Ggra6822.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6822.t1
Unique NameGgra6822.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length169
Homology
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BLAST of Ggra6822.t1 vs. uniprot
Match: A0A2V3IPU1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPU1_9FLOR)

HSP 1 Score: 174 bits (440), Expect = 5.110e-53
Identity = 87/138 (63.04%), Postives = 103/138 (74.64%), Query Frame = 0 
Query:    1 MALTREAIESADEYLKMDWDVIHIFHTTRLIITLPSSNTPLTSNEADALPLLFNSREYALRAGIMLNSEDFDVHQWESTEGVDLVYGRRGDAVSGKGACAFRLKKGNFPAVYGAISYSFPSLSTNAVTKLIEFLNDLP 138
            M L  E   SA++YLK DWDV+HIF   + + T+PS+   ++S EA A+P LF SR +ALRAGI+LNS+ F VHQWE+T GVDL YGRRGDA+SG GAC FR KK N    YGAI+YSFPSLS NAVTKLI FLN LP
Sbjct:    1 MLLESEWHSSAEKYLKSDWDVLHIFEHAQSVTTIPSTQQRISSKEASAIPPLFTSRHFALRAGILLNSQHFHVHQWETTRGVDLAYGRRGDALSGVGACVFRYKKHN-STFYGAITYSFPSLSANAVTKLISFLNSLP 137
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BLAST of Ggra6822.t1 vs. uniprot
Match: R7Q5D8 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5D8_CHOCR)

HSP 1 Score: 103 bits (258), Expect = 8.760e-26
Identity = 55/106 (51.89%), Postives = 73/106 (68.87%), Query Frame = 0 
Query:   52 LFNSREYALRAGIMLNSEDFDVHQWESTEGVDLVYGRRGDAVSGKGACAFRLKKGNFPAVYGAISYSFPSLSTNAVTKLIEFLNDLPEIHGPLPTPDSSLSTTKDI 157
            LF S EYA+RAGI L+   + VHQ+E+T GVDLVYGR GDAVSG GAC  R+++ N   +Y A+SY FPSLS NAV +L+E    L  +H  L   ++++S + DI
Sbjct:    8 LFTSAEYAVRAGIALSGASYAVHQYETTRGVDLVYGRTGDAVSGSGACVARVQQANGDCIYAAVSYDFPSLSANAVPELVE----LAHLH--LNATNATVSASADI 107
The following BLAST results are available for this feature:
BLAST of Ggra6822.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IPU15.110e-5363.04Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q5D88.760e-2651.89Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR41752FAMILY NOT NAMEDcoord: 16..137
IPR036140Profilin superfamilySUPERFAMILY55770Profilin (actin-binding protein)coord: 33..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:619938..621186 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6822.t1Ggra6822.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 619938..621186 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6822.t1 ID=Ggra6822.t1|Name=Ggra6822.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=169bp
MALTREAIESADEYLKMDWDVIHIFHTTRLIITLPSSNTPLTSNEADALP
LLFNSREYALRAGIMLNSEDFDVHQWESTEGVDLVYGRRGDAVSGKGACA
FRLKKGNFPAVYGAISYSFPSLSTNAVTKLIEFLNDLPEIHGPLPTPDSS
LSTTKDIYFDPLPPITYS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036140PFN_sf