Ggra7017.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7017.t1
Unique NameGgra7017.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length302
Homology
BLAST of Ggra7017.t1 vs. uniprot
Match: A0A2V3J276 (Probable ATP-dependent transporter ycf16 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J276_9FLOR)

HSP 1 Score: 284 bits (726), Expect = 1.700e-93
Identity = 139/194 (71.65%), Postives = 165/194 (85.05%), Query Frame = 0
Query:    1 MILGHNGSGKSTLLRILRGLLNPSTGDVFLGKPCAYVQQDPNLQILLPTIGTDIASSVPRNSETQPLEVRNAVMSALTAVGLTPPEEFFPKSSYRLSGGQRQRAAIAAALAMEPRTILFDEVTASMDPFNKAELVSRIRQIVTERHMAAIWVTHLLDELEFADNIVIMTNGSVVAQGPRVAMMPLVFDLQDEIE 194
            MILG NGSGKSTLLRILRGLLNPS+G V+L KPCA+VQQDPN+QIL+PTIG DIA SVP+  +T   E+  AV  ALT VGL PPE F   SSYRLSGGQRQRAA+AAALAM+P++ L DEVTASMDP NKAEL+SR+R+++T+R++ AIWVTHLLDELEFADNI IM  G ++AQGPR+AMMPLV+D+QD +E
Sbjct:    1 MILGKNGSGKSTLLRILRGLLNPSSGHVYLEKPCAFVQQDPNIQILMPTIGMDIAVSVPKKPDTSRSELWGAVREALTEVGLVPPEYFMRMSSYRLSGGQRQRAAVAAALAMKPKSFLLDEVTASMDPLNKAELISRVRRLITDRNIGAIWVTHLLDELEFADNIAIMGEGRILAQGPRIAMMPLVYDMQDNVE 194          
BLAST of Ggra7017.t1 vs. uniprot
Match: R7Q7C5 (Probable ATP-dependent transporter ycf16 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7C5_CHOCR)

HSP 1 Score: 243 bits (619), Expect = 2.920e-76
Identity = 112/193 (58.03%), Postives = 158/193 (81.87%), Query Frame = 0
Query:    1 MILGHNGSGKSTLLRILRGLLNPSTGDVFLGKPCAYVQQDPNLQILLPTIGTDIASSVPRNSETQPLEVRNAVMSALTAVGLTPPEEFFPKSSYRLSGGQRQRAAIAAALAMEPRTILFDEVTASMDPFNKAELVSRIRQIVTERHMAAIWVTHLLDELEFADNIVIMTNGSVVAQGPRVAMMPLVFDLQDEI 193
            M++G NG GKSTLLR++RGLL PS G V L  PCA+V Q+P++Q+L P++ TDIA+SVP+  +    E+R++V+ A+ AVGL+PPE++   S++RLSGGQRQRA +A+ALAM P T+LFDE TASMDP N+AELV+R+R++V+ER +AA+WVTHLL+EL+ AD I++M  G + A GPRVAMMPL++++QD++
Sbjct:   75 MLVGPNGCGKSTLLRVVRGLLIPSYGSVQLSTPCAFVHQNPDVQMLFPSVATDIAASVPKRPDMPVDEIRDSVIEAMEAVGLSPPEKYMRLSAHRLSGGQRQRAVVASALAMRPTTMLFDEATASMDPVNRAELVARVRRVVSERSIAALWVTHLLEELDVADTIIVMRGGKITAHGPRVAMMPLIYEMQDQV 267          
BLAST of Ggra7017.t1 vs. uniprot
Match: A0A2D2Q1H0 (LuxR family transcriptional regulator n=1 Tax=Synechococcus lividus PCC 6715 TaxID=1917166 RepID=A0A2D2Q1H0_THELV)

HSP 1 Score: 164 bits (416), Expect = 4.730e-46
Identity = 87/190 (45.79%), Postives = 127/190 (66.84%), Query Frame = 0
Query:    1 MILGHNGSGKSTLLRILRGLLNPSTGDVFLGKPCAYVQQDPNLQILLPTIGTDIASSVPRNSETQPLEVRNAVMSALTAVGLTPPEEFFPKSSYRLSGGQRQRAAIAAALAMEPRTILFDEVTASMDPFNKAELVSRIRQIVTERHMAAIWVTHLLDELEFADNIVIMTNGSVVAQGPRVAMMPLVFDLQ 190
            M+LG NGSGKSTL+R+L GLL P +G+ ++ +P  +V Q+P+ Q+++P++G DIA S+   S T   EVR  V +AL AV L   E    +  Y LSGGQ+QR AIA A+A + R +L DE TA +DP ++ EL+  +RQ+V  + + A+WVTH L+EL  AD  +++ NG ++ QG   AMMPL++  Q
Sbjct:   44 MLLGRNGSGKSTLIRLLAGLLPPESGECYIAQPFGFVFQNPDHQLVMPSVGADIAFSLNGESLTY-WEVRQRVSAALQAVNLQGLER---RPIYALSGGQKQRVAIAGAIARQCRVLLLDEPTALLDPESQQELLDYVRQLVNCQGITALWVTHRLNELAQADGAIVLDNGKIIGQGAPAAMMPLIYQQQ 229          
BLAST of Ggra7017.t1 vs. uniprot
Match: V5V8C1 (ABC-type transport system ATPase component n=7 Tax=Cyanobacteria TaxID=1117 RepID=V5V8C1_9CYAN)

HSP 1 Score: 157 bits (396), Expect = 2.970e-43
Identity = 87/186 (46.77%), Postives = 121/186 (65.05%), Query Frame = 0
Query:    1 MILGHNGSGKSTLLRILRGLLNPSTGDVFLGKPCAYVQQDPNLQILLPTIGTDIASSVPRNSETQPL-EVRNAVMSALTAVGLTPPEEFFPKSSYRLSGGQRQRAAIAAALAMEPRTILFDEVTASMDPFNKAELVSRIRQIVTERHMAAIWVTHLLDELEFADNIVIMTNGSVVAQGPRVAMMPL 185
            M+LG NGSGKSTL+RIL GLL P  G+V++ +P  +V Q+P+ Q+++P++G DIA S+  N E     +VR  V +AL AV L   E    +  Y LSGGQ+QR AIA A+A   R +L DE TA +DP ++ EL+  +RQ+V  + M A+WVTH LDEL  AD  +++  G V+ QG    M+PL
Sbjct:   45 MLLGRNGSGKSTLVRILGGLLQPQRGEVYVEQPLGFVFQNPDHQLVMPSVGADIAFSL--NGEALNYWQVRERVSAALQAVNLQGLER---RPIYALSGGQKQRVAIAGAIARHCRVLLLDEPTALLDPDSQRELLGYVRQLVNTQGMTALWVTHRLDELAQADGAIVLDRGKVIGQGAPTDMIPL 225          
BLAST of Ggra7017.t1 vs. uniprot
Match: A0A1E5QCU2 (LuxR family transcriptional regulator n=1 Tax=Desertifilum sp. IPPAS B-1220 TaxID=1781255 RepID=A0A1E5QCU2_9CYAN)

HSP 1 Score: 155 bits (392), Expect = 1.020e-42
Identity = 82/182 (45.05%), Postives = 120/182 (65.93%), Query Frame = 0
Query:    1 MILGHNGSGKSTLLRILRGLLNPSTGDVFLGKPCAYVQQDPNLQILLPTIGTDIASSVPRNSETQPLEVRNAVMSALTAVGLTPPEEFFPKSSYRLSGGQRQRAAIAAALAMEPRTILFDEVTASMDPFNKAELVSRIRQIVTERHMAAIWVTHLLDELEFADNIVIMTNGSVVAQGPRVAM 182
            M+LG NGSGKSTLLR+L GLL+P +G+  + KP  +V Q+P+ Q+++PT+G D+A  +     + P ++R  V  AL+AV L   +    +  Y LSGGQ+QR AIA A+A     +L DE TA +DP ++ ELVS++R++V  R + A+WVTH LDEL++ D   ++ NG VV +G R  M
Sbjct:   36 MLLGTNGSGKSTLLRVLAGLLHPQSGEREILKPVGFVFQNPDHQLVMPTVGADVAFGLVEEKLSTP-QIRQRVEEALSAVNLLDLQR---RPIYALSGGQKQRIAIAGAIARHCEVLLLDEPTALLDPDSQRELVSQVRRLVNSRGLTALWVTHRLDELDYCDGAFLLENGQVVDRGDREKM 213          
BLAST of Ggra7017.t1 vs. uniprot
Match: A0A5B8NLI5 (Energy-coupling factor ABC transporter ATP-binding protein n=1 Tax=Euhalothece natronophila Z-M001 TaxID=522448 RepID=A0A5B8NLI5_9CHRO)

HSP 1 Score: 154 bits (390), Expect = 1.970e-42
Identity = 80/178 (44.94%), Postives = 118/178 (66.29%), Query Frame = 0
Query:    1 MILGHNGSGKSTLLRILRGLLNPSTGDVFLGKPCAYVQQDPNLQILLPTIGTDIASSVPRNSETQPLEVRNAVMSALTAVGLTPPEEFFPKSSYRLSGGQRQRAAIAAALAMEPRTILFDEVTASMDPFNKAELVSRIRQIVTERHMAAIWVTHLLDELEFADNIVIMTNGSVVAQGP 178
            M+LG+NGSGKSTLL+IL GLL+P +G+ ++ +P  +V Q+P+ Q+++PT+G D+A  +     + P +VR+ V  AL+AV L   E    +  Y LSGGQ+QR AIA A+A     +L DE TA +DP  + ELV ++R +V  R M A+WVTH LDEL++ D   I+  G++  +GP
Sbjct:   36 MLLGNNGSGKSTLLKILSGLLSPQSGECYVQQPLGFVFQNPDHQLVMPTVGADVAFGLVSEGLSWP-QVRDRVQEALSAVNLLGWER---RPIYALSGGQKQRIAIAGAIARHCPVLLLDEPTALLDPETQGELVEQVRSLVKSRGMTALWVTHRLDELDYCDRAFILEEGNITKEGP 209          
BLAST of Ggra7017.t1 vs. uniprot
Match: B8HTQ7 (ABC transporter related n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) TaxID=395961 RepID=B8HTQ7_CYAP4)

HSP 1 Score: 154 bits (389), Expect = 2.940e-42
Identity = 82/177 (46.33%), Postives = 117/177 (66.10%), Query Frame = 0
Query:    1 MILGHNGSGKSTLLRILRGLLNPSTGDVFLGKPCAYVQQDPNLQILLPTIGTDIASSVPRNSETQPLEVRNAVMSALTAVGLTPPEEFFPKSSYRLSGGQRQRAAIAAALAMEPRTILFDEVTASMDPFNKAELVSRIRQIVTERHMAAIWVTHLLDELEFADNIVIMTNGSVVAQG 177
            M+LG NGSGKSTLLR+L GLL P +G + + +P  +V Q+P+ Q+++PT+G D+A S+  +    PLEVR  V  ALTAV L   +    +  Y LSGGQ+QR AIA ALA     +L DE TA +DP ++ EL + ++Q+V  RH+ A+WVTH L+EL++ D   ++  G V+ QG
Sbjct:   36 MLLGTNGSGKSTLLRLLAGLLLPQSGQLDIEQPVGFVFQNPDHQLVMPTVGADVAFSLA-SDRLPPLEVRQRVEEALTAVNLLHLQR---RPIYALSGGQKQRIAIAGALARHCEVLLLDEPTALLDPDSQRELCAYVQQLVKTRHLTALWVTHRLEELDYCDGAFLLEQGRVIDQG 208          
BLAST of Ggra7017.t1 vs. uniprot
Match: A0A8J7BZK8 (Energy-coupling factor ABC transporter ATP-binding protein n=1 Tax=Iningainema tapete BLCC-T55 TaxID=2748662 RepID=A0A8J7BZK8_9CYAN)

HSP 1 Score: 154 bits (389), Expect = 3.020e-42
Identity = 82/193 (42.49%), Postives = 120/193 (62.18%), Query Frame = 0
Query:    1 MILGHNGSGKSTLLRILRGLLNPSTGDVFLGKPCAYVQQDPNLQILLPTIGTDIASSVPRNSETQPLEVRNAVMSALTAVGLTPPEEFFPKSSYRLSGGQRQRAAIAAALAMEPRTILFDEVTASMDPFNKAELVSRIRQIVTERHMAAIWVTHLLDELEFADNIVIMTNGSVVAQGPRVAMMPLVFDLQDEI 193
            M+LG NGSGKSTLLR++ GLL P +G V +  P  +V Q+P+ Q+++PT+G D+A  +    +  P  VR  V  AL AV L P      +  Y LSGGQ+QR AIA ALA     +L DE TA +DP ++ +LV+ +R +V +RH+ A+WVTH L+EL + D   ++  GS+V QG    +   + +L +E+
Sbjct:   36 MLLGTNGSGKSTLLRLMAGLLTPQSGKVQIVPPIGFVFQNPDHQLVMPTVGADVAFGLVEE-KLSPTVVRARVEEALGAVNLQP---LLRRPIYALSGGQKQRVAIAGALARHSEVLLLDEPTALLDPDSQLDLVTSVRNLVKQRHITALWVTHRLEELNYCDGAFLLEKGSLVDQGEPERLKQCLMELHNEV 224          
BLAST of Ggra7017.t1 vs. uniprot
Match: energy-coupling factor ABC transporter ATP-binding protein n=1 Tax=Microcoleus sp. FACHB-831 TaxID=2692827 RepID=UPI00168597BC (energy-coupling factor ABC transporter ATP-binding protein n=1 Tax=Microcoleus sp. FACHB-831 TaxID=2692827 RepID=UPI00168597BC)

HSP 1 Score: 154 bits (389), Expect = 3.480e-42
Identity = 81/177 (45.76%), Postives = 118/177 (66.67%), Query Frame = 0
Query:    1 MILGHNGSGKSTLLRILRGLLNPSTGDVFLGKPCAYVQQDPNLQILLPTIGTDIASSVPRNSETQPLEVRNAVMSALTAVGLTPPEEFFPKSSYRLSGGQRQRAAIAAALAMEPRTILFDEVTASMDPFNKAELVSRIRQIVTERHMAAIWVTHLLDELEFADNIVIMTNGSVVAQG 177
            M+LG NGSGKSTLLR+L GLL P +G++ + +P  +V Q+P+ Q+++PT+G D+A  +    +    EVR  V SALTAV L   +    +  Y LSGGQ+QR AIA A+A     +L DE TA +DP ++ +LV+++RQ+V  R + A+WVTH L+EL++ D   ++  GSVV QG
Sbjct:   44 MLLGTNGSGKSTLLRLLAGLLQPQSGEIQMSRPVGFVFQNPDHQLVMPTVGADVAFGLVEE-KLSIAEVRQRVESALTAVNLLTLQR---RPIYALSGGQKQRIAIAGAIARRCEVLLLDEPTALLDPDSQLDLVAQVRQLVKSRGLTALWVTHRLEELDYCDGAFLLEKGSVVDQG 216          
BLAST of Ggra7017.t1 vs. uniprot
Match: K9RRB1 (ABC-type cobalt transport system, ATPase component n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) TaxID=195253 RepID=K9RRB1_SYNP3)

HSP 1 Score: 154 bits (388), Expect = 4.260e-42
Identity = 83/178 (46.63%), Postives = 115/178 (64.61%), Query Frame = 0
Query:    1 MILGHNGSGKSTLLRILRGLLNPSTGDVFLGKPCAYVQQDPNLQILLPTIGTDIASSVPRNSETQPLEVRNAVMSALTAVGLTPPEEFFPKSSYRLSGGQRQRAAIAAALAMEPRTILFDEVTASMDPFNKAELVSRIRQIVTERHMAAIWVTHLLDELEFADNIVIMTNGSVVAQGP 178
            M+LG NGSGKSTL+++L GLL P TG V + +P  +V Q+P+ Q+++PT+G DIA S+     T   EVR  V  AL  V L+       +  Y LSGGQ+QR AIA A+A     +L DE TA +DP ++ EL++ +R++V +R M A+WVTH L+EL  AD  V+M  G V+ QGP
Sbjct:   35 MLLGRNGSGKSTLMKLLAGLLLPQTGYVHIHQPVGFVFQNPDQQLVMPTVGADIAFSLTNQGLTS-AEVRLRVQDALATVNLSGLAR---RPIYALSGGQKQRVAIAGAIARHCEVLLLDEPTALLDPDSQQELLANVRELVKQRGMTALWVTHRLEELVAADGAVVMERGQVIEQGP 208          
The following BLAST results are available for this feature:
BLAST of Ggra7017.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J2761.700e-9371.65Probable ATP-dependent transporter ycf16 n=1 Tax=G... [more]
R7Q7C52.920e-7658.03Probable ATP-dependent transporter ycf16 n=1 Tax=C... [more]
A0A2D2Q1H04.730e-4645.79LuxR family transcriptional regulator n=1 Tax=Syne... [more]
V5V8C12.970e-4346.77ABC-type transport system ATPase component n=7 Tax... [more]
A0A1E5QCU21.020e-4245.05LuxR family transcriptional regulator n=1 Tax=Dese... [more]
A0A5B8NLI51.970e-4244.94Energy-coupling factor ABC transporter ATP-binding... [more]
B8HTQ72.940e-4246.33ABC transporter related n=1 Tax=Cyanothece sp. (st... [more]
A0A8J7BZK83.020e-4242.49Energy-coupling factor ABC transporter ATP-binding... [more]
energy-coupling factor ABC transporter ATP-binding protein n=1 Tax=Microcoleus sp. FACHB-831 TaxID=2692827 RepID=UPI00168597BC3.480e-4245.76energy-coupling factor ABC transporter ATP-binding... [more]
K9RRB14.260e-4246.63ABC-type cobalt transport system, ATPase component... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 1..172
e-value: 2.4E-6
score: 37.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..206
e-value: 3.1E-43
score: 150.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..178
IPR003439ABC transporter-like, ATP-binding domainPFAMPF00005ABC_trancoord: 2..124
e-value: 7.5E-19
score: 68.6
IPR003439ABC transporter-like, ATP-binding domainPROSITEPS50893ABC_TRANSPORTER_2coord: 1..195
score: 13.498887
NoneNo IPR availablePANTHERPTHR43514:SF4ABC TRANSPORTER I FAMILY MEMBER 10coord: 1..185
NoneNo IPR availablePANTHERPTHR43514ABC TRANSPORTER I FAMILY MEMBER 10coord: 1..185
IPR017871ABC transporter-like, conserved sitePROSITEPS00211ABC_TRANSPORTER_1coord: 96..110
IPR015856ABC transporter, CbiO/EcfA subunitCDDcd03225ABC_cobalt_CbiO_domain1coord: 1..171
e-value: 1.27614E-41
score: 141.065

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000062_piloncontigtig00000062_pilon:69459..70803 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7017.t1Ggra7017.t1Gracilaria gracilis GNS1m malemRNAtig00000062_pilon 69459..70803 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7017.t1 ID=Ggra7017.t1|Name=Ggra7017.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=302bp
MILGHNGSGKSTLLRILRGLLNPSTGDVFLGKPCAYVQQDPNLQILLPTI
GTDIASSVPRNSETQPLEVRNAVMSALTAVGLTPPEEFFPKSSYRLSGGQ
RQRAAIAAALAMEPRTILFDEVTASMDPFNKAELVSRIRQIVTERHMAAI
WVTHLLDELEFADNIVIMTNGSVVAQGPRVAMMPLVFDLQDEIETSKAFN
FAAVANKVLSVSELGLRMKLKRSRILFMRTGTVPGYSLPSIAADAIKLRD
CVESGPMIGYQTMHTPLHVHMVEAINANLCFKEKKGFRIDSFDLIPRHGV
M*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR027417P-loop_NTPase
IPR003439ABC_transporter-like_ATP-bd
IPR017871ABC_transporter-like_CS
IPR015856ABC_transpr_CbiO/EcfA_su