Ggra6781.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6781.t1
Unique NameGgra6781.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length165
Homology
BLAST of Ggra6781.t1 vs. uniprot
Match: A0A2V3IPR6 (Putative ubiquitin-conjugating enzyme E2 18 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPR6_9FLOR)

HSP 1 Score: 337 bits (863), Expect = 3.890e-117
Identity = 160/164 (97.56%), Postives = 163/164 (99.39%), Query Frame = 0
Query:    1 MNMGGPSSHRRKELTRVAQRRLTRELAEWSVKSPPVPGMSVSETDRVDEWLVTVTGAAGSVYENEKYTLRFVFPSDYPMEAPEVVFLQPTPRHPHVYSNGHICLNVLYDGWSPALTVTSVCLSIVSMLSSATKKGVPPDNDTYIRNCQGRSPKQTRWMFHDDHV 164
            MNMGGPSSHRRKELTRVAQRRLTRELAEWSVK+PPVPGMSVSETDRVDEWLVTVTGAAGSVYENE+Y LRFVFP+DYPMEAPEVVFLQPTPRHPHVYSNGHICLNVLYDGWSPALTVTSVCLSIVSMLSSATKKGVPPDNDTYIRNCQGRSPKQTRWMFHDDHV
Sbjct:    1 MNMGGPSSHRRKELTRVAQRRLTRELAEWSVKTPPVPGMSVSETDRVDEWLVTVTGAAGSVYENEQYILRFVFPADYPMEAPEVVFLQPTPRHPHVYSNGHICLNVLYDGWSPALTVTSVCLSIVSMLSSATKKGVPPDNDTYIRNCQGRSPKQTRWMFHDDHV 164          
BLAST of Ggra6781.t1 vs. uniprot
Match: R7QNR9 (UBC core domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNR9_CHOCR)

HSP 1 Score: 247 bits (630), Expect = 6.350e-82
Identity = 120/134 (89.55%), Postives = 124/134 (92.54%), Query Frame = 0
Query:    4 GGPSSHRRKELTRVAQRRLTRELAEWSVKSPPVPGMSVSETDRVDEWLVTVTGAAGSVYENEKYTLRFVFPSDYPMEAPEVVFLQPTPRHPHVYSNGHICLNVLYDGWSPALTVTSVCLSIVSMLSSATKKGVP 137
            G PSS   KELTRVAQRRLTRELAEWSVK+PPVPGMSV +TDRVDEW VTVTGAA SVYENE+YTLRFVFPSDYPMEAPEV+FL PTPRHPHVYSNGHICLNVLYDGWSPALTVTSVCLSIVSMLSSA KKG P
Sbjct:    8 GAPSSSLPKELTRVAQRRLTRELAEWSVKNPPVPGMSVEQTDRVDEWRVTVTGAASSVYENERYTLRFVFPSDYPMEAPEVIFLSPTPRHPHVYSNGHICLNVLYDGWSPALTVTSVCLSIVSMLSSAAKKGSP 141          
BLAST of Ggra6781.t1 vs. uniprot
Match: M2VXW6 (Ubiquitin-conjugating enzyme E2 W n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VXW6_GALSU)

HSP 1 Score: 226 bits (575), Expect = 3.490e-73
Identity = 106/151 (70.20%), Postives = 125/151 (82.78%), Query Frame = 0
Query:   14 LTRVAQRRLTRELAEWSVKSPPVPGMSVSETDRVDEWLVTVTGAAGSVYENEKYTLRFVFPSDYPMEAPEVVFLQPTPRHPHVYSNGHICLNVLYDGWSPALTVTSVCLSIVSMLSSATKKGVPPDNDTYIRNCQGRSPKQTRWMFHDDHV 164
            L+ VA++RL +EL EW V   PVPGMSV + +R+D W V V GA  +++  E+YTLRF FP +YP+EAPEVVFLQPTP H HVY+NGHICLNVLYDGWSPALTVTSVCLSI+SMLSSAT+KG+P DND YIRN +GRSPK TRW+FHDD V
Sbjct:   19 LSAVARKRLLKELREW-VTGDPVPGMSVQQPERLDLWYVKVVGAEDTIFVGEEYTLRFSFPREYPIEAPEVVFLQPTPAHQHVYTNGHICLNVLYDGWSPALTVTSVCLSILSMLSSATEKGIPKDNDAYIRNSRGRSPKLTRWLFHDDSV 168          
BLAST of Ggra6781.t1 vs. uniprot
Match: A0A0K9RUC4 (UBC core domain-containing protein n=1 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9RUC4_SPIOL)

HSP 1 Score: 205 bits (521), Expect = 4.570e-65
Identity = 92/161 (57.14%), Postives = 121/161 (75.16%), Query Frame = 0
Query:    3 MGGPSSHRRKELTRVAQRRLTRELAEWSVKSPPVPGMSVSETDRVDEWLVTVTGAAGSVYENEKYTLRFVFPSDYPMEAPEVVFLQPTPRHPHVYSNGHICLNVLYDGWSPALTVTSVCLSIVSMLSSATKKGVPPDNDTYIRNCQ-GRSPKQTRWMFHDD 162
            M   S+  RK L+++AQ RL +ELAEW +  PP  G+    TD +  W++ V+GA G++Y NE Y L+  FP  YPMEAP+V+F+ P P HPH+YSNGHICL++LYD WSPA+TV S+C+SI+SMLSS+T K  PPDND Y++NC+ GRSPK+TRW FHDD
Sbjct:    1 MTSSSTQSRKVLSKIAQNRLQKELAEWQLNPPP--GLKHKITDNLQRWVIDVSGAPGTLYANETYQLQVDFPEHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVNSICISILSMLSSSTSKQRPPDNDRYVKNCRNGRSPKETRWWFHDD 159          
BLAST of Ggra6781.t1 vs. uniprot
Match: A0A2J6LBG5 (UBC core domain-containing protein n=2 Tax=Asteraceae TaxID=4210 RepID=A0A2J6LBG5_LACSA)

HSP 1 Score: 204 bits (518), Expect = 1.310e-64
Identity = 95/163 (58.28%), Postives = 120/163 (73.62%), Query Frame = 0
Query:    3 MGGPSSHRRKELTRVAQRRLTRELAEWSVKSPPVPGMSVSETDRVDEWLVTVTGAAGSVYENEKYTLRFVFPSDYPMEAPEVVFLQPTPRHPHVYSNGHICLNVLYDGWSPALTVTSVCLSIVSMLSSATKKGVPPDNDTYIRNCQ-GRSPKQTRWMFHDDHV 164
            M G S+  RK L+++A  RL +EL EW V  P   G     TD +  W++ V GA G++Y NEKY L+  FP +YPMEAP+V+FL P P HPH+YSNGHICL++LYD WSPA+TV+SVC+SI+SMLSS+T K  P DND Y+RNC+ GRSPK+TRW FHDD V
Sbjct:    1 MTGSSTSSRKVLSKIASNRLQKELVEWQVNPPS--GFVHKVTDNLQRWVIEVYGAQGTIYANEKYQLQVDFPENYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKERPEDNDRYVRNCRNGRSPKETRWWFHDDKV 161          
BLAST of Ggra6781.t1 vs. uniprot
Match: A0A7C9DCT4 (E2 ubiquitin-conjugating enzyme n=2 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9DCT4_OPUST)

HSP 1 Score: 204 bits (518), Expect = 1.310e-64
Identity = 95/163 (58.28%), Postives = 120/163 (73.62%), Query Frame = 0
Query:    3 MGGPSSHRRKELTRVAQRRLTRELAEWSVKSPPVPGMSVSETDRVDEWLVTVTGAAGSVYENEKYTLRFVFPSDYPMEAPEVVFLQPTPRHPHVYSNGHICLNVLYDGWSPALTVTSVCLSIVSMLSSATKKGVPPDNDTYIRNC-QGRSPKQTRWMFHDDHV 164
            M G S+  RK L+++A  RL +EL EW   +PP  G     TD +  W++ VTGA G++Y NEKY L+  FP  YPMEAP+V+F+ P P HPH+YSNGHICL++LYD WSPA+TV+S+C+SI+SMLSSAT K  P DND Y+RNC  GRSPK+TRW FHDD V
Sbjct:    1 MTGSSASSRKALSKIASNRLQKELTEWH-HNPPA-GFKHKVTDNLQRWIIEVTGAPGTIYANEKYQLQVDFPEHYPMEAPQVIFVPPAPMHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSATVKERPEDNDRYVRNCGNGRSPKETRWWFHDDKV 161          
BLAST of Ggra6781.t1 vs. uniprot
Match: probable ubiquitin-conjugating enzyme E2 16 isoform X1 n=2 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8BE2A (probable ubiquitin-conjugating enzyme E2 16 isoform X1 n=2 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8BE2A)

HSP 1 Score: 202 bits (515), Expect = 3.740e-64
Identity = 94/161 (58.39%), Postives = 118/161 (73.29%), Query Frame = 0
Query:    3 MGGPSSHRRKELTRVAQRRLTRELAEWSVKSPPVPGMSVSETDRVDEWLVTVTGAAGSVYENEKYTLRFVFPSDYPMEAPEVVFLQPTPRHPHVYSNGHICLNVLYDGWSPALTVTSVCLSIVSMLSSATKKGVPPDNDTYIRNCQ-GRSPKQTRWMFHDD 162
            M G S+   K L+++A  RL +EL EW V  PP  G +   TD +  W++ V GA G++Y NEKY L+  FP  YPMEAP+V+FL P P HPH+YSNGHICL++LYD WSPA+TV SVC+SI+SMLSS+T K  P DND YI+NC+ GRSPK+TRW FHDD
Sbjct:    1 MTGSSASSHKALSKIASNRLQKELMEWQVNPPP--GFTHQVTDNLQRWVIEVHGAQGTIYANEKYQLQIDFPEHYPMEAPQVIFLHPVPLHPHIYSNGHICLDILYDSWSPAMTVGSVCISILSMLSSSTVKEQPGDNDRYIKNCRNGRSPKETRWWFHDD 159          
BLAST of Ggra6781.t1 vs. uniprot
Match: A0A218X7U8 (probable ubiquitin-conjugating enzyme E2 18 n=1 Tax=Punica granatum TaxID=22663 RepID=A0A218X7U8_PUNGR)

HSP 1 Score: 201 bits (510), Expect = 2.090e-63
Identity = 90/164 (54.88%), Postives = 120/164 (73.17%), Query Frame = 0
Query:    1 MNMGGPSSHRRKELTRVAQRRLTRELAEWSVKSPPVPGMSVSETDRVDEWLVTVTGAAGSVYENEKYTLRFVFPSDYPMEAPEVVFLQPTPRHPHVYSNGHICLNVLYDGWSPALTVTSVCLSIVSMLSSATKKGVPPDNDTYIRNCQGRSPKQTRWMFHDDHV 164
            M    P+S  RK L+++A  RL +EL EW V  P   G  +  TD +  W++ V GA G++Y +E Y L+  FP  YPMEAP+V+F+ P P HPH+YSNGHICL++LYD WSPA+TV+S+C+SI+SMLSS+T K +P DND Y++NC+GRSPK+TRW FHDD V
Sbjct:    1 MTSSSPAS--RKALSKIACNRLQKELVEWQVNPPS--GFKLKLTDNLQRWVIEVNGAPGTLYADESYQLQVDFPEHYPMEAPQVIFIPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSSTVKQLPADNDRYVKNCRGRSPKETRWWFHDDTV 160          
BLAST of Ggra6781.t1 vs. uniprot
Match: C6SVP6 (UBC core domain-containing protein n=12 Tax=fabids TaxID=91835 RepID=C6SVP6_SOYBN)

HSP 1 Score: 200 bits (509), Expect = 3.060e-63
Identity = 93/163 (57.06%), Postives = 119/163 (73.01%), Query Frame = 0
Query:    3 MGGPSSHRRKELTRVAQRRLTRELAEWSVKSPPVPGMSVSETDRVDEWLVTVTGAAGSVYENEKYTLRFVFPSDYPMEAPEVVFLQPTPRHPHVYSNGHICLNVLYDGWSPALTVTSVCLSIVSMLSSATKKGVPPDNDTYIRNCQ-GRSPKQTRWMFHDDHV 164
            M   S+  RK L+++A  RL +EL EW V  P   G     TD +  W+V VTGA G++Y NE Y L+  FP +YPMEAP+V+FL P P HPH+YSNGHICL++LYD WSPA+TV+S+C+SI+SMLSS+T K  P DND Y++NC+ GRSPK+TRW FHDD V
Sbjct:    1 MTSSSAAARKNLSKIACNRLQKELVEWQVNPPT--GFKHKVTDNLQRWVVEVTGAPGTLYANETYQLQVDFPENYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSSTTKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161          
BLAST of Ggra6781.t1 vs. uniprot
Match: A0A7I8JAN7 (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8JAN7_SPIIN)

HSP 1 Score: 200 bits (509), Expect = 3.060e-63
Identity = 96/163 (58.90%), Postives = 121/163 (74.23%), Query Frame = 0
Query:    3 MGGPSSHRRKELTRVAQRRLTRELAEWSVKSPPVPGMSVSETDRVDEWLVTVTGAAGSVYENEKYTLRFVFPSDYPMEAPEVVFLQPTPRHPHVYSNGHICLNVLYDGWSPALTVTSVCLSIVSMLSSATKKGVPPDNDTYIRNCQ-GRSPKQTRWMFHDDHV 164
            M   SS   K L+++A  RL +ELAEW V +PP  G     +D +  W++ V GA G++Y +E Y L+  FP  YPMEAP+V+FLQP P HPH+YSNGHICL++LYD WSPA+TV+SVC+SI+SMLSS+T K  PPDND Y+RNCQ GRSPK+TRW FHDD V
Sbjct:    1 MTSTSSPSTKALSKIACNRLQKELAEWQV-NPPF-GFKHKISDNLQRWIIEVAGAPGTLYVSETYQLQVDFPEHYPMEAPQVIFLQPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKQRPPDNDRYVRNCQNGRSPKETRWWFHDDKV 161          
The following BLAST results are available for this feature:
BLAST of Ggra6781.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IPR63.890e-11797.56Putative ubiquitin-conjugating enzyme E2 18 n=1 Ta... [more]
R7QNR96.350e-8289.55UBC core domain-containing protein n=1 Tax=Chondru... [more]
M2VXW63.490e-7370.20Ubiquitin-conjugating enzyme E2 W n=1 Tax=Galdieri... [more]
A0A0K9RUC44.570e-6557.14UBC core domain-containing protein n=1 Tax=Spinaci... [more]
A0A2J6LBG51.310e-6458.28UBC core domain-containing protein n=2 Tax=Asterac... [more]
A0A7C9DCT41.310e-6458.28E2 ubiquitin-conjugating enzyme n=2 Tax=Opuntia st... [more]
probable ubiquitin-conjugating enzyme E2 16 isoform X1 n=2 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8BE2A3.740e-6458.39probable ubiquitin-conjugating enzyme E2 16 isofor... [more]
A0A218X7U82.090e-6354.88probable ubiquitin-conjugating enzyme E2 18 n=1 Ta... [more]
C6SVP63.060e-6357.06UBC core domain-containing protein n=12 Tax=fabids... [more]
A0A7I8JAN73.060e-6358.90Hypothetical protein n=1 Tax=Spirodela intermedia ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 20..164
e-value: 1.4E-29
score: 114.2
NoneNo IPR availablePANTHERPTHR24068:SF300UBIQUITIN-CONJUGATING ENZYME 15, E2coord: 14..163
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 14..163
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 15..164
e-value: 2.1E-43
score: 149.4
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 12..130
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 21..152
e-value: 8.5E-32
score: 109.7
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 17..164
score: 36.900978
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 20..130
e-value: 1.38827E-36
score: 121.54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:494667..495161 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6781.t1Ggra6781.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 494667..495161 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6781.t1 ID=Ggra6781.t1|Name=Ggra6781.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=165bp
MNMGGPSSHRRKELTRVAQRRLTRELAEWSVKSPPVPGMSVSETDRVDEW
LVTVTGAAGSVYENEKYTLRFVFPSDYPMEAPEVVFLQPTPRHPHVYSNG
HICLNVLYDGWSPALTVTSVCLSIVSMLSSATKKGVPPDNDTYIRNCQGR
SPKQTRWMFHDDHV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2