Ggra8878.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8878.t1
Unique NameGgra8878.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length162
Homology
BLAST of Ggra8878.t1 vs. uniprot
Match: A0A2V3J4M0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4M0_9FLOR)

HSP 1 Score: 143 bits (360), Expect = 1.420e-40
Identity = 78/159 (49.06%), Postives = 103/159 (64.78%), Query Frame = 0
Query:    1 MAWCN-APMRLQTGRTRPSFHRATCKLDDASRTPILHASAARKTLASISASILLSLLTINGCHAEIISQPLCEKGEGPGCEAAAQDNALIGELLQKSRNNRQKNDQAMLEKYWRQGYGDYFSFGFNKELIKDDDGQWRLVEPKGLSTAVKNRLEDLIRR 158
            +AWC  AP    +     SF    C L     T     + A   LA+ SASILLSL     C A II QP C KG+GPGCEA+A +NALI +LL++SR  R++ND  MLEKYW+QGYGDYFS+GFNK+L++D  G+W LV+P  + + V+ R+E L++R
Sbjct:   14 LAWCLVAPSATPSSA---SFAAPRCALTPP--TDARKRAVAAVALAA-SASILLSLGAAPQCEAAIIQQPPCYKGDGPGCEASASENALIHKLLEQSRAKREQNDNTMLEKYWKQGYGDYFSYGFNKQLVRDQHGKWSLVDPDDVPSRVQRRIEQLMKR 166          
BLAST of Ggra8878.t1 vs. uniprot
Match: A0A1X6NIX9 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NIX9_PORUM)

HSP 1 Score: 100 bits (250), Expect = 2.830e-24
Identity = 53/115 (46.09%), Postives = 65/115 (56.52%), Query Frame = 0
Query:   29 ASRTPILHASAARKTLASISASILLSLLTINGCHAEIISQPLCEKGEGPGCEAAAQDNALIGELLQKSRNNRQKNDQAMLEKYWRQGYGDYFSFGFNKELIKDD-DGQWRLVEPK 142
            A+R P      AR T A          L         ISQ  C  GEGPGC  AA+DN L+  L + SR N++ N+QAMLEKYWR+GY  YFSFG+N+ L KD+  G W LV P+
Sbjct:   14 AARRPATPVMTARPTWAXXXXXXXXXXLLTASPSLAAISQAPCVAGEGPGCADAAEDNPLVKRLQENSRKNKEANNQAMLEKYWREGYNSYFSFGYNQTLQKDEATGNWSLVSPE 128          
BLAST of Ggra8878.t1 vs. uniprot
Match: A0A6T6N814 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A6T6N814_9RHOD)

HSP 1 Score: 83.2 bits (204), Expect = 4.770e-17
Identity = 45/128 (35.16%), Postives = 71/128 (55.47%), Query Frame = 0
Query:   36 HASAARKTLASISASILLSLLTING---CHAE-IISQPLCEKGEGPGCEAAAQDNALIGELLQKSRNNRQKNDQAMLEKYWRQGYGDYFSFGFNKELIKDDDGQWRLVEPKGLSTAVKNRLEDLIRRN 159
            H+      LA +S  +   ++  N    C AE  I +P C  GEG GC+  ++ N LI +L Q+S+ N++K   A L+  W QGY DYFSFG++KEL+K + G+W L +P+          ++  ++N
Sbjct:   49 HSQQESLKLAGVSLLLSFGMMVSNAAPMCAAESAIVKPTCVMGEGLGCDELSEGNPLIMKLQQRSKENKEKT-LAELQDKWYQGYKDYFSFGYSKELVKTEGGKWELRDPENAVQKASRIFQEKTQKN 175          
The following BLAST results are available for this feature:
BLAST of Ggra8878.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J4M01.420e-4049.06Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6NIX92.830e-2446.09Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A6T6N8144.770e-1735.16Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:618859..619441 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8878.t1Ggra8878.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 618859..619441 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8878.t1 ID=Ggra8878.t1|Name=Ggra8878.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=162bp
MAWCNAPMRLQTGRTRPSFHRATCKLDDASRTPILHASAARKTLASISAS
ILLSLLTINGCHAEIISQPLCEKGEGPGCEAAAQDNALIGELLQKSRNNR
QKNDQAMLEKYWRQGYGDYFSFGFNKELIKDDDGQWRLVEPKGLSTAVKN
RLEDLIRRNNK*
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