Ggra6731.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6731.t1
Unique NameGgra6731.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length355
Homology
BLAST of Ggra6731.t1 vs. uniprot
Match: A0A2V3IJD7 (Transcription initiation factor TFIID subunit 7 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJD7_9FLOR)

HSP 1 Score: 427 bits (1097), Expect = 1.370e-146
Identity = 292/355 (82.25%), Postives = 311/355 (87.61%), Query Frame = 0
Query:    1 MNEQQYILRLPQPLVEPMRFALSSNKKREGAGEDRKPSKFQINFKDERNAVFTIDGKDYPASLMDLPCIVETHKTADKRTFYKSGDLHQVLVVRMPDETPPKETYLPDGVTPATRGAAARLKPPKRFFTRDEVELIERRIKYVIDHKTSFTQKKTQENPTEEEEVVIEXETVNAQPGKNAADPTKSAAN-GDATGTAPRAGKPPLPSESLPAPMPTDVXXXXAVDXXXXXXXXXXXXXXXXXXXXXXIDTPGPDGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKEDIAKRRIERLKLDQSIKEQKAKIADLEEKAEKAPNPVLKKRFLSKRPELQTELTELEKRRQELGEE 354
            MNEQQ+ILRLPQPLVEPMRFALSSNKKREGAG+DR+ SKF+I+FKDERNA+FTIDGK YPASLMDLPCIVETHKTADKRTFYKSGDLHQVLVVRMPDE  PK T LPDG+TPAT+GAA R+KPP+RFFTRDEVELIERRIKYVIDHKTSFTQKKTQ+NP         X  VNAQ  KNA D  KS    G+       AGKPPLPSE+  AP P DV XXXA DXXXXXXXXXXXXXXXXXXXXXXIDTPGPDGEE XXXXXXXXXXXXXXXXXXXXXXXXXXXXDKED+AK+RIER+KLDQSIKEQKAKIADLE +AEK PNP+LKKR LSKRPELQTELT+LEKRRQELGEE
Sbjct:    1 MNEQQFILRLPQPLVEPMRFALSSNKKREGAGDDRQASKFEIDFKDERNAIFTIDGKHYPASLMDLPCIVETHKTADKRTFYKSGDLHQVLVVRMPDEPVPKHTQLPDGITPATKGAAKRMKPPERFFTRDEVELIERRIKYVIDHKTSFTQKKTQDNPXXXXXXXXXXXXVNAQSAKNAGDAKKSTTTPGETAAAVASAGKPPLPSETPIAPSPMDVQXXXAADXXXXXXXXXXXXXXXXXXXXXXIDTPGPDGEEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKEDMAKKRIERIKLDQSIKEQKAKIADLEAQAEKVPNPILKKRLLSKRPELQTELTKLEKRRQELGEE 355          
BLAST of Ggra6731.t1 vs. uniprot
Match: A0A7S1EPS7 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EPS7_9RHOD)

HSP 1 Score: 140 bits (353), Expect = 1.730e-35
Identity = 74/157 (47.13%), Postives = 101/157 (64.33%), Query Frame = 0
Query:    1 MNEQQYILRLPQPLVEPMRFALSSNKKREGAGEDRKPS---KFQINFKDERNAVFTIDGKDYPASLMDLPCIVETHKTADKRTFYKSGDLHQVLVVRMPDETPPKETYLPDGVTPATRGAAARLKPPKRFFTRDEVELIERRIKYVIDHKTSFTQKK 154
            M+E Q+ILRLP  L   MRF LSS   R  +   +  +   +F + F ++R+A   +DG  YPA+LMDLP +VE+HKT D  T +KS D+HQVLVVR P++TPP    L DG+TPA++GA  R    K     +++  +E +IKYV+DHK SF QKK
Sbjct:    1 MDEDQFILRLPPELSSKMRFLLSSKSARGNSSAPKDETGTPRFNLVFLNDRHATLQVDGVLYPATLMDLPSVVESHKTFDNSTHFKSADIHQVLVVRNPNDTPPDNERLVDGLTPASKGAGVRNSIGKSDEDAEKLAAVEAQIKYVVDHKVSFVQKK 157          
BLAST of Ggra6731.t1 vs. uniprot
Match: A0A5J4Z6X8 (Transcription initiation factor TFIID subunit 7 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z6X8_PORPP)

HSP 1 Score: 134 bits (337), Expect = 4.780e-32
Identity = 78/177 (44.07%), Postives = 107/177 (60.45%), Query Frame = 0
Query:    1 MNEQQYILRLPQPLVEPMRFAL---------SSNKKREGAGEDRK--------PSKFQINFKDERNAVFTIDGKDYPASLMDLPCIVETHKTADKRTFYKSGDLHQVLVVRMPDETPPKETYLPDGVTPATRGAAARLKPPKRFFTRDEVELIERRIKYVIDHKTSFTQKKTQENPT 160
            M+E+Q+ILRL   L + MR  L         S +    GA ++ +        P KF+I F  ER+A  T+DG+ YPA+LMDLPCIVE+HK+ DK   +KS D+HQVLVVR   E  P++  L +G+T A++GA  R + P   FT D+V  +E +IKYV DH+ +F QK   E PT
Sbjct:    1 MDEEQFILRLTPKLAQRMRVLLGKTGTVPSSSLSASPTGAPDEVRNDAPPLPLPPKFEIQFLSERHAAVTVDGEAYPATLMDLPCIVESHKSPDKSLLFKSCDIHQVLVVREHSEPAPEDFQLQNGLTMASKGARERFRVPDPPFTHDQVSSVEVKIKYVTDHRVAFVQKPA-ETPT 176          
BLAST of Ggra6731.t1 vs. uniprot
Match: D7G280 (TAFII55_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G280_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 5.610e-17
Identity = 58/151 (38.41%), Postives = 82/151 (54.30%), Query Frame = 0
Query:    4 QQYILRLPQPLVEPMRFALSSNKKREGAGEDRKPSKFQINFKDERNAVFTIDGKDYPASLMDLPCIVETHKTADKRTFYKSGDLHQVLVVRMPDETPPKET----------YLPDGVTPATRGAAAR----LKPPKRFFTRDEVELIERRI 140
            +Q +LRLP  L E MR  ++++   EG   D  P K     K  R   FT+DGK YPA L+D+PC++ET KT DKRTF+KSGD+ Q+L+V   +    K+             PDG+TP T+    R     +P +  F R EV  +E ++
Sbjct:    6 RQLVLRLPDGLKEAMRERVAADTGMEGV--DFTPEK-----KGSRRFTFTMDGKKYPARLVDMPCVLETQKTLDKRTFFKSGDVGQMLIVYKDENAYKKDDGNASGVGPQRLYPDGLTPPTKNIVRRRFVKARPDRGKFDRAEVIRVESQV 149          
BLAST of Ggra6731.t1 vs. uniprot
Match: M2Y8M0 (Transcription initiation factor TFIID, subunit TAF7 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y8M0_GALSU)

HSP 1 Score: 85.5 bits (210), Expect = 5.940e-15
Identity = 54/159 (33.96%), Postives = 83/159 (52.20%), Query Frame = 0
Query:    2 NEQQYILRLPQPLVEPMRFALSSNKKREGAGEDRKPSKFQINFKDERNAVFTIDGKDYPASLMDLPCIVETHKTADKRTFYKSGDLHQVLVVRMPDETPPKETY--------LPDGVTPATRGAAARLKPPKRFFTRDEVELIERRIKYVIDHKTSFTQ 152
            +EQQ ILRLP  L   ++  L     +  +G+      +QI F D R+A+F  DGK Y A L+DLPC+VE+    + +  YK+ D+HQVL V   + TP +E          L DG+T  T+GA  R +     ++ + V  +E  +K V + K +  +
Sbjct:   17 DEQQVILRLPPALASRVQLQLDD---KLASGQQVLELPYQIEFIDNRHALFRYDGKTYAAVLLDLPCVVESSTLGETKKLYKNLDVHQVLQV---ESTPIEEAVEKTETDFCLEDGITHVTKGAKTRFRKDLPEYSAERVSYVEGLMKNVFELKYNLVK 169          
BLAST of Ggra6731.t1 vs. uniprot
Match: A0A397DDH0 (TAFII55_N domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DDH0_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 2.620e-14
Identity = 50/120 (41.67%), Postives = 69/120 (57.50%), Query Frame = 0
Query:    4 QQYILRLPQPLVEPMRFALSSNKKREGAGEDRKPSKFQINFKDERNAVFTIDGKDYPASLMDLPCIVETHKTADKRTFYKSGDLHQVLVVR-MPDETPPKETY--LPDGVTPATRGAAAR 120
            +QY+LR+P+ + E +R  ++    +E  G D       +   D RN  F ID  + PA+L  LPCIVETHKT D++ FYKSGD+ Q+L+V   P+E    ET   LP G+TP T     R
Sbjct:    3 EQYLLRVPKRVGEELRKKMAE---KEVRGVD------VVAGADNRNFKFRIDDTELPATLCQLPCIVETHKTYDEKLFYKSGDIGQILLVHDTPEEQMLYETVTELPGGITPPTTNIVKR 113          
BLAST of Ggra6731.t1 vs. uniprot
Match: A0A024UIK8 (TAFII55_N domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UIK8_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 9.360e-14
Identity = 53/140 (37.86%), Postives = 76/140 (54.29%), Query Frame = 0
Query:    4 QQYILRLPQPLVEPMRFALSSNKKREGAGEDRKPSKFQINFKDERNAVFTIDGKDYPASLMDLPCIVETHKTADKRTFYKSGDLHQVLVVR-MPDETPPKETY--LPDGVTPATRGAAARLKPPKR---FFTRDEVELIE 137
            +QY+LR+P+ +   +R  ++    +E  G D       +   D RN  F ID  + PA+L  LPCIVETHKT D++ FYKSGD+ Q+L+V   P+E    ET   LP G+TP T     R     R    F +++V  +E
Sbjct:    3 EQYLLRVPKKVAVDLRKKMAE---KEVRGVD------VVAGADNRNFKFRIDDTELPATLCQLPCIVETHKTYDEKLFYKSGDIGQILLVHDTPEEQMLYETVTELPGGITPPTTNIVKRKYAKTRKNPIFPKNDVARVE 133          
BLAST of Ggra6731.t1 vs. uniprot
Match: A0A7S3M9W3 (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M9W3_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.560e-13
Identity = 50/126 (39.68%), Postives = 66/126 (52.38%), Query Frame = 0
Query:    2 NEQQYILRLPQPLVEPMRFALSSNKKREGAGEDRKPSKFQINFKDERNAVFTIDGKDYPASLMDLPCIVETHKTADKRTFYKSGDLHQVLVVRMPDETPPKET-------------YLPDGVTPAT 114
             +Q  ILRLP+PL    R  L+S+KK+     + KP             +F ++GK+YPA LM+LP IVETHKT D + F KSGD+ QVL V    ET  +               Y+P G+TP T
Sbjct:   19 QQQHLILRLPEPLARLSRKLLNSDKKKTSPMVEVKPEDASTM---SNEFIFIMNGKEYPALLMNLPTIVETHKTFDNKIFLKSGDIGQVLQVF---ETAAERDVMRGQICKTINGDYMPSGLTPPT 138          
BLAST of Ggra6731.t1 vs. uniprot
Match: A0A484LHF6 (TAFII55_N domain-containing protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484LHF6_9ASTE)

HSP 1 Score: 77.0 bits (188), Expect = 2.190e-13
Identity = 45/118 (38.14%), Postives = 64/118 (54.24%), Query Frame = 0
Query:    3 EQQYILRLPQPLVEPMRFALSSNKKREGAGEDRKPSKFQINFKDERNAVFTIDGKDYPASLMDLPCIVETHKTADKRTFYKSGDLHQVLVVRMPDETPPKETYLPDGVTPATRGAAAR 120
            E+Q+ILR+P  + E +   LS N   E  G D   S+      D R+  F I  + +PASL+DLPCIVE++KT D     K+ D+ Q+++VR   +  P E     G+TP  R A  R
Sbjct:    2 EEQFILRVPPSVAEQIDRLLSENASSEDTGLDLTFSE------DGRSGTFVIGNERFPASLLDLPCIVESYKTYDDNVLIKTADIGQMIMVREEGDPAPDEAEYRHGLTPPMRDARRR 113          
BLAST of Ggra6731.t1 vs. uniprot
Match: A0A484L114 (TAFII55_N domain-containing protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484L114_9ASTE)

HSP 1 Score: 77.0 bits (188), Expect = 3.240e-13
Identity = 45/118 (38.14%), Postives = 64/118 (54.24%), Query Frame = 0
Query:    3 EQQYILRLPQPLVEPMRFALSSNKKREGAGEDRKPSKFQINFKDERNAVFTIDGKDYPASLMDLPCIVETHKTADKRTFYKSGDLHQVLVVRMPDETPPKETYLPDGVTPATRGAAAR 120
            E+Q+ILR+P  + E +   LS N   E  G D   S+      D R+  F I  + +PASL+DLPCIVE++KT D     K+ D+ Q+++VR   +  P E     G+TP  R A  R
Sbjct:    2 EEQFILRVPPSVAEQIDRLLSENASSEDTGLDLTFSE------DGRSGTFVIGNERFPASLLDLPCIVESYKTYDDNVLIKTADIGQMIMVREEGDPAPDEAEYRHGLTPPMRDARRR 113          
The following BLAST results are available for this feature:
BLAST of Ggra6731.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJD71.370e-14682.25Transcription initiation factor TFIID subunit 7 n=... [more]
A0A7S1EPS71.730e-3547.13Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4Z6X84.780e-3244.07Transcription initiation factor TFIID subunit 7 n=... [more]
D7G2805.610e-1738.41TAFII55_N domain-containing protein n=2 Tax=Ectoca... [more]
M2Y8M05.940e-1533.96Transcription initiation factor TFIID, subunit TAF... [more]
A0A397DDH02.620e-1441.67TAFII55_N domain-containing protein n=2 Tax=Aphano... [more]
A0A024UIK89.360e-1437.86TAFII55_N domain-containing protein n=1 Tax=Aphano... [more]
A0A7S3M9W31.560e-1339.68Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A484LHF62.190e-1338.14TAFII55_N domain-containing protein n=1 Tax=Cuscut... [more]
A0A484L1143.240e-1338.14TAFII55_N domain-containing protein n=1 Tax=Cuscut... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 297..317
NoneNo IPR availableCOILSCoilCoilcoord: 327..354
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..191
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 203..248
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..275
IPR006751TAFII55 protein, conserved regionSMARTSM01370TAFII55_N_2coord: 2..164
e-value: 1.5E-25
score: 100.9
IPR006751TAFII55 protein, conserved regionPFAMPF04658TAFII55_Ncoord: 3..101
e-value: 1.2E-23
score: 83.6
IPR006751TAFII55 protein, conserved regionCDDcd08047TAF7coord: 3..140
e-value: 1.68201E-28
score: 106.584
IPR037817Transcription initiation factor TFIID subunit 7PANTHERPTHR12228TRANSCRIPTION INITIATION FACTOR TFIID 55 KD SUBUNIT-RELATEDcoord: 3..352

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:315466..316530 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6731.t1Ggra6731.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 315466..316530 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6731.t1 ID=Ggra6731.t1|Name=Ggra6731.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=355bp
MNEQQYILRLPQPLVEPMRFALSSNKKREGAGEDRKPSKFQINFKDERNA
VFTIDGKDYPASLMDLPCIVETHKTADKRTFYKSGDLHQVLVVRMPDETP
PKETYLPDGVTPATRGAAARLKPPKRFFTRDEVELIERRIKYVIDHKTSF
TQKKTQENPTEEEEVVIEEETVNAQPGKNAADPTKSAANGDATGTAPRAG
KPPLPSESLPAPMPTDVLPSPAVDTPGPYTPQPFTPQPFTPTPFTPIDTP
GPDGEEDEDDDDDDDDDDDDAINADMADMVDQIMEDKEDIAKRRIERLKL
DQSIKEQKAKIADLEEKAEKAPNPVLKKRFLSKRPELQTELTELEKRRQE
LGEE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006751TAFII55_prot_cons_reg
IPR037817TAF7