Ggra8928.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8928.t1
Unique NameGgra8928.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length146
Homology
BLAST of Ggra8928.t1 vs. uniprot
Match: A0A2V3J4C1 (Actophorin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4C1_9FLOR)

HSP 1 Score: 197 bits (502), Expect = 1.010e-62
Identity = 86/145 (59.31%), Postives = 120/145 (82.76%), Query Frame = 0
Query:    1 MASGVAVDGKVLTTFKGIMSREHRAAIFKINDTMTEVQLEKTVPIAEGAPQPNWESFIKQLPDTDCRFIAYDFVYEHQGANKNRVLFILWSPEESKIKSKMIYASSQDGVVNHLEGVQRSLQINDRDDLQYMTISKKLAQHTAGY 145
            M+SGVAVD KV++ FK IMSR+ RAAIFKIN  +T +++E T P+  GAP+ +W++  K+LP+TDCR++AYDF YEHQGA KNR++F+LWSP+ +  KSKM+YA+S++G+V+ L+GVQR+++ ND D++ Y  ISKKLAQHTAGY
Sbjct:    1 MSSGVAVDNKVVSIFKEIMSRKFRAAIFKINGDLTLIEVEDTAPVEAGAPKGSWDAMCKKLPETDCRYLAYDFEYEHQGAKKNRIIFVLWSPDSAPTKSKMVYAASREGIVSQLQGVQRAIEANDDDEIDYNAISKKLAQHTAGY 145          
BLAST of Ggra8928.t1 vs. uniprot
Match: R7QGC0 (ADF-H domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGC0_CHOCR)

HSP 1 Score: 179 bits (453), Expect = 2.980e-55
Identity = 84/146 (57.53%), Postives = 110/146 (75.34%), Query Frame = 0
Query:    1 MASGVAVDGKVLTTFKGIMS-REHRAAIFKINDTMTEVQLEKTVPIAEGAPQPNWESFIKQLPDTDCRFIAYDFVYEHQGANKNRVLFILWSPEESKIKSKMIYASSQDGVVNHLEGVQRSLQINDRDDLQYMTISKKLAQHTAGY 145
            MASGV VD K +   + ++  R+ R A+F+I+D M+ V+LEKT   ++ +P+ +W+SF K LP+ DCR+I YDF Y HQGA K RVLF+LWSPE SK+KSKMIYASSQ+GVVN  EG+QR LQ  D +DL+Y  I+K+LA HTAGY
Sbjct:    1 MASGVQVDAKCVDAIQALVKGRKFRGAVFRISDDMSLVELEKTYDPSDASPKADWDSFTKDLPEKDCRYIVYDFSYVHQGATKQRVLFVLWSPEYSKVKSKMIYASSQEGVVNKFEGIQRQLQCTDAEDLEYDVIAKQLAAHTAGY 146          
BLAST of Ggra8928.t1 vs. uniprot
Match: A0A7S1XF39 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XF39_9RHOD)

HSP 1 Score: 165 bits (418), Expect = 6.280e-50
Identity = 81/146 (55.48%), Postives = 106/146 (72.60%), Query Frame = 0
Query:    1 MASGVAVDGK-VLTTFKGIMSREHRAAIFKINDTMTEVQLEKTVPIAEGAPQPNWESFIKQLPDTDCRFIAYDFVYEHQGANKNRVLFILWSPEESKIKSKMIYASSQDGVVNHLEGVQRSLQINDRDDLQYMTISKKLAQHTAGY 145
            MASGV VD + ++ T   +  R++RA I KIND+MT V++EKT P+A G  + ++    K LP+ DCR++ YDF YE QG NKN+V+F+LWSPE SK+KSKMIYASSQ+GVVN L+G+ R LQ  D D+L Y  I+K L QHTA Y
Sbjct:    1 MASGVGVDQQCIVDTQHLVKERKYRAVILKINDSMTLVEVEKTFPVAHGDAKTHYMEVAKTLPEDDCRYLVYDFEYEMQGINKNKVVFLLWSPECSKVKSKMIYASSQEGVVNALQGISRQLQATDVDELDYAHIAKHLKQHTASY 146          
BLAST of Ggra8928.t1 vs. uniprot
Match: A0A1X6PG98 (ADF-H domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PG98_PORUM)

HSP 1 Score: 164 bits (414), Expect = 2.630e-49
Identity = 76/147 (51.70%), Postives = 106/147 (72.11%), Query Frame = 0
Query:    1 MASGVAVDGKVLTTFKGIMS-REHRAAIFKINDTMTEVQLEKTVPIAEGAPQPNWESFIKQLPDTDCRFIAYDFVYEHQGANKNRVLFILWSPEESKIKSKMIYASSQDGVVNHL-EGVQRSLQINDRDDLQYMTISKKLAQHTAGY 145
            MASGVAV+   +T    ++  R+HRA +F IND MTE++LEKT P    + Q  ++ F K LPD  CR+  YDF YEHQGA KNR++F+LWS + +K+++K+IY+SS +G+V+ L  GVQR +Q+ DRD+L +  +SKKL QHTAGY
Sbjct:    1 MASGVAVNPTCVTAMNDLVKERKHRAVVFAINDDMTEIKLEKTFPPNASSAQAGYDEFTKSLPDDSCRYAVYDFEYEHQGAKKNRIIFVLWSSDLAKVRTKLIYSSSAEGLVSKLGAGVQRQIQVTDRDELSFSEVSKKLVQHTAGY 147          
BLAST of Ggra8928.t1 vs. uniprot
Match: A0A6T6CIG9 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6CIG9_9RHOD)

HSP 1 Score: 158 bits (399), Expect = 5.160e-47
Identity = 80/148 (54.05%), Postives = 104/148 (70.27%), Query Frame = 0
Query:    1 MASGVAVDGKVLTTFKGIM-SREHRAAIFKINDTMTEVQLEKTV-PIAEGAP-QPNWESFIKQLPDTDCRFIAYDFVYEHQGANKNRVLFILWSPEESKIKSKMIYASSQDGVVNHLEGVQRSLQINDRDDLQYMTISKKLAQHTAGY 145
            MASGVAVD K +  F+ ++ SR++R  + KIND MT + +E+T+ PI +G      W  F K LP+ DCR+I YDF YE QG  KNRV+F+LWSPE SK+KSKMIYASSQ+G VN +EG+QR LQ  D D++ Y  I+ +L Q TA Y
Sbjct:    1 MASGVAVDPKCVEEFQALVRSRKYRGLVMKINDEMTSIGVERTLSPIQQGDKVDAKWTEFTKTLPENDCRYIVYDFEYEMQGIKKNRVIFMLWSPEYSKVKSKMIYASSQEGCVNAMEGIQRQLQSCDMDEMAYEYIANQLKQFTASY 148          
BLAST of Ggra8928.t1 vs. uniprot
Match: A0A7S1TF15 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TF15_9RHOD)

HSP 1 Score: 145 bits (366), Expect = 4.990e-42
Identity = 68/146 (46.58%), Postives = 98/146 (67.12%), Query Frame = 0
Query:    1 MASGVAVDGKVLTTFKGIMS-REHRAAIFKINDTMTEVQLEKTVPIAEGAPQPNWESFIKQLPDTDCRFIAYDFVYEHQGANKNRVLFILWSPEESKIKSKMIYASSQDGVVNHLEGVQRSLQINDRDDLQYMTISKKLAQHTAGY 145
            MASG+ +D + L     ++  R++RA + +IND MT V++E+ +P   G+ +  +    K LP  DCRF  YDF +E QG  KN+V+FILWSPE SK++SKMIYA+SQ+GV+  L+G+ R +Q  D D+L Y  ++  L QHTAGY
Sbjct:    1 MASGLGLDPQCLEETNALVKGRKYRAIVLRINDKMTSVEVERVLPTVPGSVKAAYMELTKSLPANDCRFFIYDFEFEMQGITKNKVVFILWSPEYSKVRSKMIYAASQEGVLTALDGISRQMQATDLDELSYDYVAAHLRQHTAGY 146          
BLAST of Ggra8928.t1 vs. uniprot
Match: A0A5J4YTF8 (Cofilin n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YTF8_PORPP)

HSP 1 Score: 145 bits (366), Expect = 7.870e-42
Identity = 65/131 (49.62%), Postives = 92/131 (70.23%), Query Frame = 0
Query:    1 MASGVAVDGKVLTTFKGIMSREHRAAIFKINDTMTEVQLEKTVPIAEG---APQPNWESFIKQLPDTDCRFIAYDFVYEHQGANKNRVLFILWSPEESKIKSKMIYASSQDGVVNHLEGVQRSLQINDRDD 128
            M+SGVAVD   + +F G+  R+ RA + KIND MT++++EKT+P   G     +  W+  I  LP+ DCRF+ YDF+YEHQG  K++++F+ W+PE +KIKSK IYASSQ+G +N +EGV R LQ  D D+
Sbjct:    1 MSSGVAVDPSCIESFNGLKKRDVRAVVMKINDGMTKIEVEKTMPTGSGDVGTAEAEWKECIDSLPENDCRFLLYDFLYEHQGLPKSKIVFLKWAPETAKIKSKTIYASSQEGCLNQMEGVGRQLQATDEDE 131          
BLAST of Ggra8928.t1 vs. uniprot
Match: M2VTA1 (Cofilin /actin depolymerizing factor n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VTA1_GALSU)

HSP 1 Score: 135 bits (340), Expect = 5.260e-38
Identity = 63/145 (43.45%), Postives = 101/145 (69.66%), Query Frame = 0
Query:    1 MASGVAVD---GKVLTTFKGIMSREHRAAIFKINDTMTEVQLEKTVP---IAEGAPQPNWESFIKQLPDTDCRFIAYDFVYE-HQGANKNRVLFILWSPEESKIKSKMIYASSQDGVVNHLEGVQRSLQINDRDDLQYMTISKKL 138
            MASGVAVD   GK  T       R++RA +FK++D ++ V +EKT+P   I +   Q +W+ F+ +LP+ DCRF  YDF Y+  +G +KNR++F+LWSPE +KIKSKM+Y+SS++ +V  L GVQ+ +Q  D+D++++  + +++
Sbjct:    1 MASGVAVDDICGKEFTVLVRSTPRKYRAIVFKLSDDLSSVCVEKTLPSSNITKCTAQEDWKKFVTELPENDCRFAVYDFEYQTSEGVSKNRIIFVLWSPESAKIKSKMLYSSSREALVQKLNGVQKEIQATDQDEIEFHNVYQQV 145          
BLAST of Ggra8928.t1 vs. uniprot
Match: A0A1X6P6I6 (ADF-H domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P6I6_PORUM)

HSP 1 Score: 126 bits (316), Expect = 1.700e-34
Identity = 58/142 (40.85%), Postives = 98/142 (69.01%), Query Frame = 0
Query:    1 MASGVAVDGKVLTTFKGIM-SREHRAAIFKINDTMTEVQLEKTVPIAEGAPQPNWESFIKQLPDTDCRFIAYDFVYEHQGA-NKNRVLFILWSPEESKIKSKMIYASSQDGVVNHLEGVQRSLQINDRDDLQYMTISKKLAQ 140
            MASG+AV+ K +  ++ +  +R HRA I KIND M+EV ++  +P ++G  + +W+ F+K LP++DCR++  DF ++ Q    K+++  ILWSPE S+++SKMIYA+SQ+ V + +  VQR LQ  + ++L+Y  I  ++A+
Sbjct:    1 MASGIAVNDKCIQEYQALSRARTHRAVILKINDDMSEVVVDSILPKSQGDHEGDWKDFVKLLPESDCRYVVVDFEWKDQPTVTKSKICLILWSPEYSRVRSKMIYAASQEAVASKMADVQRQLQATELEELEYGVIKNQVAK 142          
BLAST of Ggra8928.t1 vs. uniprot
Match: A0A7S1A8Q4 (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A8Q4_NOCSC)

HSP 1 Score: 122 bits (307), Expect = 1.200e-33
Identity = 53/99 (53.54%), Postives = 73/99 (73.74%), Query Frame = 0
Query:   47 EGAPQPNWESFIKQLPDTDCRFIAYDFVYEHQGANKNRVLFILWSPEESKIKSKMIYASSQDGVVNHLEGVQRSLQINDRDDLQYMTISKKLAQHTAGY 145
            EGA    W + +K+LP++DCRF+ YDF YEHQG  K++++F+ W+PE +KIK+KMIYASSQ+G +N +EG+ R LQ  D D+ +Y TI K LA   AGY
Sbjct:    4 EGAASEKWAATVKELPESDCRFLIYDFEYEHQGLPKSKLIFMKWAPETAKIKAKMIYASSQEGCLNSMEGIGRQLQCTDEDEAEYETIVKTLAATQAGY 102          
The following BLAST results are available for this feature:
BLAST of Ggra8928.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J4C11.010e-6259.31Actophorin n=1 Tax=Gracilariopsis chorda TaxID=448... [more]
R7QGC02.980e-5557.53ADF-H domain-containing protein n=1 Tax=Chondrus c... [more]
A0A7S1XF396.280e-5055.48Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1X6PG982.630e-4951.70ADF-H domain-containing protein n=1 Tax=Porphyra u... [more]
A0A6T6CIG95.160e-4754.05Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S1TF154.990e-4246.58Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4YTF87.870e-4249.62Cofilin n=1 Tax=Porphyridium purpureum TaxID=35688... [more]
M2VTA15.260e-3843.45Cofilin /actin depolymerizing factor n=1 Tax=Galdi... [more]
A0A1X6P6I61.700e-3440.85ADF-H domain-containing protein n=1 Tax=Porphyra u... [more]
A0A7S1A8Q41.200e-3353.54Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017904ADF/CofilinPRINTSPR00006COFILINcoord: 86..107
score: 63.64
coord: 108..124
score: 29.41
coord: 65..85
score: 37.14
IPR017904ADF/CofilinPANTHERPTHR11913COFILIN-RELATEDcoord: 2..139
IPR017904ADF/CofilinCDDcd11286ADF_cofilin_likecoord: 3..138
e-value: 4.53744E-44
score: 139.229
IPR002108Actin-depolymerising factor homology domainSMARTSM00102adf_2coord: 9..139
e-value: 1.7E-27
score: 107.3
IPR002108Actin-depolymerising factor homology domainPFAMPF00241Cofilin_ADFcoord: 15..137
e-value: 6.9E-29
score: 100.2
IPR002108Actin-depolymerising factor homology domainPROSITEPS51263ADF_Hcoord: 2..139
score: 29.597698
IPR029006ADF-H/Gelsolin-like domain superfamilyGENE3D3.40.20.10Severincoord: 1..143
e-value: 3.9E-42
score: 145.7
NoneNo IPR availablePANTHERPTHR11913:SF12COFILIN/ACTIN-DEPOLYMERIZING FACTOR HOMOLOG-RELATEDcoord: 2..139
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 1..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:839730..840167 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8928.t1Ggra8928.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 839730..840167 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8928.t1 ID=Ggra8928.t1|Name=Ggra8928.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=146bp
MASGVAVDGKVLTTFKGIMSREHRAAIFKINDTMTEVQLEKTVPIAEGAP
QPNWESFIKQLPDTDCRFIAYDFVYEHQGANKNRVLFILWSPEESKIKSK
MIYASSQDGVVNHLEGVQRSLQINDRDDLQYMTISKKLAQHTAGY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017904ADF/Cofilin
IPR002108ADF-H
IPR029006ADF-H/Gelsolin-like_dom_sf