Ggra6767.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6767.t1
Unique NameGgra6767.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length394
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:459070..460251 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6767Ggra6767Gracilaria gracilis GNS1m malegenetig00000056_pilon 459070..460251 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6767.t1.start1Ggra6767.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000056_pilon 459070..459072 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6767.t1.CDS1Ggra6767.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000056_pilon 459070..460251 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6767.t1.exon1Ggra6767.t1.exon1Gracilaria gracilis GNS1m maleexontig00000056_pilon 459070..460251 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6767.t1.stop1Ggra6767.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000056_pilon 460249..460251 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6767.t1Ggra6767.t1Gracilaria gracilis GNS1m malepolypeptidetig00000056_pilon 459070..460251 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6767.t1 ID=Ggra6767.t1|Name=Ggra6767.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=394bp
MPRTWRRAVLVVLVVAAAAAAVAAAHFHTLSASQYARFRQAPHALPTPPP
SAELAPNASSSSSLRLTLLPSLQASLLRHAQSDLPLFVAPLPRRHYRRVY
RLLRSAHTAVVPHAHAVEYPLVACHAPPPPPSRARSHAAHCLPLPAAAPV
AALARKYRLSALPYDWRRSSRELLRDDRRLARRLADALRCAHCVVLAHGS
ACLLLRAAVRQQRRAAVRAVTACAAPVSKRVANLTRHGAGLLRVGDAHVF
ADCMSAVRESPVRYGAMAHELGMLPPRRGRSHIPDVSGLDFDARPAPPVA
ERRRLAAAFDAVLELGAHAPHLPRLDFCLEGAGADVLVRGQRVDGDGVVE
RGACRGVARRVLTVQARHLELVRFADALVAQLHHQRTGTTTTT*
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spliced messenger RNA

>Ggra6767.t1 ID=Ggra6767.t1|Name=Ggra6767.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1182bp|location=Sequence derived from alignment at tig00000056_pilon:459070..460251+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCCCGCACTTGGcgtcgcgccgtcctcgtcgtcctcgtcgtcgCGGC
CGCGGCCGCGGCCGTCGCCGCGGCGCACTTTCACACGCTGTCCGCCAGCC
AGTACGCGCGCTTCCGCCAGGcgccgcacgccctgcccaccccgccgccc
agcgccgagctcgcgcccaacgcGTCGTCGTCGTCGTCGCTGCGCCTCAC
TTTGCTGCCGTCGTTGCAGGCGTCGCTGCTGCGCCACGCGCAGTCCGACC
TGCCGCTGTTCGTGGCGCCGCTGCCGCGCCGCCACTACCGCCGCGTGTAC
CGCCTGCTACGCAGCGCGCACACCGCCGTCGTCCCCCACGCGCACGCCGT
GGAGTACCCGCTCGTCGCGTGCCACGCGCCGCCGCCGCCGCCGTCGCGCG
CGCGCTCGCACGCCGCGCACTGCCTGCCGCTGCCGGCCGCCGCGCCCGTG
GCGGCGCTCGCGCGCAAGTACCGACTGTCCGCGCTGCCGTACGACTGGCG
CCGCTCGTCGCGCGAGCTGCTACGCGACGACCGCCGCCTCGCGCGCCGCC
TCGCGGACGCGCTGCGCTGCGCGCACTGCGTCGTGCTGGCGCATGGCTCG
GCGTGCTTGCTGCTGCGCGCCGCCGTGCGCCAACAGCGCCGCGCCGCTGT
GCGCGCCGTTACGGCGTGCGCCGCGCCCGTCAGTAAGCGCGTGGCCAACC
TCACGCGCCACGGCGCCGGGCTGCTGCGCGTGGGCGACGCGCACGTCTTT
GCCGACTGCATGAGCGCCGTGCGCGAGTCGCCCGTGCGGTACGGCGCCAT
GGCGCACGAGCTGGGCATGTTGCCGCCGCGCCGCGGACGTAGCCACATCC
CCGACGTGAGTGGGCTCGACTTTGACGCGCGCCCCGCCCCGCCCGTTGCG
GAGCGCCGCCGACTGGCCGCTGCTTTCGACGCCGTCCTTGAGTTGGGCGC
TCATGCGCCGCACTTGCCCCGCCTCGACTTTTGTCTGGAGGGCGCTGGCG
CGGACGTGCTTGTGCGCGGTCAGCGCGTTGATGGCGACGGCGTCGTGGAA
CGGGGCGCGTGTCGCGGCGTGGCGCGCCGCGTGCTCACTGTGCAGGCGCG
CCATTTGGAGTTGGTTCGCTTTGCGGACGCTCTTGTTGCCCAGCTGCACC
ACCAGCGTACTGGTACTACTACCACCACTTGA
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protein sequence of Ggra6767.t1

>Ggra6767.t1 ID=Ggra6767.t1|Name=Ggra6767.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=394bp
MPRTWRRAVLVVLVVAAAAAAVAAAHFHTLSASQYARFRQAPHALPTPPP
SAELAPNASSSSSLRLTLLPSLQASLLRHAQSDLPLFVAPLPRRHYRRVY
RLLRSAHTAVVPHAHAVEYPLVACHAPPPPPSRARSHAAHCLPLPAAAPV
AALARKYRLSALPYDWRRSSRELLRDDRRLARRLADALRCAHCVVLAHGS
ACLLLRAAVRQQRRAAVRAVTACAAPVSKRVANLTRHGAGLLRVGDAHVF
ADCMSAVRESPVRYGAMAHELGMLPPRRGRSHIPDVSGLDFDARPAPPVA
ERRRLAAAFDAVLELGAHAPHLPRLDFCLEGAGADVLVRGQRVDGDGVVE
RGACRGVARRVLTVQARHLELVRFADALVAQLHHQRTGTTTTT*
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mRNA from alignment at tig00000056_pilon:459070..460251+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6767.t1 ID=Ggra6767.t1|Name=Ggra6767.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1182bp|location=Sequence derived from alignment at tig00000056_pilon:459070..460251+ (Gracilaria gracilis GNS1m male)
ATGCCCCGCACTTGGcgtcgcgccgtcctcgtcgtcctcgtcgtcgCGGC
CGCGGCCGCGGCCGTCGCCGCGGCGCACTTTCACACGCTGTCCGCCAGCC
AGTACGCGCGCTTCCGCCAGGcgccgcacgccctgcccaccccgccgccc
agcgccgagctcgcgcccaacgcGTCGTCGTCGTCGTCGCTGCGCCTCAC
TTTGCTGCCGTCGTTGCAGGCGTCGCTGCTGCGCCACGCGCAGTCCGACC
TGCCGCTGTTCGTGGCGCCGCTGCCGCGCCGCCACTACCGCCGCGTGTAC
CGCCTGCTACGCAGCGCGCACACCGCCGTCGTCCCCCACGCGCACGCCGT
GGAGTACCCGCTCGTCGCGTGCCACGCGCCGCCGCCGCCGCCGTCGCGCG
CGCGCTCGCACGCCGCGCACTGCCTGCCGCTGCCGGCCGCCGCGCCCGTG
GCGGCGCTCGCGCGCAAGTACCGACTGTCCGCGCTGCCGTACGACTGGCG
CCGCTCGTCGCGCGAGCTGCTACGCGACGACCGCCGCCTCGCGCGCCGCC
TCGCGGACGCGCTGCGCTGCGCGCACTGCGTCGTGCTGGCGCATGGCTCG
GCGTGCTTGCTGCTGCGCGCCGCCGTGCGCCAACAGCGCCGCGCCGCTGT
GCGCGCCGTTACGGCGTGCGCCGCGCCCGTCAGTAAGCGCGTGGCCAACC
TCACGCGCCACGGCGCCGGGCTGCTGCGCGTGGGCGACGCGCACGTCTTT
GCCGACTGCATGAGCGCCGTGCGCGAGTCGCCCGTGCGGTACGGCGCCAT
GGCGCACGAGCTGGGCATGTTGCCGCCGCGCCGCGGACGTAGCCACATCC
CCGACGTGAGTGGGCTCGACTTTGACGCGCGCCCCGCCCCGCCCGTTGCG
GAGCGCCGCCGACTGGCCGCTGCTTTCGACGCCGTCCTTGAGTTGGGCGC
TCATGCGCCGCACTTGCCCCGCCTCGACTTTTGTCTGGAGGGCGCTGGCG
CGGACGTGCTTGTGCGCGGTCAGCGCGTTGATGGCGACGGCGTCGTGGAA
CGGGGCGCGTGTCGCGGCGTGGCGCGCCGCGTGCTCACTGTGCAGGCGCG
CCATTTGGAGTTGGTTCGCTTTGCGGACGCTCTTGTTGCCCAGCTGCACC
ACCAGCGTACTGGTACTACTACCACCACTTGA
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Coding sequence (CDS) from alignment at tig00000056_pilon:459070..460251+

>Ggra6767.t1 ID=Ggra6767.t1|Name=Ggra6767.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1182bp|location=Sequence derived from alignment at tig00000056_pilon:459070..460251+ (Gracilaria gracilis GNS1m male)
ATGCCCCGCACTTGGcgtcgcgccgtcctcgtcgtcctcgtcgtcgCGGC
CGCGGCCGCGGCCGTCGCCGCGGCGCACTTTCACACGCTGTCCGCCAGCC
AGTACGCGCGCTTCCGCCAGGcgccgcacgccctgcccaccccgccgccc
agcgccgagctcgcgcccaacgcGTCGTCGTCGTCGTCGCTGCGCCTCAC
TTTGCTGCCGTCGTTGCAGGCGTCGCTGCTGCGCCACGCGCAGTCCGACC
TGCCGCTGTTCGTGGCGCCGCTGCCGCGCCGCCACTACCGCCGCGTGTAC
CGCCTGCTACGCAGCGCGCACACCGCCGTCGTCCCCCACGCGCACGCCGT
GGAGTACCCGCTCGTCGCGTGCCACGCGCCGCCGCCGCCGCCGTCGCGCG
CGCGCTCGCACGCCGCGCACTGCCTGCCGCTGCCGGCCGCCGCGCCCGTG
GCGGCGCTCGCGCGCAAGTACCGACTGTCCGCGCTGCCGTACGACTGGCG
CCGCTCGTCGCGCGAGCTGCTACGCGACGACCGCCGCCTCGCGCGCCGCC
TCGCGGACGCGCTGCGCTGCGCGCACTGCGTCGTGCTGGCGCATGGCTCG
GCGTGCTTGCTGCTGCGCGCCGCCGTGCGCCAACAGCGCCGCGCCGCTGT
GCGCGCCGTTACGGCGTGCGCCGCGCCCGTCAGTAAGCGCGTGGCCAACC
TCACGCGCCACGGCGCCGGGCTGCTGCGCGTGGGCGACGCGCACGTCTTT
GCCGACTGCATGAGCGCCGTGCGCGAGTCGCCCGTGCGGTACGGCGCCAT
GGCGCACGAGCTGGGCATGTTGCCGCCGCGCCGCGGACGTAGCCACATCC
CCGACGTGAGTGGGCTCGACTTTGACGCGCGCCCCGCCCCGCCCGTTGCG
GAGCGCCGCCGACTGGCCGCTGCTTTCGACGCCGTCCTTGAGTTGGGCGC
TCATGCGCCGCACTTGCCCCGCCTCGACTTTTGTCTGGAGGGCGCTGGCG
CGGACGTGCTTGTGCGCGGTCAGCGCGTTGATGGCGACGGCGTCGTGGAA
CGGGGCGCGTGTCGCGGCGTGGCGCGCCGCGTGCTCACTGTGCAGGCGCG
CCATTTGGAGTTGGTTCGCTTTGCGGACGCTCTTGTTGCCCAGCTGCACC
ACCAGCGTACTGGTACTACTACCACCACTTGA
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