Ggra6865.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra6865.t1
Unique Name	Ggra6865.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	443

Homology

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BLAST of Ggra6865.t1 vs. uniprot
Match: A0A2V3J660 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J660_9FLOR)

HSP 1 Score: 314 bits (805), Expect = 1.810e-99
Identity = 186/446 (41.70%), Postives = 266/446 (59.64%), Query Frame = 0

Query:    1 MDFVDYGWLSKEHVVHT--SNCVRSTIFLATRSECGYFRDATTSETISDRDALSETFSHACSVDRFNSSFE--YPELVSG-DYIVMVCE-NWPPAESMPPVVMARESRKILVVQQEDVTLYLSHCMRGLLHKPKRAAACVIPLESTLDNLNVFNLLERSAPIWHRLGNWAAYDDCSSHGTTDKLGITTCIRIAQFMNTISSGNRINLTETKSLKHIYVNTAALKMF-----RLSQDALYTGMDALKLLHIATNEMHGCPPEQYVEVDKGVCQGIDTEFRKTKDLAKRLENIEYHPQGAKSSRKFIYRLLAWGYVVLTVVLALIVAVLNVASRDNVFERLTDMVAVLTTMLVTVFGLLKLTSEDPNAIRNTLRGFKILHYFEEVMREIECNDVEEFRRALSVGAVDADWLDREGSCYADLSRSGNIRDSIGSTLGELISAGWFFSKY 435
            MD +DY  +  +    +  S    ++ +L T++E   F   T S+   D      +F+  C V +F+   +  + +   G  Y   V   +WPP       V+A E +KIL+++ EDV  Y+S  ++  LHKP+R AA   P +        +  L+ S  ++HRLGNW AYDDC  H  TD+ GI + +R A+F +TISS + IN+     L+  ++ TAAL +      R   +    G+    +L+ A N+MHGC  +++V  D G    I  E  K + L + L++I+YH +GA  S    +++ AW Y+   ++ AL+ A LN+ASRDN+FER TDM AVLTT+LV+VFGLLKL SEDPN IRNTLRGFK+L +FE+V+RE++C+D    R  LSVGA D DWLDREGSCYA   RSG IRD++G+ LGEL  AGWFFS++
Sbjct:    1 MDVIDYFVIQGDPANQSAASRPSETSAYLFTQAE---FEKYTRSDNFYD------SFNRRCPVVQFSPDMDEDHVKFPRGYTYTAAVTHASWPPGVE----VLASEQQKILMIKGEDVGEYISFLIKATLHKPRRVAAVCKPEKPR----ETYEALQTSGVVFHRLGNWRAYDDCEEHRDTDRSGIISRVRSAEFASTISSKHTINVGGNGFLQKNFMCTAALTLILKEKNRTKGEKTGAGITRELVLN-ALNDMHGCKIDKFVATDVGE---IGREVSKMRSLIENLKSIKYHTEGAMVSTGLFWKISAWTYITGVILAALLTAALNIASRDNLFERFTDMAAVLTTLLVSVFGLLKLKSEDPNVIRNTLRGFKVLRHFEDVVREVKCDDEAYLRMVLSVGAADVDWLDREGSCYALTQRSGRIRDTVGAKLGELTRAGWFFSEH 425

The following BLAST results are available for this feature:

BLAST of Ggra6865.t1 vs. uniprot

BLAST of Ggra6865.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J660	1.810e-99	41.70	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 331..348
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..296
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 320..330
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 349..442
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 297..319
None	No IPR available	TMHMM	TMhelix		coord: 297..319

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000056_pilon	contig	tig00000056_pilon:712100..713428 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra6865.t1	Ggra6865.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000056_pilon 712100..713428 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra6865.t1 ID=Ggra6865.t1|Name=Ggra6865.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=443bp
MDFVDYGWLSKEHVVHTSNCVRSTIFLATRSECGYFRDATTSETISDRDA
LSETFSHACSVDRFNSSFEYPELVSGDYIVMVCENWPPAESMPPVVMARE
SRKILVVQQEDVTLYLSHCMRGLLHKPKRAAACVIPLESTLDNLNVFNLL
ERSAPIWHRLGNWAAYDDCSSHGTTDKLGITTCIRIAQFMNTISSGNRIN
LTETKSLKHIYVNTAALKMFRLSQDALYTGMDALKLLHIATNEMHGCPPE
QYVEVDKGVCQGIDTEFRKTKDLAKRLENIEYHPQGAKSSRKFIYRLLAW
GYVVLTVVLALIVAVLNVASRDNVFERLTDMVAVLTTMLVTVFGLLKLTS
EDPNAIRNTLRGFKILHYFEEVMREIECNDVEEFRRALSVGAVDADWLDR
EGSCYADLSRSGNIRDSIGSTLGELISAGWFFSKYRRTMHTI*