Ggra8895.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8895.t1
Unique NameGgra8895.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length159
Homology
BLAST of Ggra8895.t1 vs. uniprot
Match: A0A2V3J4R9 (Iron-sulfur cluster assembly protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4R9_9FLOR)

HSP 1 Score: 236 bits (602), Expect = 1.430e-77
Identity = 118/150 (78.67%), Postives = 132/150 (88.00%), Query Frame = 0
Query:    1 MIRTTASTLQRTQAYALNALANRTRCYHDKVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIRVNEDGEIVESAFKTFGCGSAIASSSLATEWVKGRNVDDAKKIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKQKRD 150
            M R  A+++ R +    + +  + R Y DKVIDHYENPRNVGSL+K DKNVGTGLVGAPACGDVMKLQIRV+E+GEI+ESAFKTFGCGSAIASSSLATEWVKGRNV+DA KIKNSDIAKELKLPPVKLHCSMLAEDAIKAA+KDLK K+D
Sbjct:    1 MNRIAAASISRARGPFRSTIGRQIRKYDDKVIDHYENPRNVGSLNKNDKNVGTGLVGAPACGDVMKLQIRVDENGEIIESAFKTFGCGSAIASSSLATEWVKGRNVNDATKIKNSDIAKELKLPPVKLHCSMLAEDAIKAAVKDLKTKQD 150          
BLAST of Ggra8895.t1 vs. uniprot
Match: R7Q413 (Iron-sulfur cluster assembly protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q413_CHOCR)

HSP 1 Score: 235 bits (600), Expect = 2.880e-77
Identity = 115/129 (89.15%), Postives = 121/129 (93.80%), Query Frame = 0
Query:   21 ANRTRCYHDKVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIRVNEDGEIVESAFKTFGCGSAIASSSLATEWVKGRNVDDAKKIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKQKR 149
            A+  R YHDKVIDHYENPRNVGS+DK DKNVGTGLVGAPACGDVMKLQIRVN DGEIVE+AFKTFGCGSAIASSSLATEWVKG NVDDA+KIKNSDIAKEL LPPVKLHCSMLAEDAIKAAI +LK+KR
Sbjct:   21 ASAARAYHDKVIDHYENPRNVGSMDKNDKNVGTGLVGAPACGDVMKLQIRVNNDGEIVETAFKTFGCGSAIASSSLATEWVKGMNVDDARKIKNSDIAKELSLPPVKLHCSMLAEDAIKAAIANLKEKR 149          
BLAST of Ggra8895.t1 vs. uniprot
Match: A0A444SHN8 (Epidermal growth factor receptor n=2 Tax=Armadillidium vulgare TaxID=13347 RepID=A0A444SHN8_ARMVU)

HSP 1 Score: 218 bits (554), Expect = 3.330e-70
Identity = 105/132 (79.55%), Postives = 118/132 (89.39%), Query Frame = 0
Query:   25 RCYHDKVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIRVNEDGEIVESAFKTFGCGSAIASSSLATEWVKGRNVDDAKKIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKQKRDGQDSAP 156
            R YH+KVIDHYENPRNVGSLDKKD +VGTGLVGAPACGDVMKLQI+V+E+G+IV++ FKTFGCGSAIASSSLATEW+KG+ VDDA KI N DIAKEL LPPVKLHCSMLAEDAIKAA+ D K K+  +D AP
Sbjct:   29 RNYHEKVIDHYENPRNVGSLDKKDTSVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWIKGKKVDDALKITNKDIAKELSLPPVKLHCSMLAEDAIKAALSDYKIKQSSKDKAP 160          
BLAST of Ggra8895.t1 vs. uniprot
Match: A0A6S7FGP8 (Iron-sulfur cluster assembly scaffold n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7FGP8_PARCT)

HSP 1 Score: 218 bits (554), Expect = 3.440e-70
Identity = 104/125 (83.20%), Postives = 116/125 (92.80%), Query Frame = 0
Query:   27 YHDKVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIRVNEDGEIVESAFKTFGCGSAIASSSLATEWVKGRNVDDAKKIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKQKRDG 151
            YH KVIDHYENPRNVGS+DK D NVGTGLVGAPACGDVMKLQI+V++DG+IV++ FKTFGCGSAIASSSLATEWVKG+NVDDA KIKN+DIAKEL LPPVKLHCSMLAEDAIKAA+ D K K++G
Sbjct:   28 YHAKVIDHYENPRNVGSMDKDDDNVGTGLVGAPACGDVMKLQIKVSDDGKIVDAKFKTFGCGSAIASSSLATEWVKGKNVDDALKIKNTDIAKELSLPPVKLHCSMLAEDAIKAALNDYKVKKEG 152          
BLAST of Ggra8895.t1 vs. uniprot
Match: L7M1F1 (Putative iron binding protein involved in fe-s cluster formation n=8 Tax=Ixodidae TaxID=6939 RepID=L7M1F1_RHIPC)

HSP 1 Score: 218 bits (554), Expect = 4.190e-70
Identity = 110/154 (71.43%), Postives = 129/154 (83.77%), Query Frame = 0
Query:    8 TLQRTQAYALNALAN---RTRCYHDKVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIRVNEDGEIVESAFKTFGCGSAIASSSLATEWVKGRNVDDAKKIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKQKRDGQDSAPPS 158
            TL R+ + A   LA     +  YH+KVIDHYENPRNVGSL+K DKNVGTGLVGAPACGDVMKLQI+V+E G+IV++ FKTFGCGSAIASSSLATEW+KG+NV++A KIKN+DIAKEL LPPVKLHCSMLAEDAIKAA+ D K+KR  Q++   S
Sbjct:    5 TLHRSLSPARKTLAIVPVTSASYHEKVIDHYENPRNVGSLNKDDKNVGTGLVGAPACGDVMKLQIKVDESGKIVDAKFKTFGCGSAIASSSLATEWIKGKNVNEAMKIKNTDIAKELSLPPVKLHCSMLAEDAIKAALSDYKRKRGDQEAPKTS 158          
BLAST of Ggra8895.t1 vs. uniprot
Match: A0A7S3BYI5 (Iron-sulfur cluster assembly protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BYI5_9VIRI)

HSP 1 Score: 218 bits (555), Expect = 1.330e-69
Identity = 102/129 (79.07%), Postives = 118/129 (91.47%), Query Frame = 0
Query:   21 ANRTRCYHDKVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIRVNEDGEIVESAFKTFGCGSAIASSSLATEWVKGRNVDDAKKIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKQKR 149
            A   R YH KV+DHYENPRNVGS D++D NVGTGLVGAPACGDVMKLQI+V++DGEIV+S FKTFGCGSAIASSS+ATEW+KG++V++A  +KNSDIAKELKLPPVKLHCSMLAEDAIKAAI D+KQK+
Sbjct:   75 ARAARAYHQKVVDHYENPRNVGSFDREDPNVGTGLVGAPACGDVMKLQIKVDDDGEIVDSCFKTFGCGSAIASSSVATEWIKGKSVEEASGVKNSDIAKELKLPPVKLHCSMLAEDAIKAAIADVKQKK 203          
BLAST of Ggra8895.t1 vs. uniprot
Match: A0A7M7PGF3 (NifU_N domain-containing protein n=3 Tax=Echinacea TaxID=7674 RepID=A0A7M7PGF3_STRPU)

HSP 1 Score: 216 bits (550), Expect = 1.440e-69
Identity = 101/129 (78.29%), Postives = 120/129 (93.02%), Query Frame = 0
Query:   27 YHDKVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIRVNEDGEIVESAFKTFGCGSAIASSSLATEWVKGRNVDDAKKIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKQKRDGQDSA 155
            YH  VIDHYENPRNVG++DK DKNVGTGLVGAPACGDVMKLQI+V++DG+IV++ FKTFGCGSAIASSSLATEW+KGR+VD+AK IKN+DIAKEL LPPVKLHCSMLAEDAIKAA++D + K+D +++A
Sbjct:   32 YHKNVIDHYENPRNVGAMDKNDKNVGTGLVGAPACGDVMKLQIKVDDDGKIVDAKFKTFGCGSAIASSSLATEWIKGRSVDEAKDIKNTDIAKELSLPPVKLHCSMLAEDAIKAALQDYRVKQDSKEAA 160          
BLAST of Ggra8895.t1 vs. uniprot
Match: H2LWE0 (Iron-sulfur cluster assembly scaffold protein IscU n=6 Tax=Oryzias TaxID=8089 RepID=H2LWE0_ORYLA)

HSP 1 Score: 216 bits (550), Expect = 1.590e-69
Identity = 105/131 (80.15%), Postives = 118/131 (90.08%), Query Frame = 0
Query:   26 CYHDKVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIRVNEDGEIVESAFKTFGCGSAIASSSLATEWVKGRNVDDAKKIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKQKR-DGQDSA 155
            CYH+KV+DHYENPRNVGSLDKK KNVGTGLVGAPACGDVMKLQI V+  G+IV++ FKTFGCGSAIASSSLATEWVKG++VD+A KIKN+DIAKEL LPPVKLHCSMLAEDAIKAA+ D + K+ DGQ  A
Sbjct:   30 CYHEKVVDHYENPRNVGSLDKKSKNVGTGLVGAPACGDVMKLQIEVDSQGKIVDAKFKTFGCGSAIASSSLATEWVKGKSVDEALKIKNTDIAKELSLPPVKLHCSMLAEDAIKAALADYRLKQSDGQQEA 160          
BLAST of Ggra8895.t1 vs. uniprot
Match: A0A2L2Y2C8 (Iron-sulfur cluster assembly enzyme ISCU, mitochondrial (Fragment) n=2 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2Y2C8_PARTP)

HSP 1 Score: 215 bits (548), Expect = 1.660e-69
Identity = 107/146 (73.29%), Postives = 126/146 (86.30%), Query Frame = 0
Query:    9 LQRTQAYALNALANRTRCYHDKVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIRVNEDGEIVESAFKTFGCGSAIASSSLATEWVKGRNVDDAKKIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKQKRDGQDS 154
            + R  + AL + +  T  YH KV+DHYENPRNVGSLDK DK VGTGLVGAPACGDVMKLQI+V+E+G+I+++ FKTFGCG+AIASSSLATEWVKG+NV+DA  IKNSDIAKEL LPPVKLHCSMLAEDAIKAA+KD K K+D +D+
Sbjct:    2 ITRNHSPALYSASKAT--YHHKVVDHYENPRNVGSLDKDDKQVGTGLVGAPACGDVMKLQIKVDENGKIIDAKFKTFGCGAAIASSSLATEWVKGKNVNDALGIKNSDIAKELCLPPVKLHCSMLAEDAIKAALKDYKIKQDAKDT 145          
BLAST of Ggra8895.t1 vs. uniprot
Match: A0A5B8MHW8 (Iron-sulfur cluster assembly protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MHW8_9CHLO)

HSP 1 Score: 216 bits (549), Expect = 1.800e-69
Identity = 102/125 (81.60%), Postives = 113/125 (90.40%), Query Frame = 0
Query:   24 TRCYHDKVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIRVNEDGEIVESAFKTFGCGSAIASSSLATEWVKGRNVDDAKKIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKQK 148
            +R YH+KVIDHYENPRNVGS DK DKNVGTGLVGAPACGDVMKLQI+V++DG I++S FKTFGCGSAIASSSLATEWVKGR +DD  +IKN DIAK L LPPVKLHCSMLAEDAIKAA+KDL+ K
Sbjct:   31 SRLYHEKVIDHYENPRNVGSFDKNDKNVGTGLVGAPACGDVMKLQIKVDDDGNIIDSCFKTFGCGSAIASSSLATEWVKGRTLDDVVEIKNQDIAKHLSLPPVKLHCSMLAEDAIKAAVKDLRAK 155          
The following BLAST results are available for this feature:
BLAST of Ggra8895.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J4R91.430e-7778.67Iron-sulfur cluster assembly protein n=1 Tax=Graci... [more]
R7Q4132.880e-7789.15Iron-sulfur cluster assembly protein n=1 Tax=Chond... [more]
A0A444SHN83.330e-7079.55Epidermal growth factor receptor n=2 Tax=Armadilli... [more]
A0A6S7FGP83.440e-7083.20Iron-sulfur cluster assembly scaffold n=2 Tax=Para... [more]
L7M1F14.190e-7071.43Putative iron binding protein involved in fe-s clu... [more]
A0A7S3BYI51.330e-6979.07Iron-sulfur cluster assembly protein n=1 Tax=Prasi... [more]
A0A7M7PGF31.440e-6978.29NifU_N domain-containing protein n=3 Tax=Echinacea... [more]
H2LWE01.590e-6980.15Iron-sulfur cluster assembly scaffold protein IscU... [more]
A0A2L2Y2C81.660e-6973.29Iron-sulfur cluster assembly enzyme ISCU, mitochon... [more]
A0A5B8MHW81.800e-6981.60Iron-sulfur cluster assembly protein n=1 Tax=Chlor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011339ISC system FeS cluster assembly, IscU scaffoldTIGRFAMTIGR01999TIGR01999coord: 27..149
e-value: 1.2E-67
score: 223.6
NoneNo IPR availableGENE3D3.90.1010.10coord: 26..155
e-value: 5.2E-51
score: 174.1
NoneNo IPR availablePANTHERPTHR10093:SF16IRON-SULFUR CLUSTER ASSEMBLY ENZYME ISCU, MITOCHONDRIALcoord: 3..151
NoneNo IPR availableSUPERFAMILY82649SufE/NifUcoord: 26..149
IPR002871NIF system FeS cluster assembly, NifU, N-terminalPFAMPF01592NifU_Ncoord: 27..149
e-value: 3.2E-54
score: 182.5
IPR002871NIF system FeS cluster assembly, NifU, N-terminalPANTHERPTHR10093IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOGcoord: 3..151
IPR002871NIF system FeS cluster assembly, NifU, N-terminalCDDcd06664IscU_likecoord: 27..141
e-value: 1.07281E-47
score: 148.937

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:676307..676881 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8895.t1Ggra8895.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 676307..676881 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8895.t1 ID=Ggra8895.t1|Name=Ggra8895.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=159bp
MIRTTASTLQRTQAYALNALANRTRCYHDKVIDHYENPRNVGSLDKKDKN
VGTGLVGAPACGDVMKLQIRVNEDGEIVESAFKTFGCGSAIASSSLATEW
VKGRNVDDAKKIKNSDIAKELKLPPVKLHCSMLAEDAIKAAIKDLKQKRD
GQDSAPPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011339ISC_FeS_clus_asmbl_IscU
IPR002871NIF_FeS_clus_asmbl_NifU_N