Ggra8555.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8555.t1
Unique NameGgra8555.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length402
Homology
BLAST of Ggra8555.t1 vs. uniprot
Match: A0A2V3J4T8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4T8_9FLOR)

HSP 1 Score: 214 bits (544), Expect = 9.490e-62
Identity = 178/432 (41.20%), Postives = 225/432 (52.08%), Query Frame = 0
Query:   13 SRRCGMCSACNSMPPWAPERIRLLSAQQRDELLRRMAEKQRRFIERRDARKRRHTQSEQ------------EPENQ---LNGP-----------NLGAEELEEQVPDGQTDGDARGLTESDDEGDEPVVDSQPADIA--HRTIGD-------------MLQQQSPQTQATDAPLHAVPLRDTDSDADSFHTAEENGEQQQRLRDEVPQPQSEEAKLSDLIQSVDFQQLNVSDVTSEPYKSPQSIDSNIITKGSSESDAATLSASLPHPLET--ASLTTQESTPFQTGPNPQHLAHLPSENLEDTVSARRQT-RTHIHEKSF--LERYDLPPDLVPLRSEISLQS--SPIMCSDCERWRARVQELELKVEALTSALTAREMETSAMRARVAAGRNQRMPKTTAQLTEECENLRFTTEFLFHKLERYEREEAEK 396
            SRRCGMC AC+SMPPWAPER+R  + ++R  L +RM EKQR FIE+RDAR RR   ++Q            EP+N+   ++ P           +L   +L   V +  +   A    E     D       P      HRT  +               Q+Q P + +  AP+  + L+D +SD DSFHTAE+       L   +P     E     L  S             +P  SP  + S   T         TLS  +  PL+T  AS  +Q S  F++         L SENLE+TV ARR+  R H  E S   L+ Y LP DL+PLRS+ SL        C DCERWR RVQELELK+EALTSALTA EME+S MRAR AA R QR+PKT AQL EECE+LR TT+FL+HKLERYER E++K
Sbjct:   10 SRRCGMCGACDSMPPWAPERLRNATPEERAALEKRMREKQRLFIEQRDARLRRTKAAQQDSLPLVSSPIRVEPKNEEQKISQPKPQENPMQAVQSLPWSDLSSTVEERASPSHALQQNEFTPHVDNSTSPPSPPKRLPLHRTAPEEPPQNPTEVQSAKQPQEQDPSSPSA-APMRTISLQDFESDVDSFHTAEDED-----LHTPLPTSPQHETAHPTLSHSP------------KPVHSPLHVQSIHPTSTEPNLRPTTLSDPISDPLQTNKASQQSQTSDDFRS---------LVSENLEETVIARRRRHRNHSRENSLAILDDYQLPADLLPLRSDASLDRVIPQPPCVDCERWRTRVQELELKIEALTSALTALEMESSTMRARTAA-RTQRLPKTAAQLAEECESLRVTTQFLYHKLERYERAESDK 413          
BLAST of Ggra8555.t1 vs. uniprot
Match: R7QBF7 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBF7_CHOCR)

HSP 1 Score: 120 bits (300), Expect = 1.150e-26
Identity = 101/291 (34.71%), Postives = 142/291 (48.80%), Query Frame = 0
Query:  145 LHAVPLRDTDSDADSFHTAEENGEQQQRLRDEVPQPQSEEAKLSDLIQSVDFQQLNVSDVTSEPYKSPQSIDSNIITKGSSESDAATLSASLPHP---------------LETASLTTQESTPFQTGP------------------------NPQH-LAHLPSENLEDTVSARRQ-TRTHIHEKSF--LERYDLPPDLVPLRSEISLQSSPIMCSDCERWRARVQELELKVEALTSALTAREMETSAMRARVAAGRNQRMPKTTAQLTEECENLRFTTEFLFHKLERYERE 392
            + A+  + ++SDADSFHTAEE  +         P+  SE          +D  ++ + D        P   ++  +  GS  SD    S ++P                 + T    T   TP Q  P                        +P+H    LPSENLED+VSARR   R H  +  F   E Y LP D+V LRS  S   +P+ C DCERWR RV+EL+ KVE LT+AL AR+ME +++RA+  AG+ +   +  ++L +E  +LR TTEFL+ KLERYER+
Sbjct:  132 MSAMSFKSSESDADSFHTAEEVADD--------PRDNSE----------LDMVEVAIDD--------PALPETPAVDHGSDASDDFVSSRAIPEEQPVGSDEKEINESSVISTQGNATATETPLQQDPAKVEGQARAGSSNEAIPTMSMLQLSPEHSFTSLPSENLEDSVSARRTPAREHSRQGPFAPFEEYPLPSDIVTLRSADS--ETPLKCEDCERWRGRVEELQTKVERLTAALAARDMECASLRAKH-AGKLREPNRAESRLIQERNSLRVTTEFLYRKLERYERD 393          
The following BLAST results are available for this feature:
BLAST of Ggra8555.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J4T89.490e-6241.20Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QBF71.150e-2634.71Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 318..345
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 203..260
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..182
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000191_piloncontigtig00000191_pilon:171500..172838 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8555.t1Ggra8555.t1Gracilaria gracilis GNS1m malemRNAtig00000191_pilon 171500..172838 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8555.t1 ID=Ggra8555.t1|Name=Ggra8555.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=402bp
MSALPDLSASSPSRRCGMCSACNSMPPWAPERIRLLSAQQRDELLRRMAE
KQRRFIERRDARKRRHTQSEQEPENQLNGPNLGAEELEEQVPDGQTDGDA
RGLTESDDEGDEPVVDSQPADIAHRTIGDMLQQQSPQTQATDAPLHAVPL
RDTDSDADSFHTAEENGEQQQRLRDEVPQPQSEEAKLSDLIQSVDFQQLN
VSDVTSEPYKSPQSIDSNIITKGSSESDAATLSASLPHPLETASLTTQES
TPFQTGPNPQHLAHLPSENLEDTVSARRQTRTHIHEKSFLERYDLPPDLV
PLRSEISLQSSPIMCSDCERWRARVQELELKVEALTSALTAREMETSAMR
ARVAAGRNQRMPKTTAQLTEECENLRFTTEFLFHKLERYEREEAEKNDHA
R*
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