Ggra8897.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8897.t1
Unique NameGgra8897.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length273
Homology
BLAST of Ggra8897.t1 vs. uniprot
Match: A0A2V3J4C6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4C6_9FLOR)

HSP 1 Score: 321 bits (823), Expect = 1.560e-107
Identity = 193/274 (70.44%), Postives = 216/274 (78.83%), Query Frame = 0
Query:    1 MAFVITPNSLLRTTAFKGDVIS----QRPVTQTARVRMAVKEDPDSLWTSVGKSDFKENVFTGGMPGGEAFYKAWVEDGMTKDFPDVPTKFQPKADYKPKKEVKTGLIADLDKTEFFEGFTMPTE--EEDKEGGEEKVEETDTEPSVSTTTGSDLPSPALYEQYFPADRLNKAPEIKIVYENDYLLDRVSLAMTEVTASATDLXXXXXXXXXXXXXXXXXXGNLATASVSVSFEYIEGLPTLPAPPKAEGDTITSLVPGPGGGLKLEFEAAGQG 268
            MAFV+TPNS +  TAF+GD +S    QRP T+TARVRMAVKED DSLWTSVGK+ FKENVFTGGMPGGEAFY+AW+EDGM KD PDVP+ FQPKA +KPK+EVKTG++ADLDKTEFFEGF MP E  EE    GEEK  ET  E +   +     P+PALYE+YFP    NKAPEIKIVYENDYL DRVS+AMTEVTAS +D+XXXXXXXXXXXXXXXXXX            E+IEGLPTLP PPKAEGDTITSLVPG GGGLKL+F+ AG G
Sbjct:    1 MAFVLTPNSTIGVTAFRGDHVSHKSNQRPRTRTARVRMAVKEDSDSLWTSVGKTKFKENVFTGGMPGGEAFYRAWIEDGMEKDVPDVPSGFQPKAAFKPKEEVKTGILADLDKTEFFEGFNMPAESDEEKPASGEEKEGETVPEQAADDSG----PNPALYEKYFPDSVRNKAPEIKIVYENDYLKDRVSVAMTEVTASFSDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHIEGLPTLPPPPKAEGDTITSLVPGAGGGLKLQFDVAGAG 270          
BLAST of Ggra8897.t1 vs. uniprot
Match: A0A1X6NKW0 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NKW0_PORUM)

HSP 1 Score: 102 bits (254), Expect = 1.400e-21
Identity = 90/296 (30.41%), Postives = 121/296 (40.88%), Query Frame = 0
Query:    2 AFVITPNSLLRTTAFKGDVISQRPVTQTARVRMAVKEDPDSLWTSVGKSDFKENVFTGGMPGGEAFYKAWVEDGMTKDFPDVPTKFQPKADYKPKKEVKTGLIADLDKTEFFEGFTMPTEEEDKEG--GEEKVEETDTEPSVSTTTGS-----------------------------DLPSPALYEQYFPADRLNKAPEIKIVYENDYLLDRVSLAMTEVTASATDLXXXXXXXXXXXXXXXXXXGNLATASVSVSFEYIEGLPTLPAPPKAEGDTITSLVPGPGGGLKLEFEAAG 266
            AFV    S+    A +    + RP+T +          P     S+         + GG PGGE F+K WV+DGMT + PD+P + Q K  ++    V        D     EG     +  +  G  G+      D   + + T G                              D P+PALYEQ++PAD+   AP I I   ND    RV L+M  V A   +                   G+L TASVS+  E +EGLP +   PK  GD  TSLVP  GGGLKL+F  +G
Sbjct:    3 AFVAGAVSVPTQGARRAGEFAGRPLTVSVAPATPCAGRPSVTGISMKGQTLGFGKWKGGFPGGEDFFKKWVDDGMTGEVPDLPEELQSKTPFQEPDAVIDPREWYADMVPVPEGLISQPKVSEMIGKAGDAVANAVDDLAAATGTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGPNPALYEQFYPADKRYLAPHIAISEAND----RVGLSMNAVEAGFYERYFPKERLNKAPVIDIFYSGSLNTASVSLKMEEVEGLPAVAVVPK--GDVQTSLVPSSGGGLKLDFSISG 292          
BLAST of Ggra8897.t1 vs. uniprot
Match: A0A5J4YX67 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YX67_PORPP)

HSP 1 Score: 93.2 bits (230), Expect = 2.030e-18
Identity = 90/299 (30.10%), Postives = 128/299 (42.81%), Query Frame = 0
Query:   23 QRPVTQTARVRMAVKEDPDSLWTSVGKSDFKENVFTGGMPGGEAFYKAWVEDGMTKDFPDVPTKFQPKADYKPKKEVKTGLIAD------LDKT------------EFF------EGFT--MPTEEEDKEGGEEKVEETDTEPSVST-----------------------TTGSDLPSPALYEQYFPADRLNKAPEIKIVYENDYLLDRVSLAMTEVTASATD-LXXXXXXXXXXXXXXXXXXGNLATASVSVSFEYIEGLPTLPAP-PKAEGDTITSLVPGPGGG-LKLEFEAAGQGV 269
            +R   + +R ++ +K+D    W         +  F GG PGGEAFYK W+E+G   D P +  + QP++  K     +  +I++      +D T            EFF      EG    +P  + D + G    ++T  +                            T   + P P LY +YF ADRL+KAPEI   Y N    DRV +  TEVT+ A++                    G ++TASVS+S   I G P LP P PK  GD  T++V  P  G LKLEF+  G  V
Sbjct:   23 RRAAARRSRAQLRMKQDDYEQW---------KTEFAGGFPGGEAFYKKWIEEGAKGDVPALEEELQPRSPNKKPTIYEEQMISNRGQQKGVDPTWKTLLAGGFPGGEFFFKKWIGEGAQGEVPNLDADLQPGSGSAKKTGKKEDADKSSPGGIMTPGRIMVPSGLGEEEETVDKEAPRPELYNKYFSADRLHKAPEILFEY-NKTKYDRVGVRYTEVTSKASERFFPKSRMNRAPVIEISYREGAVSTASVSLSMPEISGPPALPFPVPK--GDVTTTMVTDPTTGRLKLEFKVDGAAV 309          
BLAST of Ggra8897.t1 vs. uniprot
Match: A0A7S1TJB6 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TJB6_9RHOD)

HSP 1 Score: 57.8 bits (138), Expect = 9.900e-7
Identity = 25/46 (54.35%), Postives = 34/46 (73.91%), Query Frame = 0
Query:   47 VGKSDFKENVFTGGMPGGEAFYKAWVEDGMTKDFPDVPTKFQPKAD 92
            +GK+ +KE+ FTGG PGGE F++ WV+DGMT   PD+  + QP AD
Sbjct:   32 MGKTMWKESWFTGGFPGGEGFFRQWVDDGMTGAVPDLEPERQPSAD 77          
The following BLAST results are available for this feature:
BLAST of Ggra8897.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J4C61.560e-10770.44Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6NKW01.400e-2130.41Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4YX672.030e-1830.10Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S1TJB69.900e-754.35Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:681054..681872 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8897.t1Ggra8897.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 681054..681872 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8897.t1 ID=Ggra8897.t1|Name=Ggra8897.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=273bp
MAFVITPNSLLRTTAFKGDVISQRPVTQTARVRMAVKEDPDSLWTSVGKS
DFKENVFTGGMPGGEAFYKAWVEDGMTKDFPDVPTKFQPKADYKPKKEVK
TGLIADLDKTEFFEGFTMPTEEEDKEGGEEKVEETDTEPSVSTTTGSDLP
SPALYEQYFPADRLNKAPEIKIVYENDYLLDRVSLAMTEVTASATDLYYP
KEMKDKAPIIDISYNGNLATASVSVSFEYIEGLPTLPAPPKAEGDTITSL
VPGPGGGLKLEFEAAGQGVVGV*
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