Ggra893.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra893.t1
Unique NameGgra893.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length369
Homology
BLAST of Ggra893.t1 vs. uniprot
Match: A0A2V3IEY8 (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEY8_9FLOR)

HSP 1 Score: 251 bits (640), Expect = 2.200e-75
Identity = 139/367 (37.87%), Postives = 212/367 (57.77%), Query Frame = 0
Query:    4 EGFRRLCNTASQFLRLCVAHRICEKHDVYRVNIIFECIEEFKIVERFINFHLANRSFVLVQRKSRHLRKLCDFAQTLRVMADESTSITRVSKFLDMVIKASRSEKQINRPESRVRLVNGHLFMKLCFQHSLKELEGLMTRYYS---KDPGGQLICQPLLMFISSWARAFVTFISVCSGGQCPQAIAGIEVGSVANLENAVAKAAKTGFVELTTLHGKRTDTLDHPTVTLTAVSVRILRFQVTVVHPLIMSEMNGIVSQNCFRTLLVNQSTGKPFNSPAISYQFRKFVTENCKTKLFFSIMDMRRCCLDIFLTGFRERKVLKSHSEGKFLDSMARYMNTSSDQVKKWVGVHGSAEHEATGKELTRLLD 367
            + FRRL NT SQFLRLC++  +C ++D Y+++ +F  +   ++V+RF++FH+   S   VQRK+RHL+K+C  A  L      S S+ RVS++LD VI A   +    RP  +V+  N    +K CF+ +  +L  ++ +Y S   +DP  +     L  F+S W   FV ++ + SGGQ P  I+ +EV     LE  +  AA  G V+  +L G+R   L  P V+LTA S R +RFQV V+ P+I S  + +      R LLV+  +G       +SY+F K+  + C      S+  ++R  + +FL GFRE ++   H+EG+ LD +AR++NT+S QVKK VGV GSAE++A   EL R L+
Sbjct:  146 DEFRRLSNTVSQFLRLCISRGVCRRNDAYQMDALFGTVAVLEVVQRFVDFHVECFSPRTVQRKARHLKKVCMLASGLARSMSRSASLERVSRYLDDVISAYLRKTGAKRPPQKVKPTNSLHLLKTCFRLAHADLNDMIAQYNSESGRDP--EYSSLALANFVSKWTCTFVAYVVIGSGGQNPLTISEMEVPGDEELEGILENAATAGSVQFESLRGRRAAALGLPMVSLTAKSARFIRFQVKVILPIISSLTHEVQLTGTSRPLLVSTRSGMRMRPWQVSYEFHKYADQRCPEMSSVSLSSLKRSAMSVFLKGFRENELFHGHTEGQVLDVLARHLNTTSTQVKKCVGVRGSAEYKAIASELARCLE 510          
BLAST of Ggra893.t1 vs. uniprot
Match: A0A2V3IG72 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG72_9FLOR)

HSP 1 Score: 154 bits (390), Expect = 8.690e-41
Identity = 108/337 (32.05%), Postives = 163/337 (48.37%), Query Frame = 0
Query:   34 VNIIFECIEEFKIVERFINFHLANRSFVLVQRKSRHLRKLCDFAQTLRVMADESTSITRVSKFLDMVIKASRSEKQINRPESRVRLVNGHLFMKLCFQHSLKELEGLMTRYYS---KDPGGQLICQPLLMFISSWARAFVTFISVCSGGQCPQAIAGIEVGSVANLENAVAKAAKTGFVELTTLHGKRTDTLDHPTVTLTAVSVRILRFQVTVVHPLIMSEMNGIVSQNCFRTLLVNQSTGKPFNSPAISYQFRKFVTENCKTKLFFSIMDMRRCCLDIFLTGFRERKVLKSHSEGKFLDSMARYMNTSSDQVKKWVGVHGSAEHEATGKELTRLLD 367
            ++ +F  +   ++V+RF++FH+   S   VQRK+RHL+K+C  A  L      S S+ RVS++LD VI A   +    RP  +V+  N    +K CF+ +  +L  ++ +Y S   +DP  +     L  F+S W   FV ++ + SGGQ P  I+ +EV     LE  +  AA  G V+  +L G+R   L  P                  +H     E     +  C   L ++Q      +     + F KFV   C  +               FL GFRE ++   H+EG+ LD +AR++NT+S QVKK VGV GSAEH+A   EL R L+
Sbjct:    1 MDALFGTVAVLEVVQRFVDFHVECFSPRTVQRKARHLKKVCMLASGLARSMSRSASLERVSRYLDDVISAYLRKTGAKRPPQKVKPTNSLHLLKTCFRLAHADLNDMIAQYNSESGRDP--EYSSLALANFVSKWTCTFVAYVVIGSGGQNPLTISEMEVPGDEELEGILENAATAGSVQFESLRGRRAAALGLP------------------MHE----ERYAYEAMACI--LRISQVRRSEVSRNV--FCFPKFVKTQCNER---------------FLKGFRENELFHGHTEGQVLDVLARHLNTTSTQVKKCVGVRGSAEHKAIASELARCLE 294          
The following BLAST results are available for this feature:
BLAST of Ggra893.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IEY82.200e-7537.87Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
A0A2V3IG728.690e-4132.05Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000231_piloncontigtig00000231_pilon:85233..86339 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra893.t1Ggra893.t1Gracilaria gracilis GNS1m malemRNAtig00000231_pilon 85233..86339 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra893.t1 ID=Ggra893.t1|Name=Ggra893.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=369bp
MDGEGFRRLCNTASQFLRLCVAHRICEKHDVYRVNIIFECIEEFKIVERF
INFHLANRSFVLVQRKSRHLRKLCDFAQTLRVMADESTSITRVSKFLDMV
IKASRSEKQINRPESRVRLVNGHLFMKLCFQHSLKELEGLMTRYYSKDPG
GQLICQPLLMFISSWARAFVTFISVCSGGQCPQAIAGIEVGSVANLENAV
AKAAKTGFVELTTLHGKRTDTLDHPTVTLTAVSVRILRFQVTVVHPLIMS
EMNGIVSQNCFRTLLVNQSTGKPFNSPAISYQFRKFVTENCKTKLFFSIM
DMRRCCLDIFLTGFRERKVLKSHSEGKFLDSMARYMNTSSDQVKKWVGVH
GSAEHEATGKELTRLLDC*
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