Ggra6949.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6949.t1
Unique NameGgra6949.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length211
Homology
BLAST of Ggra6949.t1 vs. uniprot
Match: A0A2V3IEP7 (NAD(P)-bd_dom domain-containing protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEP7_9FLOR)

HSP 1 Score: 313 bits (803), Expect = 1.730e-106
Identity = 153/210 (72.86%), Postives = 184/210 (87.62%), Query Frame = 0
Query:    1 MRITVFGANGQTGTEIVDQLVQSGHTVTAAVRRPSTVQPREGVDVCKIDLSDEESILAALKGSDAVISALGTGALRSARKRTSLYSDAVRALRSAMRQLGMKRIIVLSSSGVDEEDKAPAFYNSIIRRYLMNTYIDMARMETILTESDDLEWTNVRLSYLVDCKSQPYIVRDKMLDEGNYKIGFKDAADFIAREMLERKWIQKMPALTYP 210
            M +TVFGANGQTG EIV QL+Q GHTVTAAVRRPSTVQP +GV VCK+DLSD+ S+LAA++GSDAVISALG+GALRSARK+TSLYSD+ RA+R+A+RQL +K++IVLSSSGVDEE+ AP FYN IIRR+LMNTYIDM RMETIL+ESDDLEWT+VRLSYLV+C S+PY V D  +D   ++IGFKDAADF+A E+ ERKW++KM  + YP
Sbjct:    1 MHVTVFGANGQTGHEIVKQLLQRGHTVTAAVRRPSTVQPLDGVTVCKVDLSDQPSVLAAVQGSDAVISALGSGALRSARKKTSLYSDSARAIRAAVRQLDVKKLIVLSSSGVDEEENAPFFYNCIIRRFLMNTYIDMVRMETILSESDDLEWTSVRLSYLVECGSKPYKVYDTSIDSSTFRIGFKDAADFVANEVKERKWMRKMATIAYP 210          
BLAST of Ggra6949.t1 vs. uniprot
Match: A0A1L9BQ32 (NAD(P)-bd_dom domain-containing protein n=2 Tax=Paracoccus sp. SM22M-07 TaxID=1520813 RepID=A0A1L9BQ32_9RHOB)

HSP 1 Score: 227 bits (578), Expect = 5.820e-72
Identity = 118/209 (56.46%), Postives = 149/209 (71.29%), Query Frame = 0
Query:    1 MRITVFGANGQTGTEIVDQLVQSGHTVTAAVRRPSTVQPREGVDVCKIDLSDEESILAALKGSDAVISALGTGALRSARKRTSLYSDAVRALRSAMRQLGMKRIIVLSSSGVDEEDKAPAFYNSIIRRYLMNTYIDMARMETILTESDDLEWTNVRLSYLVDCKSQPYIVRDKMLDEGNYKIGFKDAADFIAREMLERKWIQKMPALTY 209
            MRI V GANG  G EIV Q + +GH V  AVRRP T+   +GV+V KIDLS+ E++  A++G+DAVISALG G L S+ K T+LYSDA RA+R AMRQ G+KRI+VLSS G  +   APAFY+  +RR L+NTY DMARME IL ES DL+WT VRL+YL+   S+P++V +  L  GN+KI   DAA F+  E+ ERKWI+  P L Y
Sbjct:    8 MRIVVVGANGSVGQEIVTQALAAGHNVVGAVRRPETLSHIKGVEVAKIDLSNPETLTIAMQGADAVISALGHGGLGSSMKFTTLYSDATRAIRQAMRQTGVKRIMVLSSGGTVDNPNAPAFYSKFLRRLLINTYTDMARMEAILEESGDLDWTVVRLTYLLKGPSKPFLVEEGKLSRGNFKIHTCDAARFVVGELNERKWIKAHPVLGY 216          
BLAST of Ggra6949.t1 vs. uniprot
Match: A0A8H9J2B3 (NADH-flavin reductase n=1 Tax=Amycolatopsis bartoniae TaxID=941986 RepID=A0A8H9J2B3_9PSEU)

HSP 1 Score: 134 bits (338), Expect = 4.380e-36
Identity = 85/209 (40.67%), Postives = 124/209 (59.33%), Query Frame = 0
Query:    2 RITVFGANGQTGTEIVDQLVQSGHTVTAAVRRPSTVQPREGVDVCKIDLSDEESILAALKGSDAVISALGTGALRSARKRTSLYSDAVRALRSAMRQLGMKRIIVLSSSGVDEEDKAPAFYNSIIRRYLMNT-YIDMARMETILTESDDLEWTNVRLSYLVDCK-SQPYIVRDKMLDEGNYKIGFKDAADFIAREMLERKWIQKMPALT 208
            RI VFGA G+TG  +V++ +++GH VTAAVRRP  +      +V + D+ D ES+ AA KG DAV+SA+G     + RK   LYS A R   +A+ + G+ R++VLSS+GV  +D A A +  ++ R L+N  Y DM  ME+IL ES  L+WT+VR + + D + +  Y V D     G  +I   D A FI   + E +W++  P L 
Sbjct:    3 RILVFGAAGRTGQVVVEEALRAGHEVTAAVRRPRDLP----CEVVRADVLDVESVRAAAKGHDAVVSAIGP----AGRKAAGLYSGAARTFTAALPEAGVSRLVVLSSAGVRHDDPAFALWYRVVARTLLNELYGDMREMESILREST-LDWTSVRPARITDDEPTGDYRVGDGATPAGGREIPRADLARFILGALDEPRWVRSAPTLA 202          
BLAST of Ggra6949.t1 vs. uniprot
Match: SDR family oxidoreductase n=1 Tax=Fibrella sp. HMF5036 TaxID=2817059 RepID=UPI001A93DD32 (SDR family oxidoreductase n=1 Tax=Fibrella sp. HMF5036 TaxID=2817059 RepID=UPI001A93DD32)

HSP 1 Score: 127 bits (318), Expect = 5.560e-33
Identity = 77/215 (35.81%), Postives = 122/215 (56.74%), Query Frame = 0
Query:    1 MRITVFGANGQTGTEIVDQLVQSGHTVTAAVRRPSTVQPREGVDVCKI--DLSDEESILAALKGSDAVISALGTGALRSARKRTSLYSDAVRALRSAMRQLGMKRIIVLSSSGVDEED---KAPAFYNSIIRRYLMNTYIDMARMETILTESDDLEWTNVRLSYLVDCK-SQPYIVRDKMLDEGNYKIGFKDAADFIAREMLERKWIQKMPALTY 209
            M + +FGA G TG  ++  L+Q+GH VTA  R P+ +   +     ++  D+ D  +    L+G D V+S LGTG   S+ K T +YS   +A+  AMRQ  +K++I ++S GV E+D   +   FY  +   +L + Y DM R E +L++S D++W  VR +YLV+   +  Y VR+    EG +KI   D ADFI +++   ++I K P + Y
Sbjct:    1 MHVFIFGATGPTGQLVLSNLLQAGHQVTALARNPAKLVAPDSPRFQRLQGDVMDPLTYQEQLRGIDVVVSLLGTG---SSTKPTRIYSAGGQAIVQAMRQADVKKLITITSGGVQEDDPTIQRSFFYKYVGLWWLRHIYADMKRWEALLSQSIDVDWICVRPTYLVNGPLTGVYRVRETYSPEGGWKISRTDLADFITKQIASSQYIHKKPVIGY 212          
BLAST of Ggra6949.t1 vs. uniprot
Match: A0A2D0N1H0 (NAD(P)-bd_dom domain-containing protein n=1 Tax=Flavilitoribacter nigricans DSM 23189 = NBRC 102662 TaxID=1122177 RepID=A0A2D0N1H0_9BACT)

HSP 1 Score: 125 bits (315), Expect = 1.740e-32
Identity = 80/219 (36.53%), Postives = 125/219 (57.08%), Query Frame = 0
Query:    1 MRITVFGANGQTGTEIVDQLVQSGHTVTAAVRRPSTV------QPREG-VDVCKIDLSDEESILAALKGSDAVISALGTGALRSARKRTSLYSDAVRALRSAMRQLGMKRIIVLSSSGVDEEDKAPA--FYNSIIRRYLMNTYIDMARMETILTESDDLEWTNVRLSYLVDCK-SQPYIVRDKMLDEGNYKIGFKDAADFIAREMLERKWIQKMPALTY 209
            M++ + GA G TG E++ QLVQ G+ V A VR P+++      Q + G ++V +  + + E + A L+G D VISALGTG      + T +YS+  R + +AMR  G+KR+I ++S  +D  D      F N IIR      Y D  R ETIL +++D++WT VR +YL +   +  Y V+D+   EG  KI   D A F+ +++   ++I++ P L Y
Sbjct:    1 MKVFLLGATGSTGYEVLKQLVQDGYAVKALVRDPTSLSLSELEQSQNGQIEVIQGGIFEPEKLKAHLEGCDVVISALGTG---RDNRYTEVYSEGGRNILAAMRANGIKRLITVTSGLIDMSDPGTDNFFLNRIIRPNFNKVYYDQTRWETILDDTNDIDWTCVRPTYLTNKSFTGKYRVKDQHCPEGGRKISRADLAHFMVQQIDSGEFIRRKPVLAY 216          
BLAST of Ggra6949.t1 vs. uniprot
Match: A0A7V4YTJ2 (SDR family oxidoreductase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7V4YTJ2_9BACT)

HSP 1 Score: 124 bits (311), Expect = 6.190e-32
Identity = 75/217 (34.56%), Postives = 120/217 (55.30%), Query Frame = 0
Query:    1 MRITVFGANGQTGTEIVDQLVQSGHTVTAAVRRPSTVQPREG--VDVCKIDLSDEESILAALKGSDAVISALGTGALRSARKRTSLYSDAVRALRSAMRQLGMKRIIVLSSSGVDEEDKAPAFYNSIIRRY-----LMNTYIDMARMETILTESDDLEWTNVRLSYLVD-CKSQPYIVRDKMLDEGNYKIGFKDAADFIAREMLERKWIQKMPALTY 209
            M++ +FGA G TG  ++  L+Q+ H VTA VR P          + + K D+   E+   AL G D VIS LGTG   ++ + T++YS+  + + + MR+ G+K++I L+S GV ++D  P    S   RY     L + Y DM R E +L ++ D++W  +R +YL     +  Y VRD    EG +KI   D ADFI +++ + +++ K P + Y
Sbjct:    1 MKVFLFGATGATGQLLLQNLLQAEHCVTALVRNPDAFIAIHNPLLSLVKGDVFRPETFAEALSGCDVVISTLGTG---NSTRPTTIYSEGGQNILAEMRRAGVKKLITLTSGGVQDDD--PVIQKSFFYRYVGLWWLRHVYRDMKRWEALLNQTTDVDWVCIRPTYLRHGAFTGQYRVRDTYAPEGGWKISRADLADFITKQITDNQFVHKKPVVAY 212          
BLAST of Ggra6949.t1 vs. uniprot
Match: A0A318KDD4 (Putative NADH-flavin reductase n=1 Tax=Nocardia tenerifensis TaxID=228006 RepID=A0A318KDD4_9NOCA)

HSP 1 Score: 120 bits (302), Expect = 1.230e-30
Identity = 78/215 (36.28%), Postives = 117/215 (54.42%), Query Frame = 0
Query:    2 RITVFGANGQTGTEIVDQLVQSGHTVTAAVRRPSTVQPREG-VDVCKIDLSDEESILAALKGSDAVISALGTGALRSARKRTSLYSDAVRALRSAMRQLGMKRIIVLSSSGVDEED-KAPAFYNSIIRRYLMNTYIDMARMETILTESDDLEWTNVRLSYLVD------CKSQPYIVRDKMLDEGNYKIGFKDAADFIAREMLERKWIQKMPALT 208
            ++  FGA G+ G  IV + + +GH VTAAVR P+ + P +  + V + D+ D +S+ AA+ G D V+SA+G     + R    LYSDA RA+ SAMR  G+ R+I ++SSGV  +D   P +Y  + R  +   Y DM  ME+++ ES   +WT VR + L D      C+     V+D     G +K+   D A FI  E+ + +W    P L 
Sbjct:    3 KVIAFGAAGRAGRVIVTEAMNAGHDVTAAVRTPAKLAPHDPRLTVVRADVRDPDSVRAAIAGHDVVVSAIGP----AGRHAEGLYSDAARAMVSAMRATGVHRLIAITSSGVRRDDPNHPLWYRMVARTLMNELYGDMRLMESLVRESVT-DWTFVRPARLTDDPPTGNCR-----VQDGENPSGGWKVPTIDLARFIVAELDDHRWSHAAPTLA 207          
BLAST of Ggra6949.t1 vs. uniprot
Match: A0A1M6ZKQ7 (Putative NADH-flavin reductase n=1 Tax=Pseudonocardia thermophila TaxID=1848 RepID=A0A1M6ZKQ7_PSETH)

HSP 1 Score: 120 bits (301), Expect = 1.780e-30
Identity = 80/214 (37.38%), Postives = 120/214 (56.07%), Query Frame = 0
Query:    1 MRITVFGANGQTGTEIVDQLVQSGHTVTAAVRRPS-TVQPREGVDVCKIDLSDEESILAALKGSDAVISALGTGALRSARKRTSLYSDAVRALRSAMRQLGMKRIIVLSSSG--VDEEDK--APAFYNSIIRRYLMNTYIDMARMETILTESDDLEWTNVRLSYLVDCKSQPYIVRDKMLDEGNYKIGFKDAADFIAREMLERKWIQKMPALTY 209
            MRITVFGA G TG ++V Q + +GH VTA VR  +  ++    +DV   D+ D ++I  A+KG+DAV+SALG      +R+ T++ S   RA+ +AM   G +R++V+++SG  VDE D     A    ++RRYL  ++ D AR + I+ +S  L+WT +R   L D +S+PY         G + I   D A  I   + +R  I    AL Y
Sbjct:    1 MRITVFGATGGTGRQVVRQALDAGHQVTAVVRNAAGLIEQHPALDVVTADVMDPDAITPAVKGADAVVSALGP----RSREETTVCSSGARAIVAAMHAAGTRRLVVVTASGHVVDEGDGPVTRAVVKPLLRRYLRGSFADFARTDRIVQDSG-LDWTIMRPPRLTDGRSRPYRTAIDRNVRGGFTIARADLARAILVALADRAAIGHSIALGY 209          
BLAST of Ggra6949.t1 vs. uniprot
Match: SDR family oxidoreductase n=1 Tax=Sinomonas albida TaxID=369942 RepID=UPI0010A77855 (SDR family oxidoreductase n=1 Tax=Sinomonas albida TaxID=369942 RepID=UPI0010A77855)

HSP 1 Score: 116 bits (291), Expect = 5.520e-29
Identity = 78/199 (39.20%), Postives = 114/199 (57.29%), Query Frame = 0
Query:    1 MRITVFGANGQTGTEIVDQLVQSGHTVTAAVRRPSTVQPREGVDVCKIDLSDEESILAALKGSDAVISALGTGALRSARKRTSLYSDAVRALRSAMRQLGMKRIIVLSSSGV--DEEDKAPAFY--NSIIRRYLMNTYIDMARMETILTESDDLEWTNVRLSYLVDCKSQPYIVRDKMLDEGNYKIGFKDAADFIAREM 195
            M++TVFGA G TG E+V Q   +GH VTA VR P+ +    GV V + D+ D   I +AL G+DAV+SALG    R  R+ T++ S  V ++ +AM+  G++R+ V+S+SG+  D+ D     Y    I++R L + + D+ RME I+ ES  L+WT VR S L+D     Y V+      G       D AD+I R +
Sbjct:    1 MKLTVFGATGGTGREVVRQASAAGHEVTAVVRDPARLAAVPGVAVVRADVMDPAGIASALAGADAVVSALGN---REIRRPTTVCSAGVSSIIAAMKGAGVRRLAVVSASGMVTDDADDLLTRYVAKPILQRILAHNFADLKRMEQIVRESG-LDWTIVRPSRLLDGPQGEYRVQIGRNLRGGRATRRADLADYILRSL 195          
BLAST of Ggra6949.t1 vs. uniprot
Match: SDR family oxidoreductase n=1 Tax=Streptomyces sp. NRRL F-5727 TaxID=1463871 RepID=UPI0004C67431 (SDR family oxidoreductase n=1 Tax=Streptomyces sp. NRRL F-5727 TaxID=1463871 RepID=UPI0004C67431)

HSP 1 Score: 116 bits (291), Expect = 6.120e-29
Identity = 80/218 (36.70%), Postives = 118/218 (54.13%), Query Frame = 0
Query:    1 MRITVFGANGQTGTEIVDQLVQSGHTVTAAVRRPSTVQPREG-----VDVCKIDLSDEESILAALKGSDAVISALGTGALRSARKRTSLYSDAVRALRSAMRQLGMKRIIVLSSSG--VDEEDK--APAFYNSIIRRYLMNTYIDMARMETILTESDDLEWTNVRLSYLVDCKSQPYIVRDKMLDEGNYKIGFKDAADFIAREMLERKWIQKMPALTY 209
            MRITV GA G TG ++V+Q + +GH VTA VR PS ++ R+G     +DV   D+ D E++ AA+ G DAV+SALG+    + R   S+ SD  R++ +AMR  G +R+IV+++SG  VDE D     A    ++RR L   + D AR + I+ +S  L+WT +R   L D   +PY         G   +   D A  I   + E   ++    L Y
Sbjct:    1 MRITVLGATGGTGRQLVEQALDAGHHVTAVVRDPSRLRLRQGADAPRLDVLTADVMDPEAMTAAVAGRDAVVSALGS----APRTEASVCSDGARSVIAAMRTTGTRRLIVVTASGHVVDEGDGPFTRALVKPVVRRVLAGNFADFARTDRIVRDSG-LDWTIMRPPRLTDGAPRPYRTATDRNVRGGITLARADLARAILAALAEPGSVRHTIGLGY 213          
The following BLAST results are available for this feature:
BLAST of Ggra6949.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IEP71.730e-10672.86NAD(P)-bd_dom domain-containing protein n=3 Tax=Gr... [more]
A0A1L9BQ325.820e-7256.46NAD(P)-bd_dom domain-containing protein n=2 Tax=Pa... [more]
A0A8H9J2B34.380e-3640.67NADH-flavin reductase n=1 Tax=Amycolatopsis barton... [more]
SDR family oxidoreductase n=1 Tax=Fibrella sp. HMF5036 TaxID=2817059 RepID=UPI001A93DD325.560e-3335.81SDR family oxidoreductase n=1 Tax=Fibrella sp. HMF... [more]
A0A2D0N1H01.740e-3236.53NAD(P)-bd_dom domain-containing protein n=1 Tax=Fl... [more]
A0A7V4YTJ26.190e-3234.56SDR family oxidoreductase n=1 Tax=Bacteroidetes ba... [more]
A0A318KDD41.230e-3036.28Putative NADH-flavin reductase n=1 Tax=Nocardia te... [more]
A0A1M6ZKQ71.780e-3037.38Putative NADH-flavin reductase n=1 Tax=Pseudonocar... [more]
SDR family oxidoreductase n=1 Tax=Sinomonas albida TaxID=369942 RepID=UPI0010A778555.520e-2939.20SDR family oxidoreductase n=1 Tax=Sinomonas albida... [more]
SDR family oxidoreductase n=1 Tax=Streptomyces sp. NRRL F-5727 TaxID=1463871 RepID=UPI0004C674316.120e-2936.70SDR family oxidoreductase n=1 Tax=Streptomyces sp.... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016040NAD(P)-binding domainPFAMPF13460NAD_binding_10coord: 7..194
e-value: 2.8E-37
score: 128.4
NoneNo IPR availableGENE3D3.40.50.720coord: 1..208
e-value: 8.0E-40
score: 138.6
NoneNo IPR availablePANTHERPTHR43355FLAVIN REDUCTASE (NADPH)coord: 1..209
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 1..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000115_piloncontigtig00000115_pilon:284000..284632 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6949.t1Ggra6949.t1Gracilaria gracilis GNS1m malemRNAtig00000115_pilon 284000..284632 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6949.t1 ID=Ggra6949.t1|Name=Ggra6949.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=211bp
MRITVFGANGQTGTEIVDQLVQSGHTVTAAVRRPSTVQPREGVDVCKIDL
SDEESILAALKGSDAVISALGTGALRSARKRTSLYSDAVRALRSAMRQLG
MKRIIVLSSSGVDEEDKAPAFYNSIIRRYLMNTYIDMARMETILTESDDL
EWTNVRLSYLVDCKSQPYIVRDKMLDEGNYKIGFKDAADFIAREMLERKW
IQKMPALTYP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016040NAD(P)-bd_dom
IPR036291NAD(P)-bd_dom_sf