Ggra7237.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra7237.t1
Unique Name	Ggra7237.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	284

Homology

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BLAST of Ggra7237.t1 vs. uniprot
Match: A0A2V3IBQ3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBQ3_9FLOR)

HSP 1 Score: 92.4 bits (228), Expect = 2.160e-19
Identity = 74/150 (49.33%), Postives = 90/150 (60.00%), Query Frame = 0

Query:    8 TSEKMRS---NERVLVDITSASXXXXXXXXXXTSAKEGNERQAVTKLMAGSKANETEGGDGGHNNAARSWCTESDETPGSGASEEVENENPLLMSDISRMMETMHSKNLMLKKLVRMQQTRLEVLKTENEELRRDGKRKDARFRNAEVTI 154
            TSE   S   ++ VLVDIT  S          TS K+  E QAV +  A S ++  + G       A    TES+E           N+ P+LM+DISRMMETMHSKNLMLKKLVRMQQ RLE+LK+EN+ELR+D K   A+ RNAEVTI
Sbjct:    3 TSEPKSSQTTSQDVLVDITGGSSSS-------TSTKQ-VESQAVKQRPAQSSSSSAQEGT-----TASYKSTESNE-----------NDKPVLMNDISRMMETMHSKNLMLKKLVRMQQARLELLKSENDELRKDVKXXXAQLRNAEVTI 128

The following BLAST results are available for this feature:

BLAST of Ggra7237.t1 vs. uniprot

BLAST of Ggra7237.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IBQ3	2.160e-19	49.33	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 119..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..221
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..221
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..250
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 251..271
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 272..283

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000871_pilon	contig	tig00000871_pilon:363265..364116 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra7237.t1	Ggra7237.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000871_pilon 363265..364116 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra7237.t1 ID=Ggra7237.t1|Name=Ggra7237.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=284bp
MSAFDGGTSEKMRSNERVLVDITSASASASASAAASTSAKEGNERQAVTK
LMAGSKANETEGGDGGHNNAARSWCTESDETPGSGASEEVENENPLLMSD
ISRMMETMHSKNLMLKKLVRMQQTRLEVLKTENEELRRDGKRKDARFRNA
EVTIEYLRTEVEEQRHILERKTIKKVMIEEQSDAGHKRSNKQRDGGAKDD
SGDAVGGSVNTNSLRRTSTNSGRKRCLPLSARWAVERVTRKLNGMKRNPK
GVALCVCVCTLGGAMLLRGVLQLMNKNSECSDC*