Ggra8920.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra8920.t1
Unique Name	Ggra8920.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	217

Homology

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BLAST of Ggra8920.t1 vs. uniprot
Match: A0A2V3J5L8 (Ras-related protein Rab-2A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5L8_9FLOR)

HSP 1 Score: 404 bits (1038), Expect = 3.420e-142
Identity = 202/210 (96.19%), Postives = 206/210 (98.10%), Query Frame = 0

Query:    7 MSSYAYLFKYIIIGDTGVGKSCLLLQFTDRRFTPIHDLTIGVEFGARIVTVEDKQLKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRKDTFDHILSWLQDAKAHSSSDMTIILVGNKADLEHRREVPRESGEAFAKEHGLLFLETSAKNNTNVEEAFLTTATKIYEKVKAGDLDLSSERHGVKVGASSNAISLLDDATTETKSGCC 216
            MSSYAYLFKYIIIGDTGVGKSCLLLQFTDRRFTPIHDLTIGVEFGARIVTVEDKQLKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRK+TFDHILSWLQDAKAHSSSDMTIILVGNKADLEHRREV  ESGEAFA+EHGLLFLETSAKNNTNVE+AFLTTA KIYEKVKAGDLDLS+ERHGVKVGASSNAISLLDDATTETKS CC
Sbjct:    1 MSSYAYLFKYIIIGDTGVGKSCLLLQFTDRRFTPIHDLTIGVEFGARIVTVEDKQLKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRKETFDHILSWLQDAKAHSSSDMTIILVGNKADLEHRREVSTESGEAFAREHGLLFLETSAKNNTNVEQAFLTTAAKIYEKVKAGDLDLSTERHGVKVGASSNAISLLDDATTETKSACC 210

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BLAST of Ggra8920.t1 vs. uniprot
Match: A0A7S0ZE95 (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZE95_9RHOD)

HSP 1 Score: 330 bits (846), Expect = 2.670e-113
Identity = 159/185 (85.95%), Postives = 175/185 (94.59%), Query Frame = 0

Query:    9 SYAYLFKYIIIGDTGVGKSCLLLQFTDRRFTPIHDLTIGVEFGARIVTVEDKQLKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRKDTFDHILSWLQDAKAHSSSDMTIILVGNKADLEHRREVPRESGEAFAKEHGLLFLETSAKNNTNVEEAFLTTATKIYEKVKAGDLDLSSERHGVK 193
            SYAYLFKYIIIGDTG GKSCLLLQFTD+RFTPIHDLTIGVEFGARIVTVEDKQLKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRK+TF H+LSWL+DA+ HS S+MTIILVGNK+DL+HRREVPRE GEAFAKEHGLLF+ETSAK+N NV++AF+ TA+ IYEKVK G LDL+SE+HGVK
Sbjct:    2 SYAYLFKYIIIGDTGAGKSCLLLQFTDKRFTPIHDLTIGVEFGARIVTVEDKQLKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRKETFAHLLSWLEDARQHSHSNMTIILVGNKSDLDHRREVPREQGEAFAKEHGLLFIETSAKDNINVDDAFMQTASAIYEKVKEGTLDLNSEQHGVK 186

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BLAST of Ggra8920.t1 vs. uniprot
Match: A0A0P7XE91 (Ras-related protein Rab-2A-like n=5 Tax=Euteleostomi TaxID=117571 RepID=A0A0P7XE91_SCLFO)

HSP 1 Score: 307 bits (787), Expect = 6.400e-104
Identity = 144/211 (68.25%), Postives = 181/211 (85.78%), Query Frame = 0

Query:    9 SYAYLFKYIIIGDTGVGKSCLLLQFTDRRFTPIHDLTIGVEFGARIVTVEDKQLKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRKDTFDHILSWLQDAKAHSSSDMTIILVGNKADLEHRREVPRESGEAFAKEHGLLFLETSAKNNTNVEEAFLTTATKIYEKVKAGDLDLSSERHGVKVG---ASSNAISLLDDATTETKSGCC 216
            +YAYLFKYIIIGDTGVGKSCLLLQFTD+RF P+HDLTIGVEFGAR++T++ KQ+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITR+DTF+H+ +WL+DA+ HS+S+M I+L+GNK+DLE RREV RE GEAFA+EHGL+F+ETSAK  +NVEEAF+ TA +IYEK++ G  D+++E +G+K+G   A++NA    +    +   GCC
Sbjct:    2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKREEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHAATNAALSGNQGGLQAGGGCC 212

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BLAST of Ggra8920.t1 vs. uniprot
Match: RAB2A (Ras-related protein Rab-2A n=64 Tax=Amniota TaxID=32524 RepID=RAB2A_HUMAN)

HSP 1 Score: 307 bits (786), Expect = 9.080e-104
Identity = 143/211 (67.77%), Postives = 181/211 (85.78%), Query Frame = 0

Query:    9 SYAYLFKYIIIGDTGVGKSCLLLQFTDRRFTPIHDLTIGVEFGARIVTVEDKQLKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRKDTFDHILSWLQDAKAHSSSDMTIILVGNKADLEHRREVPRESGEAFAKEHGLLFLETSAKNNTNVEEAFLTTATKIYEKVKAGDLDLSSERHGVKVG---ASSNAISLLDDATTETKSGCC 216
            +YAYLFKYIIIGDTGVGKSCLLLQFTD+RF P+HDLTIGVEFGAR++T++ KQ+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITR+DTF+H+ +WL+DA+ HS+S+M I+L+GNK+DLE RREV +E GEAFA+EHGL+F+ETSAK  +NVEEAF+ TA +IYEK++ G  D+++E +G+K+G   A++NA    +    +   GCC
Sbjct:    2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHAATNATHAGNQGGQQAGGGCC 212

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BLAST of Ggra8920.t1 vs. uniprot
Match: RAB2A (Ras-related protein Rab-2A n=65 Tax=Euteleostomi TaxID=117571 RepID=RAB2A_CHICK)

HSP 1 Score: 306 bits (785), Expect = 1.290e-103
Identity = 143/211 (67.77%), Postives = 181/211 (85.78%), Query Frame = 0

Query:    9 SYAYLFKYIIIGDTGVGKSCLLLQFTDRRFTPIHDLTIGVEFGARIVTVEDKQLKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRKDTFDHILSWLQDAKAHSSSDMTIILVGNKADLEHRREVPRESGEAFAKEHGLLFLETSAKNNTNVEEAFLTTATKIYEKVKAGDLDLSSERHGVKVG---ASSNAISLLDDATTETKSGCC 216
            +YAYLFKYIIIGDTGVGKSCLLLQFTD+RF P+HDLTIGVEFGAR++T++ KQ+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITR+DTF+H+ +WL+DA+ HS+S+M I+L+GNK+DLE RREV +E GEAFA+EHGL+F+ETSAK  +NVEEAF+ TA +IYEK++ G  D+++E +G+K+G   A++NA    +    +   GCC
Sbjct:    2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHAATNATLAGNQGGQQAGGGCC 212

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BLAST of Ggra8920.t1 vs. uniprot
Match: K7FZ75 (Uncharacterized protein n=23 Tax=Amniota TaxID=32524 RepID=K7FZ75_PELSI)

HSP 1 Score: 306 bits (784), Expect = 1.830e-103
Identity = 143/211 (67.77%), Postives = 181/211 (85.78%), Query Frame = 0

Query:    9 SYAYLFKYIIIGDTGVGKSCLLLQFTDRRFTPIHDLTIGVEFGARIVTVEDKQLKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRKDTFDHILSWLQDAKAHSSSDMTIILVGNKADLEHRREVPRESGEAFAKEHGLLFLETSAKNNTNVEEAFLTTATKIYEKVKAGDLDLSSERHGVKVG---ASSNAISLLDDATTETKSGCC 216
            +YAYLFKYIIIGDTGVGKSCLLLQFTD+RF P+HDLTIGVEFGAR++T++ KQ+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITR+DTF+H+ +WL+DA+ HS+S+M I+L+GNK+DLE RREV +E GEAFA+EHGL+F+ETSAK  +NVEEAF+ TA +IYEK++ G  D+++E +G+K+G   A++NA    +    +   GCC
Sbjct:    2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVRKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHAATNATLAGNQGGQQAGGGCC 212

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BLAST of Ggra8920.t1 vs. uniprot
Match: RAB2A (Ras-related protein Rab-2A n=7 Tax=Tetrapoda TaxID=32523 RepID=RAB2A_MOUSE)

HSP 1 Score: 306 bits (784), Expect = 1.830e-103
Identity = 143/211 (67.77%), Postives = 181/211 (85.78%), Query Frame = 0

Query:    9 SYAYLFKYIIIGDTGVGKSCLLLQFTDRRFTPIHDLTIGVEFGARIVTVEDKQLKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRKDTFDHILSWLQDAKAHSSSDMTIILVGNKADLEHRREVPRESGEAFAKEHGLLFLETSAKNNTNVEEAFLTTATKIYEKVKAGDLDLSSERHGVKVG---ASSNAISLLDDATTETKSGCC 216
            +YAYLFKYIIIGDTGVGKSCLLLQFTD+RF P+HDLTIGVEFGAR++T++ KQ+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITR+DTF+H+ +WL+DA+ HS+S+M I+L+GNK+DLE RREV +E GEAFA+EHGL+F+ETSAK  +NVEEAF+ TA +IYEK++ G  D+++E +G+K+G   A++NA    +    +   GCC
Sbjct:    2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHAATNASHGSNQGGQQAGGGCC 212

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BLAST of Ggra8920.t1 vs. uniprot
Match: RAB2A (Ras-related protein Rab-2A n=4 Tax=Boreoeutheria TaxID=1437010 RepID=RAB2A_RABIT)

HSP 1 Score: 305 bits (782), Expect = 3.690e-103
Identity = 142/211 (67.30%), Postives = 180/211 (85.31%), Query Frame = 0

Query:    9 SYAYLFKYIIIGDTGVGKSCLLLQFTDRRFTPIHDLTIGVEFGARIVTVEDKQLKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRKDTFDHILSWLQDAKAHSSSDMTIILVGNKADLEHRREVPRESGEAFAKEHGLLFLETSAKNNTNVEEAFLTTATKIYEKVKAGDLDLSSERHGVKVG---ASSNAISLLDDATTETKSGCC 216
            +YAYLFKYIIIGDTGVGKSCLLLQFTD+RF P+HDLTIGVEFGAR++T++ KQ+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITR+DTF+H+ +WL+DA+ HS+S+M I+L+GNK+DLE RREV +E GEAFA+EHGL+F+ETSAK  +NVEEAF+ TA +IYEK++ G  D+++E +G+K+G    ++NA    +    +   GCC
Sbjct:    2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHGATNATHAGNQGGQQAGGGCC 212

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BLAST of Ggra8920.t1 vs. uniprot
Match: A0A3B3SBN4 (RAB2A, member RAS oncogene family n=2 Tax=Osteoglossiformes TaxID=41712 RepID=A0A3B3SBN4_9TELE)

HSP 1 Score: 305 bits (782), Expect = 3.690e-103
Identity = 143/211 (67.77%), Postives = 181/211 (85.78%), Query Frame = 0

Query:    9 SYAYLFKYIIIGDTGVGKSCLLLQFTDRRFTPIHDLTIGVEFGARIVTVEDKQLKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRKDTFDHILSWLQDAKAHSSSDMTIILVGNKADLEHRREVPRESGEAFAKEHGLLFLETSAKNNTNVEEAFLTTATKIYEKVKAGDLDLSSERHGVKVG---ASSNAISLLDDATTETKSGCC 216
            +YAYLFKYIIIGDTGVGKSCLLLQFTD+RF P+HDLTIGVEFGAR++T++ KQ+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITR+DTF+H+ +WL+DA+ HS+S+M I+L+GNK+DLE RREV +E GEAFA+EHGL+F+ETSAK  +NVEEAF+ TA +IYEK++ G  D+++E +G+K+G   A++NA    +    +   GCC
Sbjct:    2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGIFDINNEANGIKIGPQHAATNAALGGNQGGQQAGGGCC 212

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BLAST of Ggra8920.t1 vs. uniprot
Match: A0A267DXR9 (Uncharacterized protein n=4 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267DXR9_9PLAT)

HSP 1 Score: 305 bits (781), Expect = 5.240e-103
Identity = 141/187 (75.40%), Postives = 170/187 (90.91%), Query Frame = 0

Query:    9 SYAYLFKYIIIGDTGVGKSCLLLQFTDRRFTPIHDLTIGVEFGARIVTVEDKQLKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRKDTFDHILSWLQDAKAHSSSDMTIILVGNKADLEHRREVPRESGEAFAKEHGLLFLETSAKNNTNVEEAFLTTATKIYEKVKAGDLDLSSERHGVKVG 195
            SYAYLFKYIIIGDTGVGKSCLLLQFTD+RF P+HDLTIGVEFGAR+++++ KQ+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITR+DTF+H+ +WLQDA+ HSSS+M I+L+GNK+DL+ RR+V RE GEAFAKEHGL+F+ETSAK   NVEEAF+ TA  IYEK++ G LD+S+E +G+K+G
Sbjct:    2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLQDARQHSSSNMVIMLIGNKSDLDSRRDVKREEGEAFAKEHGLIFMETSAKTAANVEEAFIDTAKAIYEKIQEGVLDISNEANGIKIG 188

The following BLAST results are available for this feature:

BLAST of Ggra8920.t1 vs. uniprot

BLAST of Ggra8920.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2V3J5L8	3.420e-142	96.19	Ras-related protein Rab-2A n=1 Tax=Gracilariopsis ...	[more]
A0A7S0ZE95	2.670e-113	85.95	Hypothetical protein (Fragment) n=1 Tax=Timspurcki...	[more]
A0A0P7XE91	6.400e-104	68.25	Ras-related protein Rab-2A-like n=5 Tax=Euteleosto...	[more]
RAB2A	9.080e-104	67.77	Ras-related protein Rab-2A n=64 Tax=Amniota TaxID=...	[more]
RAB2A	1.290e-103	67.77	Ras-related protein Rab-2A n=65 Tax=Euteleostomi T...	[more]
K7FZ75	1.830e-103	67.77	Uncharacterized protein n=23 Tax=Amniota TaxID=325...	[more]
RAB2A	1.830e-103	67.77	Ras-related protein Rab-2A n=7 Tax=Tetrapoda TaxID...	[more]
RAB2A	3.690e-103	67.30	Ras-related protein Rab-2A n=4 Tax=Boreoeutheria T...	[more]
A0A3B3SBN4	3.690e-103	67.77	RAB2A, member RAS oncogene family n=2 Tax=Osteoglo...	[more]
A0A267DXR9	5.240e-103	75.40	Uncharacterized protein n=4 Tax=Macrostomum lignan...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 152..174 score: 46.73 coord: 37..53 score: 32.83 coord: 55..77 score: 50.95 coord: 14..35 score: 51.86 coord: 117..130 score: 51.38
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 e-value: 2.8E-35 score: 133.2
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 e-value: 3.7E-103 score: 358.7
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..211 e-value: 5.4E-6 score: 35.5
None	No IPR available	PANTHER	PTHR47979:SF12	RAS-RELATED PROTEIN RAB-2A	coord: 9..204
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 9..204
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..216 score: 35.686382
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..175 score: 8.864239
None	No IPR available	CDD	cd01866	Rab2	coord: 10..177 e-value: 1.77836E-116 score: 327.072
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..178 e-value: 1.1E-10 score: 17.4
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..175 e-value: 4.7E-60 score: 201.9
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 8..204 score: 19.475561
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 14..168 e-value: 5.5E-29 score: 99.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 4..198 e-value: 6.2E-70 score: 236.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 10..184

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000860_pilon	contig	tig00000860_pilon:817704..818500 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra8920.t1	Ggra8920.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000860_pilon 817704..818500 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra8920.t1 ID=Ggra8920.t1|Name=Ggra8920.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=217bp
MLPPADMSSYAYLFKYIIIGDTGVGKSCLLLQFTDRRFTPIHDLTIGVEF
GARIVTVEDKQLKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRKDT
FDHILSWLQDAKAHSSSDMTIILVGNKADLEHRREVPRESGEAFAKEHGL
LFLETSAKNNTNVEEAFLTTATKIYEKVKAGDLDLSSERHGVKVGASSNA
ISLLDDATTETKSGCC*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase