Ggra7573.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7573.t1
Unique NameGgra7573.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length143
Homology
BLAST of Ggra7573.t1 vs. uniprot
Match: A0A2V3IVN0 (Profilin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVN0_9FLOR)

HSP 1 Score: 253 bits (645), Expect = 1.310e-84
Identity = 120/142 (84.51%), Postives = 132/142 (92.96%), Query Frame = 0
Query:    1 MSWDPYVQTLVEAGFHHACIAGQDGHIWGTTPGFKMQSKEIIRLHSVLVDDTEAIQAIKQSGFTLCMMPYALNRLEDSEDDFRMLVARCKKAGKPARGAIVAKTAKSIIIGIHDPVYSDGQSFGRAKVAVFQLAETLIAMNF 142
            MSWDPYV TLVEAGFHHACIAG DGH+WG+TP FK+Q+ EIIRL SVL+DD EAI+A  +SGFTLC+MPYALNRL+++EDD RMLV RCKKAGKPARGAIVAKTAKSIIIGIHDPVYSDG+SFGRAKVAVFQLAETLIAMNF
Sbjct:    1 MSWDPYVDTLVEAGFHHACIAGHDGHVWGSTPDFKVQNAEIIRLVSVLLDDPEAIRAAYKSGFTLCVMPYALNRLDEAEDDLRMLVGRCKKAGKPARGAIVAKTAKSIIIGIHDPVYSDGKSFGRAKVAVFQLAETLIAMNF 142          
BLAST of Ggra7573.t1 vs. uniprot
Match: A0A7S0ZK44 (Profilin n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZK44_9RHOD)

HSP 1 Score: 109 bits (272), Expect = 7.560e-28
Identity = 53/138 (38.41%), Postives = 80/138 (57.97%), Query Frame = 0
Query:    1 MSWDPYVQT-LVEAGFHHACIAGQDGHIWGTTPGFKMQSKEIIRLHSVLVDDTEAIQAIKQSGFTLCMMPYALNR--LEDSEDDFRMLVARCKKAGKPARGAIVAKTAKSIIIGIHDPVYSDGQSFGRAKVAVFQLAE 135
            MSW  YV   L+ AGF +A I G DG +W  +PG+ +   E ++L  +L    E + +I   GF +    YA  R  ++D +     L  RCK+ GK A+G IV +T K++IIG+HDP YS+G SFG+    + ++A+
Sbjct:    1 MSWQTYVDANLLGAGFCYAAICGHDGAMWANSPGYTVLPAEAVKLDGLLSGTMENLSSIANGGFYVAGQKYAFTRGEVDDEDGGVPFLQGRCKEEGKSAQGIIVYRTGKALIIGVHDPAYSNGASFGKVNTEIGKVAD 138          
BLAST of Ggra7573.t1 vs. uniprot
Match: A0A7S1TMC4 (Profilin n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TMC4_9RHOD)

HSP 1 Score: 108 bits (271), Expect = 1.070e-27
Identity = 52/145 (35.86%), Postives = 84/145 (57.93%), Query Frame = 0
Query:    1 MSWDPYVQT-LVEAGFHHACIAGQDGHIWGTTPGFKMQSKEIIRLHSVLVDDTEAIQAIKQSGFTLCMMPYALNR--LEDSEDDFRMLVARCKKAGKPARGAIVAKTAKSIIIGIHDPVYSDGQSFGRAKVAVFQLAETLIAMNF 142
            MSW  Y+ + L+ AGF +A I G DG  W  +PG+ +   E  +L+S+L    + + +I   GF +    YA  R  ++D +     L  RCK+ GK A+G I+ +TAK++I+G+HDP YS+G SFG+    + ++A+ +    F
Sbjct:    1 MSWQTYIDSNLLGAGFCYASICGHDGSTWACSPGYTVLPAEASKLNSLLSGTMDDLNSIASGGFYVAGQKYAFTRGEVDDEDGGVPYLQGRCKEEGKSAQGIIIYRTAKALIVGVHDPAYSNGASFGKVNTEIGKVADYMFENGF 145          
BLAST of Ggra7573.t1 vs. uniprot
Match: A0A5J4YIH8 (Profilin n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YIH8_PORPP)

HSP 1 Score: 108 bits (270), Expect = 1.560e-27
Identity = 57/146 (39.04%), Postives = 84/146 (57.53%), Query Frame = 0
Query:    1 MSWDPYV-QTLVEAGFHHACIAGQDGHIWGTTPGFKMQSKEIIRLHSVLVDDTEAIQA-IKQSGFTLCMMPYALNRLEDSEDDFRM--LVARCKKAGKPARGAIVAKTAKSIIIGIHDPVYSDGQSFGRAKVAVFQLAETLIAMNF 142
            MSW  YV Q L+ AGF +A I G DG  W  +PG+ +   E  RL  +L  D + I   +   GF +    YA  R E  +DD  +  L  RCK+ GK A+G I+ +TA+++IIG HDP YS+G SF +A + + ++A+ +   +F
Sbjct:    1 MSWQTYVDQNLLGAGFCYAAIVGHDGSTWAASPGYTVLPDEAARLAQLLGGDADTINTQLSSGGFKVAGQQYAFTRAEVDDDDGGVPTLQGRCKEEGKSAQGIIIYRTAQALIIGCHDPAYSNGASFNKANMEMGKVADYMFENSF 146          
BLAST of Ggra7573.t1 vs. uniprot
Match: A0A1X6NT81 (Profilin n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NT81_PORUM)

HSP 1 Score: 100 bits (250), Expect = 1.500e-24
Identity = 48/145 (33.10%), Postives = 83/145 (57.24%), Query Frame = 0
Query:    1 MSWDPYVQT-LVEAGFHHACIAGQDGHIWGTTPGFKMQSKEIIRLHSVLVDDTEAIQAIKQSGFTLCMMPYALNR--LEDSEDDFRMLVARCKKAGKPARGAIVAKTAKSIIIGIHDPVYSDGQSFGRAKVAVFQLAETLIAMNF 142
            MSW  Y+   L+ AGF +A I G DG  W  +PG+ +  +E   L ++L   + ++++I   GF++    YA  R  ++D E     +  RCK+ GK ++G IV +T  ++++G+HDP Y++G SFG+    + +LA+  +   F
Sbjct:    1 MSWQSYIDDQLLAAGFSYASIVGHDGTTWACSPGYSVLPEEAKSLATLL--SSTSLESIAGPGFSVAGQRYAFTRGEVDDDEGGVPFIQGRCKEEGKSSQGVIVMRTTSALLVGVHDPAYANGASFGKVNTDIGRLADYFVESGF 143          
BLAST of Ggra7573.t1 vs. uniprot
Match: A0A7S1TDT3 (Profilin n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TDT3_9RHOD)

HSP 1 Score: 99.8 bits (247), Expect = 4.240e-24
Identity = 51/145 (35.17%), Postives = 80/145 (55.17%), Query Frame = 0
Query:    1 MSWDPYVQ-TLVEAGFHHACIAGQDGHIWGTTPGFKMQSKEIIRLHSVLVDDTEAIQAIKQSGFTLCMMPYALNRLE--DSEDDFRMLVARCKKAGKPARGAIVAKTAKSIIIGIHDPVYSDGQSFGRAKVAVFQLAETLIAMNF 142
            MSW  Y+   L+ AGF +A I G DG  W ++ G+ +   E  R  S+L   +  + ++  +GFT     YA  R E  D       +  RCK+ GK ++G I+ KT +++I+G+HDP YS+G SFG A  A+ ++A+  +   F
Sbjct:    1 MSWQDYIDGQLLRAGFCYASIVGFDGSCWASSQGYVILPDEAKRFASLLAGTS--LDSLSAAGFTAAGQKYAFTRGEVNDPNGSVPFIQGRCKEDGKSSQGIIIMKTTQALIVGVHDPAYSNGASFGSANTAIGRIADYFVESGF 143          
BLAST of Ggra7573.t1 vs. uniprot
Match: R7QK25 (Profilin n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QK25_CHOCR)

HSP 1 Score: 99.0 bits (245), Expect = 8.730e-24
Identity = 52/141 (36.88%), Postives = 80/141 (56.74%), Query Frame = 0
Query:    1 MSWDPYVQT-LVEAGFHHACIAGQDGHIWGTTPGFKMQSKEIIRLHSVLVDDTEAIQAIKQSGFTLCMMPYALNRLEDSEDD--FRMLVARCKKAGKPARGAIVAKTAKSIIIGIHDPVYSDGQSFGRAKVAVFQLAETLI 138
            M+W  Y+   LV AGF +A I G D   W  T  F++   E   L S+L  + ++   I  +GF +    Y + R E  +DD     L  RCK+ GK A+G I+  TA+S+I+G+HDP YS+G SFG+A   + ++A+ ++
Sbjct:    1 MTWQTYIDDHLVPAGFMYAAIVGHDASTWANTKDFQVLDAETKILVSLLTGE-KSFDEISTTGFHVAGQKYTMTRYEIDDDDGGAAFLQGRCKEEGKSAQGVIIMCTAQSLIVGVHDPKYSNGASFGKANTDIGRVADYIM 140          
BLAST of Ggra7573.t1 vs. uniprot
Match: A0A2V3IMA4 (Profilin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMA4_9FLOR)

HSP 1 Score: 97.1 bits (240), Expect = 4.940e-23
Identity = 52/144 (36.11%), Postives = 78/144 (54.17%), Query Frame = 0
Query:    2 SWDPYVQT-LVEAGFHHACIAGQDGHIWGTTPGFKMQSKEIIRLHSVLVDDTEAIQAIKQSGFTLCMMPYALNR--LEDSEDDFRMLVARCKKAGKPARGAIVAKTAKSIIIGIHDPVYSDGQSFGRAKVAVFQLAETLIAMNF 142
            SW  YV   L+ AG  +A I G DG  W ++PGF + ++E   L   LV+    +  I  SGFT+    Y   R  ++D E +      RCK+ GK A+G I+  T ++ +IG+HDP Y+DG SFG       ++A+ L+ + F
Sbjct:    3 SWQTYVDDQLMAAGCMYAAIYGHDGSKWASSPGFDISNEECEVLVEALVNSN--LGKISGSGFTIATQKYTFTRGEVDDEEGNPSYAQGRCKEEGKSAQGVIIYATTQAFVIGVHDPQYADGASFGSVNTDAGRVADYLMELGF 144          
The following BLAST results are available for this feature:
BLAST of Ggra7573.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A2V3IVN01.310e-8484.51Profilin n=1 Tax=Gracilariopsis chorda TaxID=44838... [more]
A0A7S0ZK447.560e-2838.41Profilin n=1 Tax=Timspurckia oligopyrenoides TaxID... [more]
A0A7S1TMC41.070e-2735.86Profilin n=1 Tax=Erythrolobus australicus TaxID=10... [more]
A0A5J4YIH81.560e-2739.04Profilin n=1 Tax=Porphyridium purpureum TaxID=3568... [more]
A0A1X6NT811.500e-2433.10Profilin n=1 Tax=Porphyra umbilicalis TaxID=2786 R... [more]
A0A7S1TDT34.240e-2435.17Profilin n=1 Tax=Compsopogon caeruleus TaxID=31354... [more]
R7QK258.730e-2436.88Profilin n=1 Tax=Chondrus crispus TaxID=2769 RepID... [more]
A0A2V3IMA44.940e-2336.11Profilin n=1 Tax=Gracilariopsis chorda TaxID=44838... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005455ProfilinSMARTSM00392prof_2coord: 1..142
e-value: 1.2E-5
score: 33.2
IPR005455ProfilinPFAMPF00235Profilincoord: 1..141
e-value: 1.4E-18
score: 67.2
IPR005455ProfilinPANTHERPTHR11604PROFILINcoord: 1..141
NoneNo IPR availableGENE3D3.30.450.30Dynein light chain 2a, cytoplasmiccoord: 1..142
e-value: 5.6E-23
score: 83.5
NoneNo IPR availablePANTHERPTHR11604:SF0PROFILINcoord: 1..141
IPR027310Profilin conserved sitePROSITEPS00414PROFILINcoord: 1..8
IPR036140Profilin superfamilySUPERFAMILY55770Profilin (actin-binding protein)coord: 2..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000866_piloncontigtig00000866_pilon:98840..99268 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7573.t1Ggra7573.t1Gracilaria gracilis GNS1m malemRNAtig00000866_pilon 98840..99268 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7573.t1 ID=Ggra7573.t1|Name=Ggra7573.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=143bp
MSWDPYVQTLVEAGFHHACIAGQDGHIWGTTPGFKMQSKEIIRLHSVLVD
DTEAIQAIKQSGFTLCMMPYALNRLEDSEDDFRMLVARCKKAGKPARGAI
VAKTAKSIIIGIHDPVYSDGQSFGRAKVAVFQLAETLIAMNF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005455PFN
IPR027310Profilin_CS
IPR036140PFN_sf