Ggra6845.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6845.t1
Unique NameGgra6845.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length645
Homology
BLAST of Ggra6845.t1 vs. uniprot
Match: A0A2V3IPY8 (E3 ubiquitin-protein ligase RFWD3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPY8_9FLOR)

HSP 1 Score: 639 bits (1648), Expect = 2.400e-221
Identity = 329/572 (57.52%), Postives = 418/572 (73.08%), Query Frame = 0
Query:   74 NEDEERHESGSVVTVRSSQGSEEPSPSPVIKRRRKSKSLPGPEVEKKNETPSEEDGGNCCTICLDPWASSGPHQVCCMPCGHLFGYSCIKEWIRGGNSRKRECPTCKTPARVKDLRYLFGLPSRLAVSDVSEIQRLRDELKREKISHETTKIKYQETKKLAKIYREEMRNLQRHGKSSVQTFGHQNDSQRVETVDNVRLVSIYRTAGASLAVAVDEDASYLFNERVPGDGPRHRVGRIDIGRPNVPIHSPHTTDKRVNCIKVCRHTCGAVYRHIAVASTDYSVAILTPNLQRALTLRVP-GIPLSCSWLSSRPHLAAVGLVSGEVLMYDIRHTSTHLYESVLSRNQGSRAVHSLEEVKVDDSQNSSAVLAASPHGVFGISFDGYMGAPNVYEVKGGAPEDWAPTSFTVSGNMIAVAARRRGLTNCGSQEMGCSLLMHRGIVREGLDLKFGLSLGEPVYTSSQNVPFVYCGIVGGKDDDLDTMLAYPDKNAQDKLSVWAYKRDAYDGASSWKEQEVLSDSQSQTQGLGNGDVRAAAGFRLPRSAKINGVPDGTRGIFVTVGGDVIRVFAAGKY 644
            +E + R+E  SV++VRSS GSE+ S SP+IKRRR  + L    VE  N   S++DG NCCTICL+ W+++GPHQVCCMPCGHLFGY CIKEWI G NSR+R CPTCK PARVKDLRYLFGLPSRL  SDVSE+QRLR++L +EK SHE TK+K +ETK+LAK YR E+++LQRH KSS+QTFG++      +    VRL+S+Y+T GAS++VA+D+DA+YLFNERV   G RHR+GR+DIGRP   +HSPHT +KRVN I++CR T  A +RHI++ASTD  V IL  NLQ A T+  P  IPLS  WLS RP+L AVG+VSGEV +YD+R T T LY  +LSR+QG+RAVHSL EV    ++N+  VLAASP G++G+ FDGY+  P V+ + G A E  AP+S TVS N+IAVAA+ R      SQ++G SL +H+G+ ++G D++ G +LG+ +Y + Q VPF + G+V G DD   T+LAYPDK A+DKLS W YK+   +    W EQEV S            DVRAA G RLPR ++I GVP+ TRGIFVTVG DV+RVFAAGKY
Sbjct:   65 HEPQPRNEETSVISVRSSDGSEDSSQSPLIKRRRVKRDLKTRTVENVNGEDSQDDG-NCCTICLERWSNTGPHQVCCMPCGHLFGYKCIKEWILGSNSRRRACPTCKVPARVKDLRYLFGLPSRLEASDVSEVQRLREQLTKEKTSHERTKMKLEETKRLAKTYRAEIKSLQRHKKSSIQTFGNEKPPDNDDCSTAVRLISVYKTLGASVSVALDQDATYLFNERVSPAGTRHRIGRVDIGRPQTALHSPHTIEKRVNSIEICRDTSRADFRHISIASTDCKVYILASNLQHATTISTPRSIPLSSRWLSCRPNLIAVGMVSGEVFIYDVRQTVTALYGCMLSRDQGARAVHSLHEVY---AENTPVVLAASPLGIYGLVFDGYVDRPTVHPINGLA-ESLAPSSLTVSDNIIAVAAKGRSNGLVSSQQLGSSLSVHKGLSKQGPDIRLGDALGDQIYGNLQTVPFAFGGLVRGADDYAGTILAYPDKLAKDKLSAWTYKKGT-NATGRWTEQEVQSQGDGCNSLDSVADVRAAVGIRLPRHSRIRGVPEKTRGIFVTVGNDVVRVFAAGKY 630          
BLAST of Ggra6845.t1 vs. uniprot
Match: R7Q3D2 (RING-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3D2_CHOCR)

HSP 1 Score: 323 bits (828), Expect = 1.720e-98
Identity = 215/597 (36.01%), Postives = 312/597 (52.26%), Query Frame = 0
Query:   51 EEHIEPPLHPQTMPRVGSIQLIRNEDEERHESGSVVTVRSSQGSEEPSPSPVIKRRRKSKSLPGPEVEKKNETPSE-EDGGNCCTICLDPWASSGPHQVCCMPCGHLFGYSCIKEWIRGGNSRKRECPTCKTPARVKDLRYLFGLPSRLAVSDVSEIQRLRDELKREKISHETTKIKYQETKKLAKIYREEMRNLQRHGKSSVQTFGHQNDSQRVETVDNVRLVSIYRTAGASLAVAVDEDASYLFNERVPGD-GPRHRVGRIDIGRPNVPIHSPHTTDKRVNCIKVCRHTCGAVYRHIAVASTDYSVAILTPNLQRALTLRVPGIPLSCSWLSSRPHLAAVGLVSGEVLMYDIRHTSTHLYESVLSRNQGSRAVHSLEEVKVDDSQNSSAVLAASPHGVFGISF-DGYMGAPNVYEVKGGAPEDWAPTSFTVSGNMIAVAARRRGLTNCGSQEMGCSLLMHRGIV-REGLDLKFGLSLGEPVYTSSQNVPFVYCGIVGGKDDDLDTMLAYPDKNAQDKLSVWAYKRDAYDGASSWKEQEVLSDSQSQTQGLGNGDVRAAAGFRLPRSAKINGVPDGTRGIFVTVGGDVIRVFAAGK 643
            EE   P   P    RV  +Q+  N D        +V   +   S    PSP   +R          V K+  TPS+  D  N C ICL+ W S+GPHQ+CC+PCGHLFGY+CI++W+ G + R R+CP CKT AR+KDLRY+FG+ +RLA +D SEIQ L+  +++E  SHE TK+K +ET+++A     EM+ L++     V TFG        +   +  L++   T G ++AVA D ++  LF ER+ G      R+ R+DIGR  +   S    ++RVN I V        +R +AVA     + IL PNL  A  +      LS +WL  +P+   VG V G+VL YD+R+ +     SV     G+R VHS+ E  V+D      +LA +P G+FG+ + +G   AP V +      E  +  S  V   +IAV++RRR        E   S+L++ G+  RE     F  ++G+P+   SQ +PF   G++GG D     M+   D+NA+ K+ +W   R      S WK  E+  +  S+        VRA A  RLPR A+++ VP GT  +F  V    IR+FAAG 
Sbjct:   55 EESDAPAATPAQSERVSPLQVDENAD-------VIVVSGAHPRSPVRQPSPTSPKR----------VPKRPFTPSQPSDDDNLCIICLENWTSAGPHQICCLPCGHLFGYACIRQWL-GRSRRGRQCPNCKTSARIKDLRYIFGVSTRLAATDTSEIQSLQKRIRQETESHEYTKLKLKETRRIADQAIREMKELRKRVPKPVPTFGGTRGGP-AKCTRHPTLLADCNTNGDTVAVAFDNNSGVLFGERMSGSVAVSQRLSRLDIGRCAIAQSSRAVGNRRVNAIAVDTRPSSPSHRSVAVADAGRKLTILAPNLNLAANVDCGSSLLSATWLERKPNCVVVGAVDGKVLTYDVRNLAGGQLSSVQLAFGGARGVHSVRECTVNDDL---VLLAGTPSGLFGVRYSEGLFTAPIVSDFYCADLEGASICSVAVDAGLIAVSSRRRV-----DGEWKSSILLNEGLRWREDGKFTFSATVGKPLQGHSQTLPFEQVGVLGGGDGG-QPMVVAADRNAKGKVRMWNTNR--LGSGSQWKTFEIEQNYDSE-----GATVRACAAQRLPRRARLDKVPKGTEALFACVTYGSIRLFAAGS 616          
BLAST of Ggra6845.t1 vs. uniprot
Match: A0A251SEM2 (Putative transducin/WD40 repeat-like superfamily protein n=2 Tax=Helianthus annuus TaxID=4232 RepID=A0A251SEM2_HELAN)

HSP 1 Score: 109 bits (272), Expect = 2.280e-21
Identity = 95/347 (27.38%), Postives = 151/347 (43.52%), Query Frame = 0
Query:  130 GNCCTICLDPWASSGPHQVCCMPCGHLFGYSCIKEWIRGGNSRKRECPTCKTPARVKDLRYLFGLPSRLAVSDVS-EIQRLR------------------DELKREKISHETTKIKYQETKKLAKIYREEMRNLQRHGKSSVQTFGHQNDSQRVETVDNVRLVSIYRTAGASLAVAVDEDAS---YLFNERVPGDGPRHRVGRIDIGRPNV--PIHSP-HTTDKRVNCIKVCRHTC--GAVYRHIAVASTDYSVAILTPNLQRALTLRVPGIPLSCSWLSSRPHLAAVGLVSGEVLMYDIRHTSTHLYESV-LSRNQGSRAVHSLEEVKVDDSQNSSAVLAASPHGV 448
            G CC IC +PW + G HQ+ C+PCGH++G SCIK+WI+   SR  +CP C      KD+R L+     +  ++V  ++Q L                   +  KRE   H       ++TK L ++ ++  R          +   + N S  V       L   ++  G       D DAS    +   R  G G    + +I +  PN    IH P +T   R  C++ C       ++ + +++ ST+ +  ++T +L        P    SCSW    P+    GL +G V+ +D R T   L   + LS N     VH+L  V  D S  ++ +L+AS  G+
Sbjct:   68 GLCCPICTEPWTTGGLHQISCLPCGHIYGLSCIKKWIQQ-RSRSAKCPQCNKKCTRKDVRVLYAEQLHVVDAEVQKQVQSLEAKCASLEQKNAVCCKKEVEAQKREADLHLKVAKLTEKTKYLERLLKDRQREPFASNPGYQRRVINGNGSGNVFCPGAFTLQREFQVDGGRY---FDIDASGQLMIVARRQNGTGGTSILSKISLLAPNEREDIHLPAYTKAVRALCVRPCTRLALVASLGKKLSIVSTESNNTVVTYDL--------PASAWSCSWDVDSPYHVYTGLQNGMVMSFDTRQTKEPLETRIGLSCNP----VHTLISVAPDSSSGTTTLLSASQIGI 398          
BLAST of Ggra6845.t1 vs. uniprot
Match: E3 ubiquitin-protein ligase RFWD3-like isoform X1 n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE28383 (E3 ubiquitin-protein ligase RFWD3-like isoform X1 n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE28383)

HSP 1 Score: 105 bits (262), Expect = 4.590e-21
Identity = 91/297 (30.64%), Postives = 132/297 (44.44%), Query Frame = 0
Query:  116 EVEKKNETPSEEDGGNCCTICLDPWASSGPHQVCCMPCGHLFGYSCIKEWIRGGNSRKRECPTCKTPARVKDLRYLFGLPSRLAVSDVS---EIQRLRDELKREKISHETTKIKYQETKKLAKIYREEMRNLQRHGK------SSVQTFGHQNDSQRVETVDNVRLVSIYRTAGASLAVA----VDEDASY---LFNERVPGDGPRHRVGRIDIGRP--NVPIHSPHTTDKRVNCIKVCRHT-CGAVYRHIAVASTDYSVAILTPNLQR-ALTLRVPGIPLSCSWLSSRPHLAAVGL 392
            E +KK E       G CC+IC++PWAS G HQ  C+PCGH++G SCI +WI+  +    +CP C      KD+R LF  P  + V D     +I+ L+ E++  K         +Q  KK A +   E   L   G       SS +++G  N       +    ++         LAV      D DASY   +   R+ G G  H + +I++  P  N  I  P    KR+  IK  R + CG   R   +AS    ++IL+       +   +P    SCSW S+ P     GL
Sbjct:   55 EKKKKKELGESNLDGLCCSICMEPWASHGDHQASCLPCGHVYGMSCIIKWIQQCHGYPAKCPQCNAKCISKDVRKLFASP--VVVHDEGLQKKIESLQTEIRSLKNEDNLLNELHQVKKKQADL---ENATLGGMGSKPLGFFSSKESWGENNRHHIDSNISKQEILPCSFVLQQELAVEGATLFDMDASYQILILARRISGMGGTHMLNKINLICPHENEDIQLP----KRIRAIKDLRVSPCG---RLTLLASLGKKLSILSHGSNELVINYDLPDPAWSCSWDSNNPSYIYAGL 339          
BLAST of Ggra6845.t1 vs. uniprot
Match: A0A4C1ZYU5 (E3 ubiquitin-protein ligase RFWD3 n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1ZYU5_EUMVA)

HSP 1 Score: 107 bits (267), Expect = 9.140e-21
Identity = 93/301 (30.90%), Postives = 143/301 (47.51%), Query Frame = 0
Query:  126 EEDGGNCCTICLDPWASSGPHQVCCMPCGHLFGYSCIKEWIRGGNSRKRECPTCKTPARVKDLRYLFGLPSRLAVSDVSEIQRLRDELK-------REKISHETTKIKYQETKKLAKIYREEMRNLQRHGKSSVQTFGHQNDSQRVETVDNVRL-------VSIYRTAGASLAVAVDEDASYLFNERVPGDGPRHRVGRID--IGRPNVPIHSPHTTDKRVNCIKVCRHTCGAVYRHIAVASTDYSVAILTPNLQRALTLRVPGIPL-SCSWLSSRPHLAAVGLVSGEVLMYDIRHTSTHL 409
            +E  G  C ICLD W+SSG H++  + CGHLFGY C+++W+R   +  R CPTCK+ A +KD+RY++    +L   D SEI  L+ +++       R ++    +KI Y+    L ++Y  E  + +   ++ V      N + R     N+ +       V  Y      L V+  + ++ LF    PG G R +VG ID  +G+        H   K +  I   +         +   S D +  IL  +   +LT++  G PL SC+W         VG V G  L YDIR+TST L
Sbjct:   96 DEQDGETCPICLDSWSSSGDHRLVSLKCGHLFGYRCVEKWLRARKTADRSCPTCKSKAAIKDIRYIYA--KKLVACDTSEITTLQKQVEVLQAEKNRLELELHQSKISYKNC--LQQLYALEQASTRNSARAHVF-----NCNWRFALEKNMEISKEGGCRVLTYNCKRYELLVS-QKSSNNLF----PGFGVR-KVGCIDHRLGQ------FIHLHPKPIRDISYSQPN-----DFLLSVSLDGTAKILDRDAP-SLTIQA-GFPLWSCTWDEMHTQEFVVGGVGGIALRYDIRNTSTPL 368          
BLAST of Ggra6845.t1 vs. uniprot
Match: E3 ubiquitin-protein ligase RFWD3-like n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018D0F55D (E3 ubiquitin-protein ligase RFWD3-like n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018D0F55D)

HSP 1 Score: 107 bits (267), Expect = 1.140e-20
Identity = 114/409 (27.87%), Postives = 173/409 (42.30%), Query Frame = 0
Query:  116 EVEKKNETPS----------EEDGGNCCTICLDPWASSGPHQVCCMPCGHLFGYSCIKEWIRGGNSRKRECPTCKTPARVKDLRYLFGLPSRLAVSDVSEIQRLRDE---LKREKISHETTKIKYQETKKLAKIYREEMRNLQRHGKSSVQTFGHQNDSQRVETVDNVRL-------VSIYRTAGASLAVAVDEDASYLFNERVPGDGPRHRVGRID--IGRPNVPIHSPHTTDKRVNCIKVCRHTCGAVYRHIAVASTDYSVAILTPNLQRALTLRVPGIPL-SCSWLSSRPHLAAVGLVSGEVLMYDIRHTSTHLYE-SVLSRNQGSRAVHSLEEVKVDDSQNSSAVLAASPHGVFGISFDGYMGAPNVYEVKGGAPEDWAPTSFTVSGNMIAVA---ARRRGLTNC 497
            E E  NE P+          EE  G  C ICLD W +SG H++  + CGHLFG  C++ W+R    + R CPTCK+ A V+DLR+++    RL  +D +EI  L+ +   ++ EKI  E    K +   +      E +RN       S Q F  +    R     N+ +       V  Y      L V+  +  + LF    PG G R RV  +D  +G P + +H            K  R    +  + + ++ +    A L      +LT++  G PL SC+W + R H   VG V G ++ YDIR+T + L+  S  S      ++ S E   +    NSS + + S  G                         W P +  V G  +++A      RGL +C
Sbjct:  131 ESEDSNEPPAKMRKISTQSQEEQDGETCPICLDAWGNSGDHRLVALKCGHLFGSKCVERWLRAQAQKDRSCPTCKSKATVRDLRFIYA--RRLVAADTAEITALQKQVEVIQSEKIRAELELQKSKMAHRACIQQLEVLRNTLASSSQSCQRF--ERKGWRFALEKNLEVCKDGGCRVLSYNCRTYDLYVS-QKSTNSLF----PGFGVR-RVSCVDYKLG-PFLFLHP-----------KPIRDIAYSQPKDLLLSVSLDGSARLVERGSASLTIQC-GAPLWSCTWDALRHHELFVGGVGGAIMHYDIRNTGSPLHRLSAPSDMTPVASLCSTEYGLLSCQLNSSWLWSPSTSG------------------------QWEPKALPVDGPFLSMAYDSETHRGLISC 492          
BLAST of Ggra6845.t1 vs. uniprot
Match: E3 ubiquitin-protein ligase RFWD3 n=2 Tax=Ochotona TaxID=9977 RepID=UPI001B34EEF3 (E3 ubiquitin-protein ligase RFWD3 n=2 Tax=Ochotona TaxID=9977 RepID=UPI001B34EEF3)

HSP 1 Score: 107 bits (268), Expect = 1.350e-20
Identity = 86/323 (26.63%), Postives = 140/323 (43.34%), Query Frame = 0
Query:  126 EEDGGNCCTICLDPWASSGPHQVCCMPCGHLFGYSCIKEWIRGGNSRKRECPTCKTPARVKDLRYLFGLPSRLAVSDVSEIQRLRDELKREK-------------------ISHETTKI--KYQETKKLAKIYREEMRNLQRHGKSSVQTFGHQNDSQR-----------VETVDNVRLVSIYRTAGASLAVAVDEDASYLFNERVPGDGPRHRVGRIDIGRPNVPIHSPHTTDKRVNCIKVCRHTCGAVYRHIAVASTDYSVAILTPNLQRALTLRVPGIPLSCSWLSSRPHLAAVGLVSGEVLMYDIRHTSTHLYESVLSR 416
            +++ G+ CTICL+ W ++G H++  + CGHLFGY CI +W++G   + R+CP C   A+  D+  L+     L   D SE ++L+  L +E+                   +++E TK+  + Q+ + L   +RE+   LQ+ G S  Q+ G Q  SQ            V    N R+++   +    +       AS+L     PG G R            +P+HS        N          ++   I + S + +  + T N  R +         SC W          GLVSG +L+YD+R+T  H+ E V  R
Sbjct:  313 DDEEGDTCTICLEQWTNAGEHRLTALRCGHLFGYKCISQWLKG---QVRKCPQCNKKAKHSDIVVLYA--RNLRALDTSEQEQLKSSLLKEQMLRKHAELESAQCRLQLEVLTNECTKLQNRIQDLQTLILQHREQ--TLQQPGGSQAQSLGCQPSSQGQHKYHFEKTFPVSQTGNCRIMAYCDSLSCLVVSQPSPQASFL-----PGFGVRMLSTANMKSTQYIPMHSKQIRGLAFNTRSKGLLLSASLDNTIKLTSLETNTVVQTYNTGRPVW--------SCCWCLDESQYFYAGLVSGSILVYDLRNTRCHVQELVSQR 615          
BLAST of Ggra6845.t1 vs. uniprot
Match: A0A075A668 (RING-type domain-containing protein n=4 Tax=Opisthorchiidae TaxID=6196 RepID=A0A075A668_9TREM)

HSP 1 Score: 106 bits (265), Expect = 1.970e-20
Identity = 85/304 (27.96%), Postives = 139/304 (45.72%), Query Frame = 0
Query:  116 EVEKKNETPSEEDGGNCCTICLDPWASSGPHQVCCMPCGHLFGYSCIKEWIRGGNSRKRECPTCKTPARVKDLRYLFGLPSRLAVSDVSEIQRLRDELKREKISH---ETTKIKYQETKKLAKIYREEMRN--------LQRHGKSSVQTFGHQNDSQRVETV--DNVRLVSIYRTAGASLAVAVDEDASYLFNERVPGDGPRHRVGRIDIGRPNVPIHSPHTTDKRVNCIKVCRHTCGAVYRHIAVASTDYSVAILTPNLQRALTLRVPGIPLSCSWLSSRPHLAAVGLVSGEVLMYDIRHTS 406
            E  K   T   ED  NC  IC +PW S+GPH++CC+ CGHLFG+SC+  WIR    + R CP C + A VKD+RY++     L V D SE  R   +L  E+ +    E    +Y+   +L ++   ++R+         Q  G++  QT  ++   + ++++   N     +  +     A+ V + +S   N    G G R ++  ID      P+   H   + +  +         +    ++  T    ++LT  + +  T + P    SC W S  PH    G  +G V ++DIR TS
Sbjct:   38 EQNKTTNTTIGEDSENC-PICFEPWTSTGPHKLCCLRCGHLFGHSCVLRWIRSQGKQGR-CPQCNSRACVKDIRYIYT--RNLRVLDTSERDRALADLAIERAARRKAEQDSAEYRAKYQLLQVELNQLRDEFHSVRAISQILGRNPTQTSAYRGQYELMKSILLSNTGNCRVMASCDYLNALCVSQPSS---NPIFRGFGIR-KINTID----QRPLKYIHLHGQPIRDVSFHPDAQDGILISASLDKTLRLTSLLTDQVVQ--TYQCPSPVWSCCWASPNPHRLFAGCSNGTVQVFDIRVTS 327          
BLAST of Ggra6845.t1 vs. uniprot
Match: A0A7K5I3J9 (RFWD3 ligase (Fragment) n=1 Tax=Crotophaga sulcirostris TaxID=33598 RepID=A0A7K5I3J9_CROSL)

HSP 1 Score: 106 bits (265), Expect = 2.890e-20
Identity = 95/392 (24.23%), Postives = 175/392 (44.64%), Query Frame = 0
Query:   57 PLHPQTMPRVGSIQLIRNEDEERHESGSVVTVRSSQGSEEPSPSPVIKRRRKSKSLPGPEVEKKNETPSEEDGGNCCTICLDPWASSGPHQVCCMPCGHLFGYSCIKEWIRGGNSRKRECPTCKTPARVKDLRYLFGLPSRLAVSDVSEIQRLRDELKREKISHETTKIKYQETKKLAKIYREEMRNLQR-----------HGKSSVQTFGHQN----------DSQRVETVDNVRLVS--------IYRTAGASLAVAVDEDASYLFNERVPGDGPRHRVGRIDIGRPNVPIHSPHTTDKRVNCIKVCRHTCGAVYRHIAVASTDYSVAILTPNLQRALTLRVPGIPL-SCSWLSSRPHLAAVGLVSGEVLMYDIRHTSTHLYESVLSRNQ 418
            PL P+     GS+     E+  +    ++    +  GS+E   + V +++      P P V      P +E+ G+ C IC + W ++G H++  + CGHLFGY+CI+ W++G   +  +CP C   A+  D+  L+     L   D SE +R++  L++E++     +++  +++   +  R++  NL++           H  S+ Q  G  +           SQR   ++ V +VS         Y  A + L V+     S L    +PG G +            VPIHS     K++  +   R   G +      A+ D ++ + +      +     G P+ SC W     +    GLV+G +++YD+RHT++H+ E V  +++
Sbjct:  194 PLDPEMPAAAGSVSSQVQEEPPQ----ALSQASAEHGSQEGEEAEVQQKQTTPLKKPAPSVPV---APRDEEEGDTCAICFEQWTNAGDHRLSALRCGHLFGYTCIERWLKG---QAGKCPQCNKKAKRSDIVILYA--RTLKALDTSEQERMKSSLEKEQMLRRQAELESAQSRLQLQALRDKCSNLRKQVEELKALVAQHNASASQQPGSNHTCLPGSLPPSQSQRKYQLEKVFVVSQAGNCRVMAYCDALSCLVVSQPSPQSTL----IPGCGVKMMSVANLKSSQYVPIHS-----KQIRGLAFGRRADGLLLS----AALDNTLKLTSLATNTVVQTYNAGRPVWSCCWCLDDTNYIYAGLVNGSIMIYDLRHTNSHVQELVPQKSR 560          
BLAST of Ggra6845.t1 vs. uniprot
Match: A0A251QIX6 (RING-type domain-containing protein n=11 Tax=Prunus TaxID=3754 RepID=A0A251QIX6_PRUPE)

HSP 1 Score: 105 bits (263), Expect = 3.110e-20
Identity = 116/448 (25.89%), Postives = 178/448 (39.73%), Query Frame = 0
Query:  114 GPEVEKKNETPSEEDGGNCCTICLDPWASSGPHQVCCMPCGHLFGYSCIKEWIRGGNSRKRECPTCKTPARVKDLRYLFGLPSRLAVSD--------------------------------------VSEIQRLRDELKREKISHETTKIKYQETKKLAKIYREEMRNLQRHGKSSVQTFGHQNDSQRVETVDNVRLVSIYRTAGASLAV----AVDEDASY---LFNERVPGDGPRHRVGRIDIGRP--NVPIHSPHTTDKRVNCIKVCRHTCGAVYRHIAVASTDYSVAILTPNLQR-ALTLRVPGIPLSCSWLSSRPHLAAVGLVSGEVLMYDIRHTSTHLYESVLSRNQGSRAVHSLEEVKVDDSQNSSAVLAASPHG--VFGISFDGYMGAPNVYE-VKGGAPEDWAPTSFTVSGNMIAVAARRRGLTNCGSQEMGCSLLMHR 510
            G E  +K         G  C IC++ W+S G HQV C+PCGH++G SCI +WI+       +CP C T  ++KD+  L+  P  + V D                                      + E+  LR+       SH TTK         A +    M           Q  G Q D           ++         LAV      D DASY   +   R+ G G  H + ++++  P  N  I  P  T K +  +++    CG   R   +AS    ++IL+      A+   +PG   SCSW  + PH    GL +G +LM+D+RH+ T L+  V    +    +HSL + +   S  +  +L AS  G  V+ I      G+P+    +  G+ +  A  S   S +   + A  R  T   S+  G  +L+ R
Sbjct:   51 GEEGTRKRVFSVSNSEGFFCPICMESWSSQGDHQVSCLPCGHVYGMSCISKWIQQCGGTSAKCPQCNTKYKLKDIIKLYASP--VVVLDESLQKKVKSLDAXXXXXXXXXXXXXXXXXXXXXXXXXXIKELSNLRES------SHGTTKFLKPCCGDDAPLGETGMEPFSFTSAKGNQGQGAQWDHYFAHNFGRQGILHWKFQLQHELAVDGARLFDMDASYQILVLARRISGMGGTHMLKKVNLINPLENEDIQLPPGT-KAIKDLRIS--PCG---RLTLLASLGKKLSILSMGSNNFAMNYDLPGQAWSCSWDLNSPHHIYAGLQNGMLLMFDMRHSQTPLHSFVGPTPRPIHTIHSLRQNRAF-SHRTQKLLTASSSGPCVWNI------GSPSERPFLVPGSEDQGACVSVAYSPSTDDIVASYRPKTETSSETGGSQVLIKR 477          
The following BLAST results are available for this feature:
BLAST of Ggra6845.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IPY82.400e-22157.52E3 ubiquitin-protein ligase RFWD3 n=1 Tax=Gracilar... [more]
R7Q3D21.720e-9836.01RING-type domain-containing protein n=1 Tax=Chondr... [more]
A0A251SEM22.280e-2127.38Putative transducin/WD40 repeat-like superfamily p... [more]
E3 ubiquitin-protein ligase RFWD3-like isoform X1 n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE283834.590e-2130.64E3 ubiquitin-protein ligase RFWD3-like isoform X1 ... [more]
A0A4C1ZYU59.140e-2130.90E3 ubiquitin-protein ligase RFWD3 n=1 Tax=Eumeta v... [more]
E3 ubiquitin-protein ligase RFWD3-like n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018D0F55D1.140e-2027.87E3 ubiquitin-protein ligase RFWD3-like n=1 Tax=Plu... [more]
E3 ubiquitin-protein ligase RFWD3 n=2 Tax=Ochotona TaxID=9977 RepID=UPI001B34EEF31.350e-2026.63E3 ubiquitin-protein ligase RFWD3 n=2 Tax=Ochotona... [more]
A0A075A6681.970e-2027.96RING-type domain-containing protein n=4 Tax=Opisth... [more]
A0A7K5I3J92.890e-2024.23RFWD3 ligase (Fragment) n=1 Tax=Crotophaga sulciro... [more]
A0A251QIX63.110e-2025.89RING-type domain-containing protein n=11 Tax=Prunu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 227..247
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..123
NoneNo IPR availableCDDcd16450mRING-C3HGC3_RFWD3coord: 129..180
e-value: 1.31012E-22
score: 88.8725
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 126..185
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 133..179
e-value: 4.8E-5
score: 32.8
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 132..180
e-value: 9.5E-8
score: 32.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 133..180
score: 12.799091
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 107..249
e-value: 2.0E-13
score: 52.1
IPR037381E3 ubiquitin-protein ligase RFWD3PANTHERPTHR16047RFWD3 PROTEINcoord: 75..448
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 315..454

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:658493..660427 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6845.t1Ggra6845.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 658493..660427 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6845.t1 ID=Ggra6845.t1|Name=Ggra6845.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=645bp
MPSPTAPPNGGALQPPSVAQAIGLAIETITGGPSSTAIRDIRPEHIFHID
EEHIEPPLHPQTMPRVGSIQLIRNEDEERHESGSVVTVRSSQGSEEPSPS
PVIKRRRKSKSLPGPEVEKKNETPSEEDGGNCCTICLDPWASSGPHQVCC
MPCGHLFGYSCIKEWIRGGNSRKRECPTCKTPARVKDLRYLFGLPSRLAV
SDVSEIQRLRDELKREKISHETTKIKYQETKKLAKIYREEMRNLQRHGKS
SVQTFGHQNDSQRVETVDNVRLVSIYRTAGASLAVAVDEDASYLFNERVP
GDGPRHRVGRIDIGRPNVPIHSPHTTDKRVNCIKVCRHTCGAVYRHIAVA
STDYSVAILTPNLQRALTLRVPGIPLSCSWLSSRPHLAAVGLVSGEVLMY
DIRHTSTHLYESVLSRNQGSRAVHSLEEVKVDDSQNSSAVLAASPHGVFG
ISFDGYMGAPNVYEVKGGAPEDWAPTSFTVSGNMIAVAARRRGLTNCGSQ
EMGCSLLMHRGIVREGLDLKFGLSLGEPVYTSSQNVPFVYCGIVGGKDDD
LDTMLAYPDKNAQDKLSVWAYKRDAYDGASSWKEQEVLSDSQSQTQGLGN
GDVRAAAGFRLPRSAKINGVPDGTRGIFVTVGGDVIRVFAAGKY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR037381RFWD3
IPR036322WD40_repeat_dom_sf