Ggra8902.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra8902.t1 vs. uniprot
Match: A0A2V3J4K9 (DNA-directed RNA polymerases I, II, and III subunit rpabc1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4K9_9FLOR) HSP 1 Score: 346 bits (887), Expect = 8.950e-120 Identity = 176/195 (90.26%), Postives = 186/195 (95.38%), Query Frame = 0
Query: 1 MLSDRGYAVLNTSEDMNLSKDDFAAQMQTRNYNRESLTMLRQRRDNPADQIFVFFPDEERGKSVGVDVVSAITKRMETNGVNNALMVLQSGLTPTAKGAVEKMSASGRCLLEVFMENELLVNITHHQLVPKHELMSEDSKRALLRRYKLKESQLPRIQRSDPIARYYGLVPGNVVKITRPSETAGRYVTYRLCVA 195
MLSDRGYAVLNT+ED+NLSK+DF A MQT N+NRESLTMLRQRRDNPADQIFVFFPDE RGKSVGVDVVSA+TKRME+NGVNN +MVLQ+GLTPTAKGAVEKMSASGRCLLEVFMENELLVNIT HQLVP HEL+SE SK ALLRRYKLKESQLPRIQRSDPIARYYGLVPGNVVKITRPSETAGRYVTYRLCV+
Sbjct: 1 MLSDRGYAVLNTTEDLNLSKEDFQAAMQTANFNRESLTMLRQRRDNPADQIFVFFPDEMRGKSVGVDVVSALTKRMESNGVNNGIMVLQTGLTPTAKGAVEKMSASGRCLLEVFMENELLVNITRHQLVPIHELLSEPSKHALLRRYKLKESQLPRIQRSDPIARYYGLVPGNVVKITRPSETAGRYVTYRLCVS 195
BLAST of Ggra8902.t1 vs. uniprot
Match: R7QDZ3 (RNA polymerase I, II, III common subunit n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDZ3_CHOCR) HSP 1 Score: 246 bits (629), Expect = 3.630e-80 Identity = 123/194 (63.40%), Postives = 159/194 (81.96%), Query Frame = 0
Query: 1 MLSDRGYAVLNTSEDMNLSKDDFAAQMQTRNYNRESLTMLRQRRDNPADQIFVFFPDEERGKSVGVDVVSAITKRMETNGVNNALMVLQSGLTPTAKGAVEKMSASGRCLLEVFMENELLVNITHHQLVPKHELMSEDSKRALLRRYKLKESQLPRIQRSDPIARYYGLVPGNVVKITRPSETAGRYVTYRLCV 194
MLSDRGYAVLN+ ED+ ++ FA + T+NYNRESLT+LRQ++D+ DQI+VFFP+E + K +GV + KRME +GV +A++VL++GLTP AK V ++++ + +E+F+ENEL+VNIT H LVPKH+++S D K+ALLRRYKLKESQLPRIQ++DPIARYYGL GNVVKITRPSETAGRYVTYRLCV
Sbjct: 23 MLSDRGYAVLNSEEDLLQPREVFAREFITQNYNRESLTLLRQKKDDDKDQIYVFFPEEIKNKPLGVKPLLERGKRMERDGVRHAIIVLETGLTPYAKKTVAELNSGDQARMEIFIENELIVNITKHILVPKHDVLSADEKKALLRRYKLKESQLPRIQKTDPIARYYGLTHGNVVKITRPSETAGRYVTYRLCV 216
BLAST of Ggra8902.t1 vs. uniprot
Match: A0A7S1ESI1 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ESI1_9RHOD) HSP 1 Score: 213 bits (542), Expect = 4.580e-67 Identity = 110/194 (56.70%), Postives = 146/194 (75.26%), Query Frame = 0
Query: 1 MLSDRGYAVLNTSEDMNLSKDDFAAQMQTRNYNRESLTMLRQRRDNPADQIFVFFPDEERGKSVGVDVVSAITKRMETNGVNNALMVLQSGLTPTAKGAVEKMSASGRCLLEVFMENELLVNITHHQLVPKHELMSEDSKRALLRRYKLKESQLPRIQRSDPIARYYGLVPGNVVKITRPSETAGRYVTYRLCV 194
+L DRGY VL+T D+ +S + F + + E+LT+L+ +RDNP+DQI+VFFP + + +GV + +RM+ +G+++A++VL SG+TP+AK AV +S+ R LE+F++NELLVNIT H LVPKHEL+S KRALL+ YKLKESQLPRIQ DP+ARYYGL PG VV+ITRPSETAGRYVTYRL V
Sbjct: 21 LLRDRGYLVLDTDTDLGMSAEQFRERYAQSKFAAEALTILKSKRDNPSDQIYVFFPQDPK---LGVKPIREYCERMQRDGIHHAIIVLLSGMTPSAKEAVHIVSSQHR--LELFLQNELLVNITEHVLVPKHELLSPAEKRALLKMYKLKESQLPRIQMKDPVARYYGLTPGQVVRITRPSETAGRYVTYRLVV 209
BLAST of Ggra8902.t1 vs. uniprot
Match: A0A6T6JZI1 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6JZI1_9RHOD) HSP 1 Score: 210 bits (534), Expect = 8.250e-66 Identity = 108/194 (55.67%), Postives = 143/194 (73.71%), Query Frame = 0
Query: 1 MLSDRGYAVLNTSEDMNLSKDDFAAQMQTRNYNRESLTMLRQRRDNPADQIFVFFPDEERGKSVGVDVVSAITKRMETNGVNNALMVLQSGLTPTAKGAVEKMSASGRCLLEVFMENELLVNITHHQLVPKHELMSEDSKRALLRRYKLKESQLPRIQRSDPIARYYGLVPGNVVKITRPSETAGRYVTYRLCV 194
ML DRGY V+ S+D+ + ++F+ + + RESLT+L+Q+RD+PADQI+VFF G V V + RME +GV+ A+M++ GLTP+A A+ K+ R +E F+ENELLVNIT H LVPKHE++S K+ALL+RYKLKESQLPR+Q+ DP++RYYGL PG+VV+ITRPSETAGRYVTYRL V
Sbjct: 24 MLVDRGYIVV--SDDLKTTLEEFSQRFHDAGFARESLTLLKQKRDDPADQIYVFFSQGTEGPKVSVKSLKDTIARMERDGVHRAIMIMSEGLTPSASDAISKLD---RYRIEPFLENELLVNITRHVLVPKHEMLSTAEKKALLKRYKLKESQLPRVQQRDPVSRYYGLSPGDVVRITRPSETAGRYVTYRLVV 212
BLAST of Ggra8902.t1 vs. uniprot
Match: M2XGL8 (DNA-directed RNA polymerase II subunit E n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XGL8_GALSU) HSP 1 Score: 206 bits (523), Expect = 3.850e-64 Identity = 107/194 (55.15%), Postives = 145/194 (74.74%), Query Frame = 0
Query: 1 MLSDRGYAVLNTSEDMNLSKDDFAAQMQTRNYNRESLTMLRQRRDNPADQIFVFFPDEERGKSVGVDVVSAITKRMETNGVNNALMVLQSGLTPTAKGAVEKMSASGRCLLEVFMENELLVNITHHQLVPKHELMSEDSKRALLRRYKLKESQLPRIQRSDPIARYYGLVPGNVVKITRPSETAGRYVTYRLCV 194
ML DRGY VL TS D+ +++++F +++Q NY+RESLT+L+Q + +P+DQI+VFFP EER V V + RM+ V A++V+ L+P AK ++K+++ + +EVF+E ELLVNITHH+LVPKHE++S + K+ LL+RY LKESQLPRI +DP+ARY GL G VVKITRPSETAGRYVTYRL V
Sbjct: 24 MLRDRGYVVLETSSDLEMTREEFGSRLQQANYSRESLTLLKQHQHDPSDQIYVFFPAEER---VSVKTLRDYFVRMDQERVYKAILVVIKSLSPFAKQGIQKVASQFK--VEVFLEMELLVNITHHELVPKHEVLSTEGKKQLLKRYHLKESQLPRILMTDPVARYLGLQKGQVVKITRPSETAGRYVTYRLVV 212
BLAST of Ggra8902.t1 vs. uniprot
Match: A0A7J7IF98 (Dna-directed RNA n=2 Tax=Cyanidiaceae TaxID=265316 RepID=A0A7J7IF98_9RHOD) HSP 1 Score: 196 bits (499), Expect = 1.620e-60 Identity = 108/194 (55.67%), Postives = 139/194 (71.65%), Query Frame = 0
Query: 1 MLSDRGYAVLNTSEDMNLSKDDFAAQMQTRNYNRESLTMLRQRRDNPADQIFVFFPDEERGKSVGVDVVSAITKRMETNGVNNALMVLQSGLTPTAKGAVEKMSASGRCLLEVFMENELLVNITHHQLVPKHELMSEDSKRALLRRYKLKESQLPRIQRSDPIARYYGLVPGNVVKITRPSETAGRYVTYRLCV 194
ML DRGY VL T D+ L ++FA + RESLTMLRQ R + ++QI+VFFP EE+ VGV + R+ET V A++V+Q+GLTP AK AV ++ R LE+F E ELLVNIT HQLVP+HE+++ + K+ LLRRY+LKE+QLPRI +SDP+ARY+G+ G V+KITR SETAGRYVTYRL V
Sbjct: 23 MLRDRGYLVLPTKTDLELPLEEFAHKFDAAGRARESLTMLRQHRVDRSNQIYVFFPKEEK---VGVKPIREYCMRLETENVLRAIIVVQTGLTPIAKQAVAELQP--RFHLELFQEAELLVNITKHQLVPRHEVLTAEQKKTLLRRYQLKETQLPRILQSDPVARYFGVTRGQVIKITRSSETAGRYVTYRLVV 211
BLAST of Ggra8902.t1 vs. uniprot
Match: A0A1X6NM67 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NM67_PORUM) HSP 1 Score: 190 bits (483), Expect = 4.320e-58 Identity = 102/195 (52.31%), Postives = 135/195 (69.23%), Query Frame = 0
Query: 1 MLSDRGYAVLNTS-EDMNLSKDDFAAQMQTRNYNRESLTMLRQRRDNPADQIFVFFPDEERGKSVGVDVVSAITKRMETNGVNNALMVLQSGLTPTAKGAVEKMSASGRCLLEVFMENELLVNITHHQLVPKHELMSEDSKRALLRRYKLKESQLPRIQRSDPIARYYGLVPGNVVKITRPSETAGRYVTYRLCV 194
ML DRGY + +TS +D+ ++ +F Y+R+SLTM +Q R N +QI+VFFP R +G V +R+ GV A++VLQ +TP+A AV +M + R LE+F+ENELL+NIT H LVP+HE++S+ K ALL RYKLK+SQLPR+Q+ D +ARYYGL G V+KITRPSETAGRY TYRLCV
Sbjct: 21 MLRDRGYVISDTSADDLGMTAAEFENNFTASGYSRDSLTMFKQLRANAGEQIYVFFP---RDVKLGKAAVDEYKRRLTNEGVARAIIVLQGPMTPSANKAVGEMEPAVR--LELFLENELLINITKHVLVPQHEVLSDTEKAALLARYKLKDSQLPRVQKKDAVARYYGLTAGQVMKITRPSETAGRYCTYRLCV 210
BLAST of Ggra8902.t1 vs. uniprot
Match: A0A5J4YSN5 (DNA-directed RNA polymerases II and IV subunit 5A n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YSN5_PORPP) HSP 1 Score: 188 bits (478), Expect = 2.320e-57 Identity = 98/194 (50.52%), Postives = 137/194 (70.62%), Query Frame = 0
Query: 1 MLSDRGYAVLNTSEDMNLSKDDFAAQMQTRNYNRESLTMLRQRRDNPADQIFVFFPDEERGKSVGVDVVSAITKRMETNGVNNALMVLQSGLTPTAKGAVEKMSASGRCLLEVFMENELLVNITHHQLVPKHELMSEDSKRALLRRYKLKESQLPRIQRSDPIARYYGLVPGNVVKITRPSETAGRYVTYRLCV 194
ML DRGY VL+ +D+ + F + N+ ++L +++ +R + ++ VFFP +++ VGV +V + +R+E +++ ++VL + LTP+AK AV MS+ R LE+F +NELLVNIT H LVPKHE++++D KRALL YKLKESQLPRIQ DP+ARYYG+ G VVK+TRPSETAGRYVTYRL V
Sbjct: 21 MLRDRGYLVLDNEDDLGMPYQTFYNNFRESNFQDQALEIIKWKRSDVNAKVHVFFPQDQK---VGVKLVREVCERLELESIHHGIIVLLNSLTPSAKDAVSIMSSQYR--LELFAQNELLVNITQHVLVPKHEVLTDDQKRALLEMYKLKESQLPRIQTRDPVARYYGMTVGQVVKVTRPSETAGRYVTYRLVV 209
BLAST of Ggra8902.t1 vs. uniprot
Match: A0A7S3UFC4 (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UFC4_9CHLO) HSP 1 Score: 187 bits (475), Expect = 6.820e-57 Identity = 102/198 (51.52%), Postives = 142/198 (71.72%), Query Frame = 0
Query: 1 MLSDRGYAVLNTSEDMNLSKDDFAAQMQTRNYN----RESLTMLRQRRDNPADQIFVFFPDEERGKSVGVDVVSAITKRMETNGVNNALMVLQSGLTPTAKGAVEKMSASGRCLLEVFMENELLVNITHHQLVPKHELMSEDSKRALLRRYKLKESQLPRIQRSDPIARYYGLVPGNVVKITRPSETAGRYVTYRLCV 194
ML+DRGY V ++++++++DF Q + E LT+L R+D ++Q+FVFFP+E + VGV + +RM++ V A++V +S LTP AK +++M + ++E+F+E+ELLVNIT H LVPKH+L+SE+ KRALL RYK+KESQLPRIQ SDP+ARYYGL G VV+I RPSETAGRYVTYRLC+
Sbjct: 21 MLNDRGYLV--PQKELDMTREDFV-QPPPEGFGLAPRSEDLTILVPRKDGSSEQMFVFFPEEVK---VGVKTIKTYAERMKSENVGRAILVAKSALTPFAKQCLQEMQP--KYIVELFLESELLVNITQHTLVPKHQLLSEEDKRALLSRYKVKESQLPRIQISDPVARYYGLQRGQVVRIVRPSETAGRYVTYRLCI 210
BLAST of Ggra8902.t1 vs. uniprot
Match: A0A7J6M2T1 (DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=3 Tax=Perkinsus TaxID=28000 RepID=A0A7J6M2T1_PEROL) HSP 1 Score: 184 bits (468), Expect = 8.590e-56 Identity = 102/197 (51.78%), Postives = 139/197 (70.56%), Query Frame = 0
Query: 1 MLSDRGYAVLNTSEDMNLSKDDFAAQ---MQTRNYNRESLTMLRQRRDNPADQIFVFFPDEERGKSVGVDVVSAITKRMETNGVNNALMVLQSGLTPTAKGAVEKMSASGRCLLEVFMENELLVNITHHQLVPKHELMSEDSKRALLRRYKLKESQLPRIQRSDPIARYYGLVPGNVVKITRPSETAGRYVTYRLCV 194
+L DRGY V + +N +K+ FA Q +Q R R L +L ++D+P+DQ+ VFFPDE K VGV + + +ME ++ A++V+Q LT AK A+++ AS + +EVF E+EL+VNITHH+LVP+H+ ++ + KR LL RYK+KE+QLPRIQ SDP+ARYYGL G V+KI RPSETAGRYVTYRLCV
Sbjct: 23 LLQDRGYVV--AQKYLNETKESFAQQWNEIQERKGGRHDLIILVSKQDDPSDQLIVFFPDEN--KRVGVKPIRTLALKMEEQRLSRAILVVQQPLTAFAKTAIQE--ASPQMEIEVFNESELVVNITHHELVPEHKPLTAEEKRLLLERYKVKENQLPRIQSSDPVARYYGLKKGQVMKIIRPSETAGRYVTYRLCV 213 The following BLAST results are available for this feature:
BLAST of Ggra8902.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra8902.t1 ID=Ggra8902.t1|Name=Ggra8902.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=196bpback to top |