Ggra6767.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6767.t1
Unique NameGgra6767.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length394
Homology
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BLAST of Ggra6767.t1 vs. uniprot
Match: A0A2V3IVN7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVN7_9FLOR)

HSP 1 Score: 250 bits (639), Expect = 1.640e-76
Identity = 153/362 (42.27%), Postives = 210/362 (58.01%), Query Frame = 0 
Query:   26 HFHTLSASQYARFRQA-PHALPTPPPSAELAPNASSSSSLRLTLLPSLQASLLRHAQSDLPLFVAPLPRRHYRRVYRLLRSAHTAVVPHAHAVEYPLVACHAPPPPPSRARSHAAHCLPLPAAAPVAALARKYRLSALPYDWRRSSRELLRDDRRLARRLADALRCAHCVVLAHGSACLLLRAAVRQQRRAAVRAVTACAAPVSKRVANLTRHGAGLLRVGDAHVFADCMSAVRESPVRYGAMAHELGMLPPRRGRSHIPDVSGLDFDARPAPPVAERRRLAAAFDAVLELGAHAPHLPRLDFCLEGAGADVLVRGQRVDGDGVVERGACRGVARRVLTVQARHLELVRFADALVAQLHHQR 386
            HF  L+ SQY   R +  ++  T  PS   AP   S+  +++  +PS Q +LL++ +  LPLF++PL R  Y+RVY LLRS  T  V   +AVEY    C            H +HC+ +P    V+ L  KYR+ +L YDWR++ + +          +  AL+C  CV++AHGS C LLR A    R   VR+ TAC AP + R A+ T+ G GL   G+AH   DCM +VRE  + +G+MA ELGML  R+GRS +P V GLD++        ER RL  +FDA+ ELG +   +  L  C+EG G    V G  +DGDGVVE+G+CRGVA +VL+VQARHL+LVR  DA V + +  R
Sbjct:   29 HFLKLTRSQYTHLRSSGDYSSLTSSPSPRTAPLLKSN--VQIVFIPSFQGTLLQNTEYQLPLFLSPLSRTSYKRVYELLRSEQTHAVTGEYAVEYAHYGC-------KNNSGHFSHCMSVPLRGAVSHLKEKYRVQSLGYDWRQTRQTIYNGG--FGEEIRQALKCDQCVIIAHGSGCSLLRYAAG--REPIVRSTTACIAPATARTASATKQGDGLATAGNAHTIGDCMRSVRERKIDFGSMAGELGMLRGRKGRSALPAVEGLDYEEVRMVSKQERARLLRSFDAIRELGVNDGAV--LHVCVEGLGQVTRVDGIEMDGDGVVEKGSCRGVANQVLSVQARHLDLVRMVDAAVTERYRSR 375
The following BLAST results are available for this feature:
BLAST of Ggra6767.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IVN71.640e-7642.27Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..393
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:459070..460251 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6767.t1Ggra6767.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 459070..460251 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6767.t1 ID=Ggra6767.t1|Name=Ggra6767.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=394bp
MPRTWRRAVLVVLVVAAAAAAVAAAHFHTLSASQYARFRQAPHALPTPPP
SAELAPNASSSSSLRLTLLPSLQASLLRHAQSDLPLFVAPLPRRHYRRVY
RLLRSAHTAVVPHAHAVEYPLVACHAPPPPPSRARSHAAHCLPLPAAAPV
AALARKYRLSALPYDWRRSSRELLRDDRRLARRLADALRCAHCVVLAHGS
ACLLLRAAVRQQRRAAVRAVTACAAPVSKRVANLTRHGAGLLRVGDAHVF
ADCMSAVRESPVRYGAMAHELGMLPPRRGRSHIPDVSGLDFDARPAPPVA
ERRRLAAAFDAVLELGAHAPHLPRLDFCLEGAGADVLVRGQRVDGDGVVE
RGACRGVARRVLTVQARHLELVRFADALVAQLHHQRTGTTTTT*
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