Ggra8884.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8884.t1
Unique NameGgra8884.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length689
Homology
The following BLAST results are available for this feature:
BLAST of Ggra8884.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008974TRAF-likeGENE3D2.60.210.10Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain Acoord: 524..683
e-value: 4.4E-7
score: 31.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 304..323
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 298..335
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..62
NoneNo IPR availableSUPERFAMILY49599TRAF domain-likecoord: 545..607
IPR002083MATH/TRAF domainCDDcd00121MATHcoord: 545..590
e-value: 9.13203E-5
score: 40.8255

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:644508..646574 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8884.t1Ggra8884.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 644508..646574 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8884.t1 ID=Ggra8884.t1|Name=Ggra8884.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=689bp
MRDREQQGNEDQSSPLEQTPNSFAIASANMHTKPPRRTTNMKRSLNCTNS
LSDPSSKMRRVQEVSPSPFPSKGPGSSGNVGERVRNAIGEAQDKIAAGNP
RANDAGGYHNSSVSHILYREDRKHSSHNVFTQKWYDGLQESIAKKRFEVP
KNVLMPAYFAIEDHLHNSLFSSSGAESEEADLLYQVLAFVQNISNEFLHV
MGDTEKLDVKAPEKHMMHIWKKIRGVSEMLETRYDLLLFRRRGYKLQAKM
LESYCVPPVGDSILAKTVFREVRNVGHGEDAVVSAEYARTKATRISIPKP
LRVPSEKGNDKRNLPESSVRHEQLGDDPTGGSNVALHLQNTRGKQCKSSN
PGIINSAENVAVEVIGEECSVVHEEDFEKSRYRETQIPSHLLSLHGLARI
PGESKPILPLAMSRVLVEQMRKDERDGVVAVPPRPEWQSVQVVALSDEKE
QSKSNIAKPLPRLQMKTQESLPPKNHAVERGVEVVQRDEHVARPSPTTPR
ALPRVGFVPVQCVSTLLTHCNTIAFTYVIGEEQRRSDRHLVACPSWGGFK
WSLLVFPHGDQKKHTLAVFLKCLGRENGGYTADWKAGAKFGIGVAKRSSP
VYCCALDGGRDATVVNNACNKVLKMLACKDSRRMDEPYFGASQYLFRAKS
NNRGFPALAPTSELNTGMFCNEEGKMVLFGYISEVVSK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008974TRAF-like
IPR002083MATH/TRAF_dom