Ggra6823.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra6823.t1
Unique Name	Ggra6823.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	274

Homology

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BLAST of Ggra6823.t1 vs. uniprot
Match: A0A2V3IPV8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPV8_9FLOR)

HSP 1 Score: 245 bits (625), Expect = 8.920e-78
Identity = 172/275 (62.55%), Postives = 191/275 (69.45%), Query Frame = 0

Query:    1 MNSFALLQDDVED-TEVAYDNSAAQKAPTTDAPVPAVDVRDAAVAQAPEELNGADPTAPSPDAAXXXXXXXXXXXXXXXXPENAHKADQKPPKQKDLTLEEYLAKKAAMSSGLASLNIRGLRQANDGVDGFEKMSVLKKNNSPDDNSIMHEVAVKAQQQNKTIKDSTQAAVARNAEIQKFFKPDPSERRRGEYRRNYGERRGAARG-RFEHRADRGRGERXXXXXXXRGAYRXXXXXGFNNRQYDNETDHHRTVNGRQDTEDVPNVDDTSAFPSL 273
            MNSFALLQDDVED +E+  DN A+ K    +  VPAVDV+DAAV Q        D +AP  D A                P +  + DQKP KQ+DLTLEEYL KKAAMSSGLASLN RGLRQ NDGVDGFEKMSVLKKN++PDDNSIM +VAVKAQQQ KTIKDSTQAAVARNAEIQKFFKPDPS+RRRG+YRR Y +RRGA RG R            XXXXXXXRGAYR     G      D++ DH R  NGR D + VP+VDDTSAFPSL
Sbjct:    1 MNSFALLQDDVEDASELTPDNVASSKPHVDEVAVPAVDVQDAAVNQ------NDDSSAPHHDDALAADPQA---------PADKDQPDQKPLKQRDLTLEEYLEKKAAMSSGLASLNSRGLRQPNDGVDGFEKMSVLKKNDAPDDNSIMRDVAVKAQQQAKTIKDSTQAAVARNAEIQKFFKPDPSDRRRGDYRRGYRDRRGAGRGTRGMXXXXXXXXXXXXXXXXXRGAYR-----GGYTTHNDDDFDHRR-ANGRDDQDIVPDVDDTSAFPSL 254

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BLAST of Ggra6823.t1 vs. uniprot
Match: R7Q4V9 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4V9_CHOCR)

HSP 1 Score: 115 bits (288), Expect = 7.430e-27
Identity = 90/194 (46.39%), Postives = 110/194 (56.70%), Query Frame = 0

Query:    1 MNSFALLQDDVED-TEVAYDNSAAQKAPTTDAPVPAVDVRDAAVAQAPEELNGADPTAPSPDAAXXXXXXXXXXXXXXXXPENAHKADQKPPKQKDLTLEEYLAKKAAMSSGLASLNIRGLRQANDGVD-GFEKMSVLKKNN---SPDDNSIMHEVAVKAQQQNKTIKDSTQAAVARNAEIQKFFKPDPSERRR 189
            MNSFALLQDDVED T++A  +        T A  PA  V+DA            D  APS DA                 P +     +  PK+KDLTLEEYLA+KA  SS L SL+ +G R+ NDGV  GFE MS+L K++    P  +S+M  V VK Q +NK +KDST AAVA+NAEIQ FFK DP+  RR
Sbjct:    1 MNSFALLQDDVEDATDLAVPSKG------TPAETPAEAVQDA-------RATADDTAAPSTDA----------DAATSANPADPEGKPRPTPKEKDLTLEEYLAQKAQKSSSLTSLS-KGARKPNDGVSSGFENMSLLNKDDPAHGPAKDSLMGSVPVKEQHENKALKDSTHAAVAKNAEIQSFFKRDPASDRR 170

The following BLAST results are available for this feature:

BLAST of Ggra6823.t1 vs. uniprot

BLAST of Ggra6823.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IPV8	8.920e-78	62.55	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7Q4V9	7.430e-27	46.39	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 241..262
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..224
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..273

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000056_pilon	contig	tig00000056_pilon:622880..623701 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra6823.t1	Ggra6823.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000056_pilon 622880..623701 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra6823.t1 ID=Ggra6823.t1|Name=Ggra6823.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=274bp
MNSFALLQDDVEDTEVAYDNSAAQKAPTTDAPVPAVDVRDAAVAQAPEEL
NGADPTAPSPDAAANTNTNTDADADADADPENAHKADQKPPKQKDLTLEE
YLAKKAAMSSGLASLNIRGLRQANDGVDGFEKMSVLKKNNSPDDNSIMHE
VAVKAQQQNKTIKDSTQAAVARNAEIQKFFKPDPSERRRGEYRRNYGERR
GAARGRFEHRADRGRGERGRGGRGGRGAYRGAYRGGFNNRQYDNETDHHR
TVNGRQDTEDVPNVDDTSAFPSL*