Ggra8383.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8383.t1
Unique NameGgra8383.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length196
Homology
BLAST of Ggra8383.t1 vs. uniprot
Match: A0A2V3IG95 (COP9 signalosome complex subunit 8 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG95_9FLOR)

HSP 1 Score: 243 bits (620), Expect = 3.940e-79
Identity = 127/195 (65.13%), Postives = 152/195 (77.95%), Query Frame = 0
Query:    1 MSTIAAAVESLDAARVVELCEDAELTAAEKNDVHPFPVFHLLGLLLLEDLNEARFFWKRLPPLCQENTETKAAWNLAQALWKRDNCEFFQAAEWPHWSKEAVHVVKELVRRKREAAKLLVERSYSCISLQRAEALLGLDQPALRQLCQAEEWVLDDDFILISTVKNNHKIPNHAAVQQRELQVLTEQLIKLQTTS 195
            MS I AAVE+LD + +  LCE+AELTAAE N+VHPFP FH+L  LL  DL+EARF WKRLPP C+ + ET+AAW LAQALW+RD+  FF+AAE   WSKEA H+VKELVR+KREAA   VER YS IS++RA A LGL+   L  LCQ +EWV++D FILI+ VK+N    N+AAVQQ ELQ+LTEQLIKLQTTS
Sbjct:    1 MSKIVAAVEALDISLLTRLCEEAELTAAENNEVHPFPTFHILSALLDADLSEARFLWKRLPPQCKADAETRAAWALAQALWQRDSRGFFEAAE-QQWSKEAGHLVKELVRQKREAAIRHVERGYSRISMERAGATLGLNHSGLVDLCQRQEWVIEDGFILINNVKHNRDADNYAAVQQSELQMLTEQLIKLQTTS 194          
BLAST of Ggra8383.t1 vs. uniprot
Match: A0A194PKA5 (COP9 signalosome complex subunit 8 n=4 Tax=Papilio TaxID=7145 RepID=A0A194PKA5_PAPXU)

HSP 1 Score: 89.4 bits (220), Expect = 6.820e-19
Identity = 56/172 (32.56%), Postives = 85/172 (49.42%), Query Frame = 0
Query:   19 LCEDAELTAAEKND--VHPFPVFHLLGLLLLE-DLNEARFFWKRLPP-LCQENTETKAAWNLAQALWKRDNCEFFQAAEWPHWSKEAVHVVKELVRRKREAAKLLVERSYSCISLQRAEALLGLDQPALRQLCQAEEWVLDDDFILISTVKNNHKIPNHAAVQQRELQVLTE 186
            LC + E    E  +    P     LL + L + DL  A+F WKR+PP +   N E  A W + Q LWK+D    +QA    +W++   ++++ L  R RE A  L+ RSYS IS     ++ GL   A+ Q+C+  +W L +D   I  +      P H + +  +L  LTE
Sbjct:    8 LCSELEKQELEAPNGVASPTTYAQLLAIYLYQNDLCNAKFLWKRIPPNIISSNPEIAAIWTVGQKLWKKDLAGTYQALAIYNWTEPISNIIRALEERVRERALNLIGRSYSSISHNTLVSMTGLSNEAIAQICKERKWELSEDGTTIKPIPPVQPTPLHTSSED-QLFKLTE 178          
BLAST of Ggra8383.t1 vs. uniprot
Match: A0A433QAH4 (COP9 signalosome complex subunit 8 n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QAH4_9FUNG)

HSP 1 Score: 87.0 bits (214), Expect = 1.890e-17
Identity = 56/170 (32.94%), Postives = 84/170 (49.41%), Query Frame = 0
Query:    1 MSTIAAAVESLDAARVVELCE----DAELTAAEKNDVHPFPVFHLLGLLLLEDLNEARFFWKRLPP-LCQENTETKAAWNLAQALWKRDNCEFFQAAEWPHWSKEAVHVVKELVRRKREAAKLLVERSYSCISLQRAEALLGLDQPALRQLCQAEEWVLDDDFILISTVK 165
            M  I  A+ + D  R+V+ CE    D  L   E   ++   V ++ G L+L DLN ARF +KR+PP +   N+E +A W++  ALW+R + E + A +   W      +V  L    RE A  L+ ++YS IS+  A   LG       +   A+ WVLD     +  VK
Sbjct:   53 MDLINEAIAARDFKRLVDTCEQLEFDLSLYPNEAMSINEIYVPYIGGYLILNDLNSARFLYKRIPPAVTSANSELQAIWDVGIALWQRQHAEVYHAIDTFQWGSVMQPLVLALAENLRERAFHLIAKAYSSISVTEAATYLGFSVEQTVESLTAKGWVLDPTTNTLQPVK 222          
BLAST of Ggra8383.t1 vs. uniprot
Match: COP9 signalosome complex subunit 8 n=1 Tax=Amyelois transitella TaxID=680683 RepID=UPI00067E54CD (COP9 signalosome complex subunit 8 n=1 Tax=Amyelois transitella TaxID=680683 RepID=UPI00067E54CD)

HSP 1 Score: 85.5 bits (210), Expect = 2.030e-17
Identity = 54/172 (31.40%), Postives = 86/172 (50.00%), Query Frame = 0
Query:   19 LCEDAELTAAEKND--VHPFPVFHLLGLLLLE-DLNEARFFWKRLPP-LCQENTETKAAWNLAQALWKRDNCEFFQAAEWPHWSKEAVHVVKELVRRKREAAKLLVERSYSCISLQRAEALLGLDQPALRQLCQAEEWVLDDDFILISTVKNNHKIPNHAAVQQRELQVLTE 186
            LC + E    E  +    P     LL + L + DL  A+F WKR+PP +   N E  A W + Q LWK+D    +QA     W++   ++++ L  + RE A  L+ +SYS IS+    A+ GL + A+ Q C+  +W L +D + ++        P H + +  +L  LTE
Sbjct:    8 LCGELEKNELEAPNGIASPTTYGQLLAIYLYQNDLCNAKFLWKRIPPNILSSNPEIPAIWAVGQKLWKKDLAGTYQALAAFTWTEPVSNIIRALEEKVRERAFNLIGQSYSSISIDTVIAMTGLSKEAVLQACRDRKWELAEDGVTVNPTPPTQPAPLHTSSED-QLFKLTE 178          
BLAST of Ggra8383.t1 vs. uniprot
Match: A0A2V0P3G3 (CSN8_PSD8_EIF3K domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P3G3_9CHLO)

HSP 1 Score: 84.7 bits (208), Expect = 5.190e-17
Identity = 53/149 (35.57%), Postives = 78/149 (52.35%), Query Frame = 0
Query:    6 AAVESLDAARVVELCEDAELTAAEKNDVHP-FPV-FHLLGLLLLEDLNEARFFWKRLPPLCQENTETKAAWNLAQALWKRDNCEFFQAAEWPHWSKEAVHVVKELVRRKREAAKLLVERSYSCISLQRAEALLGLDQPALRQLCQAEEW 152
            AA+E+ +   V  + + AEL +++ N +   +PV  H+LG +   +L +ARF WKRLPP  Q   E  AAW L +  W R+    +QA +   WS     +V+ LV   R     LV  +YS +S  RA  LLG+ +   RQL +   W
Sbjct:   10 AALEAKEFGEVAPILDQAELESSDPNVLSADWPVALHILGHIYNNNLEDARFLWKRLPPQQQAAPEADAAWRLLRFAWNRNYVATWQALQAHQWSAGVQPLVEALVESTRRRMLALVAAAYSQVSPARAAELLGVSEADARQLARDMGW 158          
BLAST of Ggra8383.t1 vs. uniprot
Match: A0A7S3M1D0 (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M1D0_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.770e-16
Identity = 50/146 (34.25%), Postives = 68/146 (46.58%), Query Frame = 0
Query:   20 CEDAELTAAEKNDVHPFP----------VFHLLGLLLLEDLNEARFFWKRLPPLCQENTETKAAWNLAQALWKRDNCEFFQAAEWPHWSKEAVHVVKELVRRKREAAKLLVERSYSCISLQRAEALLGLDQPALRQLCQAEEWVLD 155
            CE+ ELT  E+    P P            HLL  LL + LN ARF WKR+P   Q++ +   A  + +A W+    EFF+      W      ++ ++V R RE     +  +Y  IS  R  ALLGLD  A RQ C    W +D
Sbjct:    1 CEELELTIQEELAEVPTPDQASQLGFLYSVHLLACLLDDQLNAARFLWKRIPDAVQQHAQVALAHGVLEARWQCKFPEFFRQLTSGPWDASLQPLLAQVVARSREQLLDKIGNAYKAISADRVAALLGLDAAAARQACGQRGWPVD 146          
BLAST of Ggra8383.t1 vs. uniprot
Match: COP9 signalosome complex subunit 8 n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0005D05A0C (COP9 signalosome complex subunit 8 n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0005D05A0C)

HSP 1 Score: 81.6 bits (200), Expect = 5.970e-16
Identity = 54/173 (31.21%), Postives = 85/173 (49.13%), Query Frame = 0
Query:   18 ELCEDAELTAAEKND--VHPFPVFHLLGLLLLE-DLNEARFFWKRLPP-LCQENTETKAAWNLAQALWKRDNCEFFQAAEWPHWSKEAVHVVKELVRRKREAAKLLVERSYSCISLQRAEALLGLDQPALRQLCQAEEWVLDDDFILISTVKNNHKIPNHAAVQQRELQVLTE 186
            +LC + E    E  +    P     LL + L + DL  A+F WKR+PP +   N E  A W + Q LWK+D    +QA     W++    ++K L  + RE +  L+  SYS ISL+   ++ GL + A+   C+  +W LD D + ++        P H + +  +L  LTE
Sbjct:    7 KLCGELEKQELEATNGIATPSTYAQLLAIYLYQNDLCNAKFLWKRIPPTITSSNPEIVAIWAIGQKLWKKDLPGTYQAITAYTWTEPVASIIKALEDKVRERSFALIGSSYSSISLEAVASMSGLSKDAVLHACRDLKWELDADGVTVAPKPPTTPQPLHTSSED-QLFKLTE 178          
BLAST of Ggra8383.t1 vs. uniprot
Match: A0A250WT66 (CSN8_PSD8_EIF3K domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WT66_9CHLO)

HSP 1 Score: 80.5 bits (197), Expect = 2.150e-15
Identity = 52/197 (26.40%), Postives = 99/197 (50.25%), Query Frame = 0
Query:    1 MSTIAAAVESLDAARVVELCEDAELTAAEKNDVHPFP-VFHLLGLLLLEDLNEARFFWKRLPP-LCQENTETKAAWNLAQALWKRDNCEFFQAAEWPHWSKEAVHVVKELVRRKREAAKLLVERSYSCISLQRAEALLGLDQPALRQLCQAEEWVLDDDFILISTVKNN---HKIPNHAAVQQRELQVLTEQLIKLQ 192
            +  ++A+++     ++ ++ +  EL ++  + +  +P   HLLG +  ++LN+ARF WKR+P  + Q N E +A W L Q  W R     +QA +   WS +   +++ LV + RE    L+  +Y+ ++  +   L G+ Q      C+   W +DD   +   +  N    K+ + A +QQ     +TE +I L+
Sbjct:    6 IDAVSASLQERHYEQLSKILDACELESSNPHVLEDWPCALHLLGHIYNQNLNDARFLWKRIPASVKQNNPELEAVWRLLQFAWSRQYQGLWQALQGYQWSTQLQPLIESLVIKMREHLLDLISTAYATVTPAKIALLCGMTQAETLSTCRLLGWQIDDSTGMCKVLPKNTEGKKLDSAANLQQ-----MTEYMIHLE 197          
BLAST of Ggra8383.t1 vs. uniprot
Match: A0A1Y1INE9 (CSN8_PSD8_EIF3K domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1INE9_KLENI)

HSP 1 Score: 78.2 bits (191), Expect = 1.810e-14
Identity = 49/156 (31.41%), Postives = 78/156 (50.00%), Query Frame = 0
Query:   38 VFHLLGLLLLEDLNEARFFWKRLPPLCQ-ENTETKAAWNLAQALWKRDNCEFFQAAEWPHWSKEAVHVVKELVRRKREAAKLLVERSYSCISLQRAEALLGLDQPALRQLCQAEEWVLDDDFILISTVKNNHKIPNHAAVQQRELQVLTEQLIKLQ 192
            V HLLG ++L+DLN ARF WKR+P   +  N E +AAW + QALW+ D  E  +A +   W++ A  +V  +          L+  SYS + +  A  +LG+       L     W +D    +++T K+  +      V    LQ LT+ + +L+
Sbjct:   50 VLHLLGHVILQDLNSARFLWKRIPQSMKLSNPELQAAWRIVQALWQHDRPEVHRALKGYAWTQPAQGLVTAIGEEFGMQMFKLLSTSYSSMYVDEAARILGVTTAETIALALQRGWSVDPTSKILTTTKSRERPEQKTDVSH--LQNLTDYVFQLE 203          
BLAST of Ggra8383.t1 vs. uniprot
Match: A0A383WK66 (COP9 signalosome complex subunit 8 n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WK66_TETOB)

HSP 1 Score: 77.8 bits (190), Expect = 2.290e-14
Identity = 45/142 (31.69%), Postives = 72/142 (50.70%), Query Frame = 0
Query:   16 VVELCEDAELTAAEKNDVHPFP-VFHLLGLLLLEDLNEARFFWKRLP-PLCQENTETKAAWNLAQALWKRDNCEFFQAAEWPHWSKEAVHVVKELVRRKREAAKLLVERSYSCISLQRAEALLGLDQPALRQLCQAEEWVLD 155
            V  + + AEL ++  + ++ +P   HLLGL+ ++ L +ARF WKRLP  + ++N E  A W L Q  W +     +QA +   WS +    V  LV + R     L+   YS +S  +A  LLG+ +  +  L +   W  D
Sbjct:   22 VAPILDAAELESSNPDVLNQWPHTLHLLGLIYIQQLEDARFLWKRLPIDVKRDNPELDAVWRLLQYFWNQHYQGIWQALQGYQWSPQVRPFVDALVAKTRSDMLALLSEGYSLLSPAKAALLLGVSEGEVAHLVEPAGWKQD 163          
The following BLAST results are available for this feature:
BLAST of Ggra8383.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IG953.940e-7965.13COP9 signalosome complex subunit 8 n=1 Tax=Gracila... [more]
A0A194PKA56.820e-1932.56COP9 signalosome complex subunit 8 n=4 Tax=Papilio... [more]
A0A433QAH41.890e-1732.94COP9 signalosome complex subunit 8 n=1 Tax=Jimgerd... [more]
COP9 signalosome complex subunit 8 n=1 Tax=Amyelois transitella TaxID=680683 RepID=UPI00067E54CD2.030e-1731.40COP9 signalosome complex subunit 8 n=1 Tax=Amyeloi... [more]
A0A2V0P3G35.190e-1735.57CSN8_PSD8_EIF3K domain-containing protein n=1 Tax=... [more]
A0A7S3M1D01.770e-1634.25Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
COP9 signalosome complex subunit 8 n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0005D05A0C5.970e-1631.21COP9 signalosome complex subunit 8 n=1 Tax=Plutell... [more]
A0A250WT662.150e-1526.40CSN8_PSD8_EIF3K domain-containing protein n=1 Tax=... [more]
A0A1Y1INE91.810e-1431.41CSN8_PSD8_EIF3K domain-containing protein n=1 Tax=... [more]
A0A383WK662.290e-1431.69COP9 signalosome complex subunit 8 n=1 Tax=Tetrade... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 174..194
NoneNo IPR availableGENE3D1.25.40.990coord: 17..163
e-value: 3.1E-12
score: 48.3
NoneNo IPR availablePANTHERPTHR13339:SF1BNAA08G07630D PROTEINcoord: 4..191
IPR033464CSN8/PSMD8/EIF3KPFAMPF10075CSN8_PSD8_EIF3Kcoord: 40..166
e-value: 7.2E-21
score: 74.7
IPR033205COP9 signalosome, subunit CSN8PANTHERPTHR13339COP9 SIGNALOSOME COMPLEX SUBUNIT 8coord: 4..191
IPR000717Proteasome component (PCI) domainPROSITEPS50250PCIcoord: 9..176
score: 11.644337

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:299071..299658 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8383.t1Ggra8383.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 299071..299658 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8383.t1 ID=Ggra8383.t1|Name=Ggra8383.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=196bp
MSTIAAAVESLDAARVVELCEDAELTAAEKNDVHPFPVFHLLGLLLLEDL
NEARFFWKRLPPLCQENTETKAAWNLAQALWKRDNCEFFQAAEWPHWSKE
AVHVVKELVRRKREAAKLLVERSYSCISLQRAEALLGLDQPALRQLCQAE
EWVLDDDFILISTVKNNHKIPNHAAVQQRELQVLTEQLIKLQTTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033464CSN8_PSD8_EIF3K
IPR033205COP9_CSN8
IPR000717PCI_dom