGAGTCTAACATCACTGCGAAACAAG
ACGGAAACATAGAGATGCAACATGACGATTTCATTGAATACACAGTTAAA
ATGGCAAAGAAGCAGAGAAAATAA
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protein sequence of Ggra8937.t1

>Ggra8937.t1 ID=Ggra8937.t1|Name=Ggra8937.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=458bp
MAKSSSSSPRHSSHNPNRETRSERNHGHWRKIFKFTRKKDVCNGSETIAG
DPETKPQLLNGPGASQQDHLEDRKRVKSLRTSRSRSAMTSAPRSGKFFSF
NTRTYRRKFLKKASTADRESKGVDVENEDATCSESFPSPISIVLTEEETE
NIARIQRKRLSLSAIRHTRANSTMMFARENLQSSPQSLQSAGGTRSETRD
DLWLNSSTSEEKDAFNGLRARSLLDISDWPSFKQNRHSSIGPSVPCDTSL
KTKIDDNEEDDEDVEVVSVQSDSISDDSQHVTTSGGSRIFSFRCFFRELG
SEGERARTSHVSLGSTSQNPPKDEPNRLLLRRSSSLPQNIRINAGATKAA
SNPQSKRVASSDDGLQCPWGVKATKKEPESLAVRNNVPLTFRIADISSAL
NFTGKRGNSSSSESINLSDDDYEGGESNITAKQDGNIEMQHDDFIEYTVK
MAKKQRK*
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mRNA from alignment at tig00000860_pilon:866625..867998-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra8937.t1 ID=Ggra8937.t1|Name=Ggra8937.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1374bp|location=Sequence derived from alignment at tig00000860_pilon:866625..867998- (Gracilaria gracilis GNS1m male)
ATGGCGAAATCAAGTTCTTCTAGTCCCCGACATTCAAGCCATAACCCGAA
TCGAGAAACTCGTTCGGAAAGAAACCATGGACACTGGCGCAAGATTTTCA
AGTTTACAAGGAAGAAGGACGTATGTAACGGCAGTGAAACAATAGCAGGC
GATCCTGAAACGAAACCACAACTGCTCAATGGGCCTGGTGCTTCTCAGCA
AGATCACTTGGAGGATAGGAAGCGCGTGAAGTCTTTGCGCACGTCTCGGT
CCCGATCGGCAATGACCTCTGCACCGAGAAGCGGGAAGTTTTTTTCATTT
AATACTCGAACATATAGGAGGAAATTCTTAAAGAAGGCCAGCACCGCTGA
CAGAGAGTCGAAAGGGGTGGATGTTGAAAACGAAGACGCAACATGCTCAG
AATCCTTTCCATCTCCAATAAGTATCGTATTAACCGAGGAAGAGACAGAA
AACATTGCCAGAATCCAGAGAAAGCGATTGTCGTTATCAGCAATTCGGCA
TACCAGGGCGAATTCAACAATGATGTTCGCAAGAGAAAATCTACAGTCAT
CACCTCAATCACTTCAGTCCGCAGGAGGAACGAGGTCCGAAACGCGAGAC
GACTTGTGGCTGAACTCTTCAACAAGTGAAGAAAAGGATGCATTCAACGG
ACTAAGGGCTAGGAGCTTGTTAGACATTAGTGATTGGCCTTCATTCAAGC
AAAACCGCCATTCTAGTATCGGTCCTTCTGTTCCATGTGATACATCCCTG
AAGACGAAAATAGATGACAATGAGGAGGACGATGAGGACGTCGAGGTTGT
TTCGGTCCAGAGTGATAGCATTAGCGATGATTCGCAGCATGTCACTACCT
CAGGCGGAAGCAGAATCTTCAGCTTCCGATGTTTCTTTCGGGAGTTAGGC
TCAGAGGGCGAAAGAGCTAGGACCAGTCACGTCTCTTTAGGTTCAACGAG
TCAGAATCCACCCAAAGATGAACCTAATCGGCTGCTTTTGAGACGTTCGT
CAAGCCTTCCTCAAAACATTCGTATCAATGCAGGAGCTACGAAAGCCGCT
TCCAATCCCCAAAGCAAGAGGGTGGCATCTTCTGATGATGGATTGCAATG
TCCATGGGGGGTTAAAGCGACAAAAAAGGAGCCCGAGTCTTTGGCTGTGA
GGAATAACGTCCCCTTGACTTTTCGTATCGCAGACATATCTTCTGCTCTA
AATTTTACTGGGAAAAGGGGCAACTCATCAAGTTCGGAATCGATCAACCT
GAGCGATGACGATTACGAAGGCGGCGAGTCTAACATCACTGCGAAACAAG
ACGGAAACATAGAGATGCAACATGACGATTTCATTGAATACACAGTTAAA
ATGGCAAAGAAGCAGAGAAAATAA
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Coding sequence (CDS) from alignment at tig00000860_pilon:866625..867998-

>Ggra8937.t1 ID=Ggra8937.t1|Name=Ggra8937.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1374bp|location=Sequence derived from alignment at tig00000860_pilon:866625..867998- (Gracilaria gracilis GNS1m male)
ATGGCGAAATCAAGTTCTTCTAGTCCCCGACATTCAAGCCATAACCCGAA
TCGAGAAACTCGTTCGGAAAGAAACCATGGACACTGGCGCAAGATTTTCA
AGTTTACAAGGAAGAAGGACGTATGTAACGGCAGTGAAACAATAGCAGGC
GATCCTGAAACGAAACCACAACTGCTCAATGGGCCTGGTGCTTCTCAGCA
AGATCACTTGGAGGATAGGAAGCGCGTGAAGTCTTTGCGCACGTCTCGGT
CCCGATCGGCAATGACCTCTGCACCGAGAAGCGGGAAGTTTTTTTCATTT
AATACTCGAACATATAGGAGGAAATTCTTAAAGAAGGCCAGCACCGCTGA
CAGAGAGTCGAAAGGGGTGGATGTTGAAAACGAAGACGCAACATGCTCAG
AATCCTTTCCATCTCCAATAAGTATCGTATTAACCGAGGAAGAGACAGAA
AACATTGCCAGAATCCAGAGAAAGCGATTGTCGTTATCAGCAATTCGGCA
TACCAGGGCGAATTCAACAATGATGTTCGCAAGAGAAAATCTACAGTCAT
CACCTCAATCACTTCAGTCCGCAGGAGGAACGAGGTCCGAAACGCGAGAC
GACTTGTGGCTGAACTCTTCAACAAGTGAAGAAAAGGATGCATTCAACGG
ACTAAGGGCTAGGAGCTTGTTAGACATTAGTGATTGGCCTTCATTCAAGC
AAAACCGCCATTCTAGTATCGGTCCTTCTGTTCCATGTGATACATCCCTG
AAGACGAAAATAGATGACAATGAGGAGGACGATGAGGACGTCGAGGTTGT
TTCGGTCCAGAGTGATAGCATTAGCGATGATTCGCAGCATGTCACTACCT
CAGGCGGAAGCAGAATCTTCAGCTTCCGATGTTTCTTTCGGGAGTTAGGC
TCAGAGGGCGAAAGAGCTAGGACCAGTCACGTCTCTTTAGGTTCAACGAG
TCAGAATCCACCCAAAGATGAACCTAATCGGCTGCTTTTGAGACGTTCGT
CAAGCCTTCCTCAAAACATTCGTATCAATGCAGGAGCTACGAAAGCCGCT
TCCAATCCCCAAAGCAAGAGGGTGGCATCTTCTGATGATGGATTGCAATG
TCCATGGGGGGTTAAAGCGACAAAAAAGGAGCCCGAGTCTTTGGCTGTGA
GGAATAACGTCCCCTTGACTTTTCGTATCGCAGACATATCTTCTGCTCTA
AATTTTACTGGGAAAAGGGGCAACTCATCAAGTTCGGAATCGATCAACCT
GAGCGATGACGATTACGAAGGCGGCGAGTCTAACATCACTGCGAAACAAG
ACGGAAACATAGAGATGCAACATGACGATTTCATTGAATACACAGTTAAA
ATGGCAAAGAAGCAGAGAAAATAA
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