Ggra8930.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8930.t1
Unique NameGgra8930.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length251
Homology
BLAST of Ggra8930.t1 vs. uniprot
Match: A0A2V3J484 (25.3 kDa vesicle transport protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J484_9FLOR)

HSP 1 Score: 264 bits (675), Expect = 5.450e-86
Identity = 154/218 (70.64%), Postives = 160/218 (73.39%), Query Frame = 0
Query:    1 MPKVTLIARLTDGLPLAASMADEKDAYAKELET--------TLSLQTI------------------------------------------KKMTFDYLDELRKEFFQVYGNQVQSASRPYEFIRFDTFIQKTKKVYNDSKTQRNLQKLNSELKDVHSIMTKNINEVISRGERLENVAQKSTRLAQESKRYAAQAKHANRMRIVRQYAPIGIVVAVVVL 168
            MPKVTLIARL+DGLPL ASMADEKDAYAKELET          SL T                                           K++ FDYLDELRKEFFQVYGNQVQSA+RPYEFIRFDTFIQKTKKVYNDSKTQRNLQKLNSELKDVHSIMTKNINEVISRGERLENVAQKSTRLAQESKRYAAQAKHANRMR+VRQYAPIGIVV VV +
Sbjct:    1 MPKVTLIARLSDGLPLTASMADEKDAYAKELETYERQAKKLVRSLATSQTGNPPSQQDEYVTVESGPYFCFHYVLASGVCILTLTERAYPKRLAFDYLDELRKEFFQVYGNQVQSATRPYEFIRFDTFIQKTKKVYNDSKTQRNLQKLNSELKDVHSIMTKNINEVISRGERLENVAQKSTRLAQESKRYAAQAKHANRMRVVRQYAPIGIVVIVVAM 218          
BLAST of Ggra8930.t1 vs. uniprot
Match: R7QEE3 (Putative vesicle transport protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEE3_CHOCR)

HSP 1 Score: 226 bits (575), Expect = 5.910e-71
Identity = 117/140 (83.57%), Postives = 128/140 (91.43%), Query Frame = 0
Query:   41 KKMTFDYLDELRKEFFQVYGNQVQSASRPYEFIRFDTFIQKTKKVYNDSKTQRNLQKLNSELKDVHSIMTKNINEVISRGERLENVAQKSTRLAQESKRYAAQAKHANRMRIVRQYAPIGIVVAVVVLPEKKLIWSVKRK 180
            K++ FDYLDELRKEFFQ+YGNQV  ASRPYEFIRFDTFIQKTKKVYNDSKTQRNLQKLNSELKDVHSIMT+NINEVISRGERL+NVAQKSTRLAQESKRYAAQAKHANRMR+VRQYAP+G+VV VV +     +W V +K
Sbjct:   90 KRLAFDYLDELRKEFFQIYGNQVAGASRPYEFIRFDTFIQKTKKVYNDSKTQRNLQKLNSELKDVHSIMTRNINEVISRGERLDNVAQKSTRLAQESKRYAAQAKHANRMRVVRQYAPVGVVVVVVCI-----MWFVMKK 224          
BLAST of Ggra8930.t1 vs. uniprot
Match: A0A5J4YNY6 (25.3 kDa vesicle transport protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YNY6_PORPP)

HSP 1 Score: 192 bits (487), Expect = 2.020e-57
Identity = 113/231 (48.92%), Postives = 137/231 (59.31%), Query Frame = 0
Query:    1 MPKVTLIARLTDGLPLAASMADEKDAYAKELET-----------------------------------------------------------------TLSLQTI-KKMTFDYLDELRKEFFQVYGNQVQSASRPYEFIRFDTFIQKTKKVYNDSKTQRNLQKLNSELKDVHSIMTKNINEVISRGERLENVAQKSTRLAQESKRYAAQAKHANRMRIVRQYAPIGIVVAV 165
            MPK+T+I RL DGLPLAASMADEKDA+A E+ET                                                                 TL+ +   +K+ +DY+DELRKEF  VYG QV  AS+PYEFIRFD FIQKTKK+Y DS+TQRNL KLN+ELKDVH+IMTKNINEV+ RGERL+ V  KS RL  ESK+Y+  AKHANRMR++R Y P G+++ V
Sbjct:    1 MPKITMIGRLADGLPLAASMADEKDAHANEMETYERQAKKLLRSLSRAAPPHESGMNTAYAIDVVVKPGPTASQTFVSVESGTAFCFHYVVDGGVCFLTLTERAYPRKLAYDYIDELRKEFLTVYGAQVAGASKPYEFIRFDGFIQKTKKLYTDSRTQRNLDKLNTELKDVHNIMTKNINEVLGRGERLDAVETKSYRLTSESKKYSESAKHANRMRLLRTYGPAGVILFV 231          
BLAST of Ggra8930.t1 vs. uniprot
Match: A0A7S0ZL56 (Hypothetical protein n=2 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZL56_9RHOD)

HSP 1 Score: 186 bits (472), Expect = 3.470e-55
Identity = 95/135 (70.37%), Postives = 116/135 (85.93%), Query Frame = 0
Query:   41 KKMTFDYLDELRKEFFQVYGNQVQSASRPYEFIRFDTFIQKTKKVYNDSKTQRNLQKLNSELKDVHSIMTKNINEVISRGERLENVAQKSTRLAQESKRYAAQAKHANRMRIVRQYAPIGIVVAVVVLPEKKLIW 175
            +++ +DYLDELRKEFF +YG QV SA+RPYEFIRFDTFIQKTKK+Y DS+TQRNL KLNSELKDVHSIM+KNINEV+SRGE+L+ VA+KSTRL  ESK+YA QA HANRMR++R YAP+G+V+  +V     L+W
Sbjct:  106 RRLAYDYLDELRKEFFSMYGAQVGSATRPYEFIRFDTFIQKTKKLYTDSRTQRNLDKLNSELKDVHSIMSKNINEVLSRGEKLDAVAEKSTRLTFESKKYANQATHANRMRVLRTYAPLGVVLFAIVF----LMW 236          
BLAST of Ggra8930.t1 vs. uniprot
Match: A0A7S3EJK2 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EJK2_9RHOD)

HSP 1 Score: 169 bits (427), Expect = 1.630e-48
Identity = 83/123 (67.48%), Postives = 108/123 (87.80%), Query Frame = 0
Query:   41 KKMTFDYLDELRKEFFQVYGNQVQSASRPYEFIRFDTFIQKTKKVYNDSKTQRNLQKLNSELKDVHSIMTKNINEVISRGERLENVAQKSTRLAQESKRYAAQAKHANRMRIVRQYAPIGIVV 163
            +++ +DYLDELR EF  VY +Q+ SASRPYEFIRFD+FIQKTKK+Y DS+T+RNL+KLNS+L+DVHSIMTKNIN++I+RGE L+NV +KS+RL  E++ YA QA HANRMR++R+YAP G+VV
Sbjct:   96 RRLAYDYLDELRNEFLSVYRDQIASASRPYEFIRFDSFIQKTKKLYTDSRTERNLEKLNSDLRDVHSIMTKNINQIITRGENLQNVTEKSSRLGFEAQSYAKQAAHANRMRLIREYAP-GVVV 217          
BLAST of Ggra8930.t1 vs. uniprot
Match: M1VFW8 (Similar to putative vesicle transport protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VFW8_CYAM1)

HSP 1 Score: 164 bits (415), Expect = 1.160e-46
Identity = 102/240 (42.50%), Postives = 138/240 (57.50%), Query Frame = 0
Query:    1 MPKVTLIARLTDGLPLAASMADEKDAYAKELET---------------------------------------------------TLSLQTI-KKMTFDYLDELRKEFFQVYGNQVQSASRPYEFIRFDTFIQKTKKVYNDSKTQRNLQKLNSELKDVHSIMTKNINEVISRGERLENVAQKSTRLAQESKRYAAQAKHANRMRIVRQYAPIGIVVAVVVLPEKKLIWSVKRKSKRSRAVF 188
            MPK+T I+RLTDGLPLAAS+ADEKDA+A EL+                                                    TLS +   +K+ F +LDELR+EF  VYG QV  A+RPYE IRFD+FIQKTKKVY D+   RNL++LNSEL DV  IMT++I EV+ RGERLE++   S  L+ ES++Y  +AKHA  M  +RQY P+ +++ ++ +    L+W  K + + + A F
Sbjct:    1 MPKITFISRLTDGLPLAASLADEKDAFALELQEYERQAKRILKGLTAEYLAGGRGSVPASRKAASIESGAFTFHYLLGDQVAFLTLSEKAYPRKLAFAFLDELRREFEAVYGAQVALANRPYEMIRFDSFIQKTKKVYLDASAVRNLERLNSELLDVRDIMTRSIQEVLGRGERLESLQNTSAMLSAESRKYLRRAKHARWMLRIRQYGPMMVILVIIAV----LLWFFKLRGRGATAGF 236          
BLAST of Ggra8930.t1 vs. uniprot
Match: D8TRR8 (R-SNARE, Sec22-family n=4 Tax=Volvocaceae TaxID=3065 RepID=D8TRR8_VOLCA)

HSP 1 Score: 159 bits (403), Expect = 4.360e-45
Identity = 95/209 (45.45%), Postives = 128/209 (61.24%), Query Frame = 0
Query:    1 MPKVTLIARLTDGLPLAASMADEKDA-------YAKELETTLSLQTI----------------------------------KKMTFDYLDELRKEFFQVYGNQVQSASRPYEFIRFDTFIQKTKKVYNDSKTQRNLQKLNSELKDVHSIMTKNINEVISRGERLENVAQKSTRLAQESKRYAAQAKHANRMRIVRQYAPIGIVVAVVVL 168
            M ++TLIAR+ DGLPLA  +  EKDA        AK L    S Q                                    KK+ F YL+EL  EF ++YG QV S SRPY FI+FDTFIQKTKK+Y D++TQRNL KLN +L +VHSIMT+NI EV+ +GE+L+++A+ S+ LA ESK+YA++AK  +R  ++R+Y P+ +VV VV+L
Sbjct:    1 MVRLTLIARVQDGLPLAEGLDSEKDAEIDAYKSQAKSLLKKFSQQPSHQAARLSVESGKYTFHYLIDGGVCYLTLTEKGYPKKLAFQYLEELTNEFSRLYGQQVHSVSRPYAFIKFDTFIQKTKKLYLDTRTQRNLSKLNDDLAEVHSIMTRNIQEVLGQGEKLDSMAKMSSTLAAESKQYASRAKDLHRQALIRKYVPLAVVVGVVLL 209          
BLAST of Ggra8930.t1 vs. uniprot
Match: A0A022RZE9 (Uncharacterized protein n=2 Tax=Lamiales TaxID=4143 RepID=A0A022RZE9_ERYGU)

HSP 1 Score: 158 bits (399), Expect = 1.690e-44
Identity = 93/218 (42.66%), Postives = 135/218 (61.93%), Query Frame = 0
Query:    1 MPKVTLIARLTDGLPLAASMADEKD------------AYAKELE------TTLSLQT-----------------------IKKMTFDYLDELRKEFFQVYGNQVQSASRPYEFIRFDTFIQKTKKVYNDSKTQRNLQKLNSELKDVHSIMTKNINEVISRGERLENVAQKSTRLAQESKRYAAQAKHANRMRIVRQYAPIGIVVAVV--VLPEKKLIW 175
            M K+T+IAR+TDGLPL   + D +D            A  K L       + +S++T                        KK+ + YL++L+ EF +VYGNQ+++A+RPY FI+FDTFIQKTKK+Y D++TQRN+ KLN EL +VH IMT+N+ EV+  GE+L+ V+Q S+RL  ES+ YA +AK  NR  ++R++AP+ +V+ VV  +L  KK IW
Sbjct:    1 MVKITMIARVTDGLPLVEGLDDGRDMPDADFYKQQVKALFKNLSRGQNEPSRMSIETGPYIFHHIIEGRVCYLTMCDRSYPKKLAYQYLEDLKNEFERVYGNQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNVSKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKAKDLNRQALIRKWAPVAVVLGVVFFLLWVKKKIW 218          
BLAST of Ggra8930.t1 vs. uniprot
Match: A0A6I9SRT6 (25.3 kDa vesicle transport protein n=9 Tax=Mesangiospermae TaxID=1437183 RepID=A0A6I9SRT6_SESIN)

HSP 1 Score: 158 bits (399), Expect = 1.690e-44
Identity = 91/220 (41.36%), Postives = 137/220 (62.27%), Query Frame = 0
Query:    1 MPKVTLIARLTDGLPLAASMADEKDA-----YAKELETT-------------LSLQT-----------------------IKKMTFDYLDELRKEFFQVYGNQVQSASRPYEFIRFDTFIQKTKKVYNDSKTQRNLQKLNSELKDVHSIMTKNINEVISRGERLENVAQKSTRLAQESKRYAAQAKHANRMRIVRQYAPIGIVVAVVVLPEKKLIWSVKR 179
            M K+T+IAR+TDGLPLA  + D +D      Y +++++              +S++T                        KK++F YL++L+ EF + YGNQ+++A+RPY FI+FDTFIQKTKK+Y D++TQRN+ KLN EL +VH IMT+N+ EV+  GE+L+ V+Q S+RL  ES+ YA +AK  NR  ++R++AP+ +V+ VV L    L W  K+
Sbjct:    1 MVKLTMIARVTDGLPLAEGLDDGRDVPDSDFYKQQVKSLFKNLSRGQNEPSRMSIETGPYIFHYIIEGRVCYLTMCDRSYPKKLSFQYLEDLKNEFERAYGNQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKAKDLNRQALIRKWAPVAVVLGVVFL----LFWVRKK 216          
BLAST of Ggra8930.t1 vs. uniprot
Match: A8IYP2 (R-SNARE protein, Sec22-family n=3 Tax=Chlamydomonadales TaxID=3042 RepID=A8IYP2_CHLRE)

HSP 1 Score: 157 bits (398), Expect = 2.460e-44
Identity = 93/209 (44.50%), Postives = 128/209 (61.24%), Query Frame = 0
Query:    1 MPKVTLIARLTDGLPLAASMADEKD-------AYAKELETTLSLQTI----------------------------------KKMTFDYLDELRKEFFQVYGNQVQSASRPYEFIRFDTFIQKTKKVYNDSKTQRNLQKLNSELKDVHSIMTKNINEVISRGERLENVAQKSTRLAQESKRYAAQAKHANRMRIVRQYAPIGIVVAVVVL 168
            M ++TLIAR+ DGLPLA  +  EKD       + AK L    S Q                                    KK+ F YL+EL  EF ++YG QV + SRPY FI+FDTFIQKTKK+Y D++TQRNL KLN +L +VHSIMT+NI EV+ +GE+L+N+A+ S+ LA ESK+YA +AK  +R  ++R++ P+G+VV +V+L
Sbjct:    1 MVRLTLIARVQDGLPLAEGLDSEKDVEIDKYKSQAKSLLKKFSQQPSHQAARLSVESGAYTFHYLLDAGVCYLTLTEKGYPKKLAFQYLEELTNEFSRLYGPQVHTVSRPYAFIKFDTFIQKTKKLYMDTRTQRNLSKLNDDLAEVHSIMTRNIQEVLGQGEKLDNMAKMSSTLAAESKQYATRAKDLHRQALLRKWVPLGVVVGIVLL 209          
The following BLAST results are available for this feature:
BLAST of Ggra8930.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J4845.450e-8670.6425.3 kDa vesicle transport protein n=1 Tax=Gracila... [more]
R7QEE35.910e-7183.57Putative vesicle transport protein n=1 Tax=Chondru... [more]
A0A5J4YNY62.020e-5748.9225.3 kDa vesicle transport protein n=1 Tax=Porphyr... [more]
A0A7S0ZL563.470e-5570.37Hypothetical protein n=2 Tax=Timspurckia oligopyre... [more]
A0A7S3EJK21.630e-4867.48Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
M1VFW81.160e-4642.50Similar to putative vesicle transport protein n=1 ... [more]
D8TRR84.360e-4545.45R-SNARE, Sec22-family n=4 Tax=Volvocaceae TaxID=30... [more]
A0A022RZE91.690e-4442.66Uncharacterized protein n=2 Tax=Lamiales TaxID=414... [more]
A0A6I9SRT61.690e-4441.3625.3 kDa vesicle transport protein n=9 Tax=Mesangi... [more]
A8IYP22.460e-4444.50R-SNARE protein, Sec22-family n=3 Tax=Chlamydomona... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.450.50Longin domaincoord: 33..86
e-value: 5.9E-15
score: 57.2
NoneNo IPR availableGENE3D1.20.5.110coord: 90..173
e-value: 1.2E-13
score: 52.6
NoneNo IPR availablePANTHERPTHR45837:SF3VESICLE-TRAFFICKING PROTEIN SEC22Bcoord: 39..168
NoneNo IPR availablePANTHERPTHR45837:SF3VESICLE-TRAFFICKING PROTEIN SEC22Bcoord: 1..28
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 156..175
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 176..250
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..155
NoneNo IPR availableCDDcd15866R-SNARE_SEC22coord: 92..155
e-value: 2.53929E-26
score: 95.2791
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 89..155
IPR042855v-SNARE, coiled-coil homology domainPFAMPF00957Synaptobrevincoord: 92..168
e-value: 1.2E-16
score: 60.3
IPR042855v-SNARE, coiled-coil homology domainPROSITEPS50892V_SNAREcoord: 94..154
score: 14.507846
IPR010908Longin domainPFAMPF13774Longincoord: 41..77
e-value: 4.0E-6
score: 26.7
IPR010908Longin domainPROSITEPS50859LONGINcoord: 41..79
score: 9.839624
IPR010908Longin domainCDDcd14824Longincoord: 5..86
e-value: 2.04429E-13
score: 63.0437
IPR044565Vesicle-trafficking protein Sec22PANTHERPTHR45837VESICLE-TRAFFICKING PROTEIN SEC22Bcoord: 39..168
IPR044565Vesicle-trafficking protein Sec22PANTHERPTHR45837VESICLE-TRAFFICKING PROTEIN SEC22Bcoord: 1..28
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 3..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:851085..852493 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8930.t1Ggra8930.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 851085..852493 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8930.t1 ID=Ggra8930.t1|Name=Ggra8930.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=251bp
MPKVTLIARLTDGLPLAASMADEKDAYAKELETTLSLQTIKKMTFDYLDE
LRKEFFQVYGNQVQSASRPYEFIRFDTFIQKTKKVYNDSKTQRNLQKLNS
ELKDVHSIMTKNINEVISRGERLENVAQKSTRLAQESKRYAAQAKHANRM
RIVRQYAPIGIVVAVVVLPEKKLIWSVKRKSKRSRAVFPRLQWIPPRNNA
CLRNEGRNISICIRRSDNIPPCDMIRNEIVGVLENTFLVDNHMLNRFSYM
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042855V_SNARE_CC
IPR010908Longin_dom
IPR044565Sec22
IPR011012Longin-like_dom_sf