Ggra6825.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6825.t1
Unique NameGgra6825.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length82
Homology
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BLAST of Ggra6825.t1 vs. uniprot
Match: A0A2V3IPT4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPT4_9FLOR)

HSP 1 Score: 127 bits (318), Expect = 1.150e-36
Identity = 74/81 (91.36%), Postives = 79/81 (97.53%), Query Frame = 0 
Query:    1 MVSSELKVAEKWDSALEKGIKRMAYGAIAGGIVAALMFRGVGIRSMIIGVXXXXXXXITYAEAKRDFEELSSTAAPAKAEI 81
            M SSELKVAEKWD+ALEKGIKRMAYGAIAGG+VAALMFRGVGIRSMIIGVXXXXXXXITYAEAKRDFEEL++ +APAKAEI
Sbjct:    1 MSSSELKVAEKWDTALEKGIKRMAYGAIAGGVVAALMFRGVGIRSMIIGVXXXXXXXITYAEAKRDFEELATQSAPAKAEI 81
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BLAST of Ggra6825.t1 vs. uniprot
Match: R7Q6G6 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6G6_CHOCR)

HSP 1 Score: 111 bits (278), Expect = 1.450e-30
Identity = 57/81 (70.37%), Postives = 67/81 (82.72%), Query Frame = 0 
Query:    1 MVSSELKVAEKWDSALEKGIKRMAYGAIAGGIVAALMFRGVGIRSMIIGVXXXXXXXITYAEAKRDFEELSSTAAPAKAEI 81
            M +SELKVAEKWD+ALEKGIKR AYGAIAGG+VAAL+FRGVGIRS I+G+       ITYAEAKRDFE+L+   APA+ +I
Sbjct:    1 MTTSELKVAEKWDTALEKGIKRTAYGAIAGGVVAALLFRGVGIRSAILGLGSGIGVGITYAEAKRDFEDLAPQEAPAEGKI 81
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BLAST of Ggra6825.t1 vs. uniprot
Match: A0A0M0JPL0 (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JPL0_9EUKA)

HSP 1 Score: 57.8 bits (138), Expect = 3.060e-9
Identity = 25/67 (37.31%), Postives = 41/67 (61.19%), Query Frame = 0 
Query:    5 ELKVAEKWDSALEKGIKRMAYGAIAGGIVAALMFRGVGIRSMIIGVXXXXXXXITYAEAKRDFEELS 71
            ELKVAE WD  +E  + ++AYG +AGG+ A ++FR    RS I+G+       + Y + K +F+ ++
Sbjct:   10 ELKVAETWDKCIENTVLKLAYGTLAGGLAAMILFRSPSARSSIVGLGCGVGVGMGYTDCKVEFDTIA 76
The following BLAST results are available for this feature:
BLAST of Ggra6825.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IPT41.150e-3691.36Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q6G61.450e-3070.37Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A0M0JPL03.060e-937.31Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007512MICOS complex subunit Mic10PFAMPF04418DUF543coord: 4..67
e-value: 7.8E-16
score: 57.8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 39..81
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..38
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:624996..625345 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6825.t1Ggra6825.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 624996..625345 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6825.t1 ID=Ggra6825.t1|Name=Ggra6825.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=82bp
MVSSELKVAEKWDSALEKGIKRMAYGAIAGGIVAALMFRGVGIRSMIIGV
GTGTGIGITYAEAKRDFEELSSTAAPAKAEI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007512Mic10