Ggra7237.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra7237.t1
Unique NameGgra7237.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length284
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:363265..364116 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7237Ggra7237Gracilaria gracilis GNS1m malegenetig00000871_pilon 363265..364116 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7237.t1.stop1Ggra7237.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000871_pilon 363265..363267 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7237.t1.CDS1Ggra7237.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000871_pilon 363265..364116 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7237.t1.exon1Ggra7237.t1.exon1Gracilaria gracilis GNS1m maleexontig00000871_pilon 363265..364116 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7237.t1.start1Ggra7237.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000871_pilon 364114..364116 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7237.t1Ggra7237.t1Gracilaria gracilis GNS1m malepolypeptidetig00000871_pilon 363265..364116 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra7237.t1 ID=Ggra7237.t1|Name=Ggra7237.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=284bp
MSAFDGGTSEKMRSNERVLVDITSASASASASAAASTSAKEGNERQAVTK
LMAGSKANETEGGDGGHNNAARSWCTESDETPGSGASEEVENENPLLMSD
ISRMMETMHSKNLMLKKLVRMQQTRLEVLKTENEELRRDGKRKDARFRNA
EVTIEYLRTEVEEQRHILERKTIKKVMIEEQSDAGHKRSNKQRDGGAKDD
SGDAVGGSVNTNSLRRTSTNSGRKRCLPLSARWAVERVTRKLNGMKRNPK
GVALCVCVCTLGGAMLLRGVLQLMNKNSECSDC*
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spliced messenger RNA

>Ggra7237.t1 ID=Ggra7237.t1|Name=Ggra7237.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=852bp|location=Sequence derived from alignment at tig00000871_pilon:363265..364116- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCTGCATTCGATGGCGGCACGAGTGAGAAGATGAGAAGCAACGAACG
GGTTCTGGTTGACATCACCTCGGCGTCAGCTTCTGCATCGGCGTCGGCGG
CTGCTTCGACGTCCGCAAAGGAAGGCAATGAGCGTCAAGCAGTGACAAAG
CTAATGGCAGGCTCGAAAGCGAACGAGACAGAAGGCGGTGATGGCGGACA
CAACAACGCGGCCAGAAGCTGGTGCACAGAGTCTGACGAAACGCCGGGGT
CGGGGGCAAGCGAGGAGGTTGAGAACGAAAACCCGCTGCTGATGAGCGAC
ATATCACGCATGATGGAAACAATGCACTCGAAGAACCTGATGTTGAAGAA
GCTGGTGCGAATGCAGCAAACGCGTTTAGAAGTACTCAAGACGGAGAACG
AAGAGCTTCGTCGAGACGGGAAGCGCAAGGATGCTCGGTTCAGGAACGCA
GAGGTGACGATTGAATACCTACGGACGGAAGTGGAGGAGCAACGACACAT
TCTCGAAAGGAAGACAATCAAAAAGGTGATGATTGAAGAGCAGAGCGACG
CGGGGCACAAGCGAAGCAACAAGCAACGAGACGGCGGCGCAAAGGACGAC
AGCGGCGACGCAGTCGGAGGCAGCGTGAACACAAACTCATTACGAAGAAC
AAGCACCAACAGCGGGCGCAAGCGGTGCCTCCCTCTGTCCGCAAGATGGG
CAGTAGAGCGGGTGACGCGCAAACTGAACGGGATGAAAAGAAACCCAAAG
GGTGTGGCACTGTGCGTGTGCGTGTGCACACTCGGCGGCGCCATGCTGCT
CCGCGGCGTGCTGCAGCTAATGAACAAGAACTCGGAGTGTTCCGACTGCT
AA
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protein sequence of Ggra7237.t1

>Ggra7237.t1 ID=Ggra7237.t1|Name=Ggra7237.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=284bp
MSAFDGGTSEKMRSNERVLVDITSASASASASAAASTSAKEGNERQAVTK
LMAGSKANETEGGDGGHNNAARSWCTESDETPGSGASEEVENENPLLMSD
ISRMMETMHSKNLMLKKLVRMQQTRLEVLKTENEELRRDGKRKDARFRNA
EVTIEYLRTEVEEQRHILERKTIKKVMIEEQSDAGHKRSNKQRDGGAKDD
SGDAVGGSVNTNSLRRTSTNSGRKRCLPLSARWAVERVTRKLNGMKRNPK
GVALCVCVCTLGGAMLLRGVLQLMNKNSECSDC*
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mRNA from alignment at tig00000871_pilon:363265..364116-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra7237.t1 ID=Ggra7237.t1|Name=Ggra7237.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=852bp|location=Sequence derived from alignment at tig00000871_pilon:363265..364116- (Gracilaria gracilis GNS1m male)
ATGTCTGCATTCGATGGCGGCACGAGTGAGAAGATGAGAAGCAACGAACG
GGTTCTGGTTGACATCACCTCGGCGTCAGCTTCTGCATCGGCGTCGGCGG
CTGCTTCGACGTCCGCAAAGGAAGGCAATGAGCGTCAAGCAGTGACAAAG
CTAATGGCAGGCTCGAAAGCGAACGAGACAGAAGGCGGTGATGGCGGACA
CAACAACGCGGCCAGAAGCTGGTGCACAGAGTCTGACGAAACGCCGGGGT
CGGGGGCAAGCGAGGAGGTTGAGAACGAAAACCCGCTGCTGATGAGCGAC
ATATCACGCATGATGGAAACAATGCACTCGAAGAACCTGATGTTGAAGAA
GCTGGTGCGAATGCAGCAAACGCGTTTAGAAGTACTCAAGACGGAGAACG
AAGAGCTTCGTCGAGACGGGAAGCGCAAGGATGCTCGGTTCAGGAACGCA
GAGGTGACGATTGAATACCTACGGACGGAAGTGGAGGAGCAACGACACAT
TCTCGAAAGGAAGACAATCAAAAAGGTGATGATTGAAGAGCAGAGCGACG
CGGGGCACAAGCGAAGCAACAAGCAACGAGACGGCGGCGCAAAGGACGAC
AGCGGCGACGCAGTCGGAGGCAGCGTGAACACAAACTCATTACGAAGAAC
AAGCACCAACAGCGGGCGCAAGCGGTGCCTCCCTCTGTCCGCAAGATGGG
CAGTAGAGCGGGTGACGCGCAAACTGAACGGGATGAAAAGAAACCCAAAG
GGTGTGGCACTGTGCGTGTGCGTGTGCACACTCGGCGGCGCCATGCTGCT
CCGCGGCGTGCTGCAGCTAATGAACAAGAACTCGGAGTGTTCCGACTGCT
AA
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Coding sequence (CDS) from alignment at tig00000871_pilon:363265..364116-

>Ggra7237.t1 ID=Ggra7237.t1|Name=Ggra7237.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=852bp|location=Sequence derived from alignment at tig00000871_pilon:363265..364116- (Gracilaria gracilis GNS1m male)
ATGTCTGCATTCGATGGCGGCACGAGTGAGAAGATGAGAAGCAACGAACG
GGTTCTGGTTGACATCACCTCGGCGTCAGCTTCTGCATCGGCGTCGGCGG
CTGCTTCGACGTCCGCAAAGGAAGGCAATGAGCGTCAAGCAGTGACAAAG
CTAATGGCAGGCTCGAAAGCGAACGAGACAGAAGGCGGTGATGGCGGACA
CAACAACGCGGCCAGAAGCTGGTGCACAGAGTCTGACGAAACGCCGGGGT
CGGGGGCAAGCGAGGAGGTTGAGAACGAAAACCCGCTGCTGATGAGCGAC
ATATCACGCATGATGGAAACAATGCACTCGAAGAACCTGATGTTGAAGAA
GCTGGTGCGAATGCAGCAAACGCGTTTAGAAGTACTCAAGACGGAGAACG
AAGAGCTTCGTCGAGACGGGAAGCGCAAGGATGCTCGGTTCAGGAACGCA
GAGGTGACGATTGAATACCTACGGACGGAAGTGGAGGAGCAACGACACAT
TCTCGAAAGGAAGACAATCAAAAAGGTGATGATTGAAGAGCAGAGCGACG
CGGGGCACAAGCGAAGCAACAAGCAACGAGACGGCGGCGCAAAGGACGAC
AGCGGCGACGCAGTCGGAGGCAGCGTGAACACAAACTCATTACGAAGAAC
AAGCACCAACAGCGGGCGCAAGCGGTGCCTCCCTCTGTCCGCAAGATGGG
CAGTAGAGCGGGTGACGCGCAAACTGAACGGGATGAAAAGAAACCCAAAG
GGTGTGGCACTGTGCGTGTGCGTGTGCACACTCGGCGGCGCCATGCTGCT
CCGCGGCGTGCTGCAGCTAATGAACAAGAACTCGGAGTGTTCCGACTGCT
AA
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