Ggra840.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra840.t1
Unique NameGgra840.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length425
Homology
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BLAST of Ggra840.t1 vs. uniprot
Match: R7QDL8 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDL8_CHOCR)

HSP 1 Score: 139 bits (351), Expect = 3.610e-33
Identity = 137/434 (31.57%), Postives = 203/434 (46.77%), Query Frame = 0 
Query:   54 VPRGRSYHGKPLSAAAHAAQQGYFARKAAKLYAERKK-AVSAGAPVAAGATAAAPAGSPHGDHVAVQADMSAAL--------------------------KAANHNQPPVDVINITVDAQGVKIDE--------NKPRLSAALAPRNNSRARMT--------RSSSRQ---RNVHGRTDDKENFVTDARL-------DAHIEAYFIRKRAS-VASVAAAVAPPTTPADSRVTEHSATS------NHSWDGSMPKRRNSRSVIERDHAISQRVSPSLNAKPGSAAVTARQAGLSESCELNKVDANEAVKQSCEAGTQSSCA-----EVPSSGKWCDECAGVGLHISALLSELQTQRPVPEAGAADMSSSCSGSGAKKGWKSVVTQTVLGDSKSRSSSEKAKLQQEINVLRATVDFLYKKIERVDGNDSTSATSAS 422
            +PRGRS+HG      A AAQ G+  R AAK+ AE+KK AV+A +   A  T      +   D + +  D    +                          K+ N  +   D  NIT D    K  E         K  +  +   R+     ++        R SSR    R V  +T   +N   +AR+       D  +     R+R+  +A++  ++    T  ++   + SA        N+  D  +  ++NS++ I  D  +  + +  L+       + + QAG            NEA+ +   +     C      EVP+SGKWCD+CAG+GLHI+ALLS+L   R   ++ +   SSSC+   +KKGWKS+VTQT+LGDSKS+SS+EKA+LQQEINVL+ATVDFLYKK+E +         SAS
Sbjct:   43 MPRGRSFHGSRNLTPAQAAQDGFHHRLAAKMLAEKKKKAVAAQSDRQALDTRDVDKEAEPTDVINITVDAKGVMIDSAKGTTQGMGGRSNSRSRMTRSTSKSRNSFRRADDKENITADVPSFKAVEADVAAYFGRKRSVDLSRRKRDTENDNLSSWDGSMPKRQSSRSFIDRKVGTKTSATQNGEAEARVMSLAPPSDTDVNDRPRRRRSQKLAALKKSLEEEGTKIEALKQQFSAVDLNGTYQNNPSDEDITGKQNSQTTIRADARLEAQANTPLSG------IRSLQAGGCVKIRREMNAGNEAISRGVHSVRAEECPDRNGREVPASGKWCDDCAGLGLHIAALLSQLDKARSTTDSSSEGSSSSCN---SKKGWKSMVTQTMLGDSKSKSSTEKARLQQEINVLKATVDFLYKKVETLGSGRRVGEGSAS 467
The following BLAST results are available for this feature:
BLAST of Ggra840.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QDL83.610e-3331.57Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 379..406
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 224..256
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..187
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..244

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000202_piloncontigtig00000202_pilon:42692..43966 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra840.t1Ggra840.t1Gracilaria gracilis GNS1m malemRNAtig00000202_pilon 42692..43966 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra840.t1 ID=Ggra840.t1|Name=Ggra840.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=425bp
MAAVQPKSDMPPPPPPAPSAAAAVAAAPARSRSSRKLPRPGTFSHARLPR
TPSVPRGRSYHGKPLSAAAHAAQQGYFARKAAKLYAERKKAVSAGAPVAA
GATAAAPAGSPHGDHVAVQADMSAALKAANHNQPPVDVINITVDAQGVKI
DENKPRLSAALAPRNNSRARMTRSSSRQRNVHGRTDDKENFVTDARLDAH
IEAYFIRKRASVASVAAAVAPPTTPADSRVTEHSATSNHSWDGSMPKRRN
SRSVIERDHAISQRVSPSLNAKPGSAAVTARQAGLSESCELNKVDANEAV
KQSCEAGTQSSCAEVPSSGKWCDECAGVGLHISALLSELQTQRPVPEAGA
ADMSSSCSGSGAKKGWKSVVTQTVLGDSKSRSSSEKAKLQQEINVLRATV
DFLYKKIERVDGNDSTSATSASSR*
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