Ggra8913.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8913.t1
Unique NameGgra8913.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length442
Homology
BLAST of Ggra8913.t1 vs. uniprot
Match: A0A2V3J7S9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J7S9_9FLOR)

HSP 1 Score: 299 bits (766), Expect = 3.740e-94
Identity = 176/423 (41.61%), Postives = 237/423 (56.03%), Query Frame = 0
Query:   14 VLFLSRLANAQPLCNTQLQLSLFLDESYSANANLIRFGVPSEAVGVFYNDALRYLAQHCKCGSTLLDETCVDTKFNSDKEVSSLRAVVDSDEGIA-------------NASKLFRLYDSQKTLYDLTKTQEESFKLGLELVNLNTHDLDIILSLGWQGVQFPSDDSFFQDDSLAQKTACSSYSPVTLRDEFKYPASAATAYVLSLVQNVRRAGGNLTIAYELLANHTSLVFNGVRCQKLSGDKLKIPIEYMRDYKNQAQKLLDESKGETSSVDLNDVRGVSSDAKLYLHPLVQKFSSLISYGDSETVLYTRSGLLGGELVERISVDTVLQNDLSLIASSSLLGSIVSGISATTQNAHRGTCSAGWIFVSRAVSLMSADEECCSDKCELLGLSLSDPFLWSIEQEDCCANCNLFVCQHQTLLPE 423
            V+ ++R     P C + + L+ FL  S+  NA+LIRFGVPSE V  +Y+ A+  +A+ C C S  +DETCV   F    E+S L+  +D+D  ++             N  KLF LYD  KTL  L+ TQ E     L  +   +  +  I S  WQ  +FPSD++FFQD   +QK AC  Y   +  D   +PA AATAYV+ LVQ VR+A G ++ A ++LA H S VFNG RC +++G KL IP+  M +Y   AQKLL+E+   +  + LND+R VS  +  +   LV K SSL S GD  TVL T      G  +ER  V+T+L  D        LLG I  G +A         C   WI VSR + L + DE+CC +KCE   LSLSDPFL+++ QE CC  CN F+C+  TLLPE
Sbjct:    9 VILVTRTFARAPKCTSTIGLNAFLSTSFLVNADLIRFGVPSEVVTKYYDRAVMDVARFCNCSSVSVDETCVQLIFEESLELSLLKGALDADSLLSKGQRDQVSPTAPENKVKLFPLYDPGKTLSGLSSTQTEELNSHLTRLLSASKSVVSIQSEYWQRSRFPSDETFFQDTYESQKAACGEYQVASKMDNRTFPAWAATAYVIGLVQEVRKAQGEVSAAIDILAAHASFVFNGARCYRVNGLKLHIPVRKMEEYLATAQKLLNEAGQRSHPIPLNDIRKVSESSATFFPRLVTKLSSLSSNGDGRTVLVT-----DGTTIERALVNTLLMGD------PLLLGEITLGPAAYE-------CPERWIRVSRVLPLANMDEQCCPEKCEYAALSLSDPFLYTVTQEKCCELCNYFICKDHTLLPE 413          
BLAST of Ggra8913.t1 vs. uniprot
Match: A0A2V3J4E3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4E3_9FLOR)

HSP 1 Score: 266 bits (680), Expect = 4.820e-82
Identity = 150/335 (44.78%), Postives = 202/335 (60.30%), Query Frame = 0
Query:   25 PLCNTQLQLSLFLDESYSANANLIRFGVPSEAVGVFYNDALRYLAQHCKCGSTLLDETCVDTKFNSDKEVSSLRAVVDSDEGIANASKLFRLYDSQKTLYDLTKTQEESFKLGLELVNLNTHDLDIILSLGWQGVQFPSDDSFFQDDSLAQKTACSSYSPVTLRDEFKYPASAATAYVLSLVQNVRRAGGNLTIAYELLANHTSLVFNGVRCQKLSGDKLKIPIEYMRDYKNQAQKLLDESKGETSSVDLNDVRGVSSDAKLYLHPLVQKFSSLISYGDSETVLYTRSGLLGGELVERISVDTVLQNDLSLIASSSLLGSIVSGISATTQNAHRG 359
            P CN  + LS FL++SY ANANLIRFG PSE V   Y+ +L  +A  C+C +T +D+ CV T FN D EVS LR+ +D+D       KLFRLYDS K L  L   Q  S +     +   T D   I S  WQ   FPSDD FFQDD+  QK AC++++ VT      YPAS+ATAYV+ LVQ+VR+A  ++ +  ++LANHT+ V+NGVRC KLSGD+L IP+ Y+ DYK   + +L  S   T +  L +VR +  ++K++L  LV K S+LISYGDS TVL   + +     V R  V+  L  D SL+ +S + G    G+  T  N+  G
Sbjct:   24 PSCNNVISLSTFLNDSYQANANLIRFGAPSEIVRALYDHSLIEMASSCECSTTTVDQFCVHTIFNLDNEVSVLRSTIDTDATTVGTDKLFRLYDSSKVLDSLAANQIASLEFCRTHLLSLTPDTTTIKSPAWQRSIFPSDDVFFQDDASGQKDACNTFNAVTHPQGLTYPASSATAYVIGLVQSVRKAKLDMAVPLQILANHTTFVYNGVRCNKLSGDRLHIPVTYLEDYKKTIESIL--SSASTDTGILRNVRELLQNSKMFLPSLVDKLSALISYGDSATVLVANAIVGNPSTVTRDLVELTLAADPSLLVTS-MPGMSSIGMGQTQMNSPGG 355          
The following BLAST results are available for this feature:
BLAST of Ggra8913.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J7S93.740e-9441.61Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J4E34.820e-8244.78Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..441
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:790264..791589 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8913.t1Ggra8913.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 790264..791589 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8913.t1 ID=Ggra8913.t1|Name=Ggra8913.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=442bp
MDMRRGMLFAVHCVLFLSRLANAQPLCNTQLQLSLFLDESYSANANLIRF
GVPSEAVGVFYNDALRYLAQHCKCGSTLLDETCVDTKFNSDKEVSSLRAV
VDSDEGIANASKLFRLYDSQKTLYDLTKTQEESFKLGLELVNLNTHDLDI
ILSLGWQGVQFPSDDSFFQDDSLAQKTACSSYSPVTLRDEFKYPASAATA
YVLSLVQNVRRAGGNLTIAYELLANHTSLVFNGVRCQKLSGDKLKIPIEY
MRDYKNQAQKLLDESKGETSSVDLNDVRGVSSDAKLYLHPLVQKFSSLIS
YGDSETVLYTRSGLLGGELVERISVDTVLQNDLSLIASSSLLGSIVSGIS
ATTQNAHRGTCSAGWIFVSRAVSLMSADEECCSDKCELLGLSLSDPFLWS
IEQEDCCANCNLFVCQHQTLLPESIPLNLAPPTSYPTSVDL*
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