Ggra6716.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6716.t1
Unique NameGgra6716.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length723
Homology
BLAST of Ggra6716.t1 vs. uniprot
Match: A0A2V3IJT6 (DNA polymerase I B, chloroplastic/mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJT6_9FLOR)

HSP 1 Score: 516 bits (1330), Expect = 9.930e-171
Identity = 287/695 (41.29%), Postives = 425/695 (61.15%), Query Frame = 0
Query:   20 RKTVTSTALATPQERSGIDGLHRQISIVDDVRTASKAIEALLSLPEGTPVAWSSQALLPRTSSAMVTLCGYTGDTLQNGTWTFICPSSRHETAVWELMREYFRDEGTKLICFDRNHFSRHLQSRDIQASGYIHDVQTMIRMSGLKEKGFDAYVKSILDKRTTSKREAFFSGHDRPWETPSSEVALSSDEWISPAC-ADAHAVFHIYQRMKKKMLKKGAISAEANNSFEAYEQFYALIDQSLGRIGKQRLFLNEDTLSDVLTRFEYDRMSQQSIFERWAVQYCDEVSQVEMSSP-MLRHLLFAPYQNKYNMNEKIPTEKVFAGRQRIAGRHDTTSDSKRSRARKRKVSIRGAGLVAQKHASNGVPSVSIPALQTLLATFSSSEDEELREACSAINGLLNAKAAKLASQNFEKRVEQVVDSDRQIRPRITVDFERGRLQTNVSSNVLELLRAKKDHELLLLDFENLSLCALADLSGCERLKKRLRLKDAAHAYLAKEFSKEISNALYDGSCVLRGEG-VTVENAFPEKFLMAKMLDTCMSKGPRIEIVKKVMKCDQARALQLVQGWFQVHPVVRSWCEQEESRMRDRKVAETIRGRQRALKIGRGKRGTFSVNEGMTFAIEGSAGDFMMQSVLKLVESERINALRWQVALANDDRIVLHGPSWSAEEASAAVVDTLTSFNDGAPIIESALHQLKVLR 711
            ++  +S A   P + +      +Q S++DD R ASK IEALL LP+ TPVAWS+QA    TS  M ++C Y GD+ ++G + +I P S  E+AVW L REYFRDE TK +CFD   F+  LQSR I+A G +HDVQ MIRM G + K  +A  +S+L+KRT  +R + F               +S+D+    +C ADAH +FH+Y  + K+M KK  +S  ANN+FEAY++FYA +++ L  +GKQ L ++ + ++++ + FE +  +++++FE+WAV +C + + V ++SP MLRHLLFAPY N ++  + +  E+ F+ R    G  +     K+ +A K+++ IRGAGL AQ    NGVPSVS  ALQ +++T   S+D  +  AC AI  LL  + A    + FEK V + VD+D  + P   +DFE G +++N+S +V +++RAK  +EL++++  N+ LCALA++SGCE L+ R+   +A H  LA+EFS+EI  A+ +G CVL G G V V   +P+K  MA+MLD CM++G R+  VK  M CD  R  +LV+ W  VHP VR W E+       R+VAET+ G+QRA++ G GKR    V EG+ FA+  SA D ++     L   + + AL W+VAL +  R+ L G S SA  A  AV   L     GA +    + QL++ R
Sbjct:   50 KRLCSSAAATAPVQHNQKHERPKQWSVIDDARKASKTIEALLRLPDDTPVAWSTQATSTATSPPMTSMCAYAGDSFEHGAYIYIRPQSTQESAVWALFREYFRDELTKSVCFDVRCFTNDLQSRGIRAHGRVHDVQAMIRMYGRQAKHIEACCESLLNKRTRDRRTSMFGD-------------VSADKQSIQSCHADAHGIFHLYHDVAKRMRKKALLSNFANNTFEAYDKFYARVEKKLAEMGKQDLQVDSELMNEMKSGFEREGQAERAVFEKWAVGHCTDGTAVNLTSPTMLRHLLFAPYTNVHDKTQSVGAERTFSVRVGGGGGAEDGKGVKKGKAVKKRIVIRGAGLGAQTWTRNGVPSVSTSALQKVVSTIEKSDDAAVESACRAICALLKWQEAGRKWERFEKSVLKAVDNDGLVLPSTRIDFESGAIESNLSRHVYDVVRAKSGNELMVVELNNVKLCALAEVSGCEVLRARVAQGEALHTLLAREFSREIQAAVLEGHCVLNGGGGVKVSQKYPQKVRMARMLDWCMTRGGRLHDVKSAMGCDDERGRRLVRAWLNVHPGVRRWVERGMKGTGGRRVAETVCGQQRAVRGGGGKRAEARVAEGVAFAVSASARDVVLCVADTLWSDDLVRALGWRVALVDARRVALCGASHSAPAAIDAVRRALWRAG-GAGVTARVMAQLRITR 730          
BLAST of Ggra6716.t1 vs. uniprot
Match: A0A6A4LLM6 (POLAc domain-containing protein (Fragment) n=1 Tax=Rhododendron williamsianum TaxID=262921 RepID=A0A6A4LLM6_9ERIC)

HSP 1 Score: 116 bits (291), Expect = 5.400e-23
Identity = 125/557 (22.44%), Postives = 234/557 (42.01%), Query Frame = 0
Query:  209 WISPACADAHAVFHIYQRMKKKML-KKGAISAEANNSF-EAYEQFYALIDQSLGRIGKQRLFLNEDTLSDVLTRFEYDRMSQQSIFERWAVQYCDEVSQVEMSSP-MLRHLLFAPYQNKYNMNEKIPTEKVFAGRQRIAGRHDTTSDSKRSRARKRKVSI--RGAGLVAQKHASNGVPSVSIPALQTLLATFSS-----------------SEDEEL---------------REACSAINGLLNAKAAKLASQNFEKRVE--QVVDSDRQIRPRITVDFERGRLQTNVSS------------NVLELLRAKKDHELLLLDFENLSLCALADLSGCERLKKRLRLKDAAHAYLAKEFSKEISNALYDGSCVLR-----GEGVT----VENAFPEKFLMAKMLDTCMSKGPRIEIVKKVMKCDQARALQLVQGWFQVHPVVRSWCEQEESRMRDRK-VAETIRGRQRAL----KIGRGKRGTFSVNEGMTFAIEGSAGDFMMQSVLKLVESERINALRWQVALANDDRIVLHGPSWSAEEASAAVVDTLTSFNDGAPII 700
            WI  +  D+ +  ++Y+ +K+K+L  +  +      +  + YE+++    + L  +  + + +N   L++V      ++    + F  WA +YC +   + + S   LR LLF    N  + NE +P EK F    ++        + K++  + R + +    + L  + + ++G PSV   AL+TL    SS                 SED+E                +EAC AI  L    +      NF   ++   +   + +I   + ++ E GRL     S             + +   A   + L++ D+  L L  LA L+ C+ +    +     H+  A      I  A+   S +L      GE       +++AF  +   AKML+  ++ G     + +  K     A + V  W+     VR+W ++ +     +K    T+ GR R      ++   +RG       +   ++GSA D  M ++L++ ++ R+  L W++ L   D ++L GP+ SAEEA A VV+ ++   DG  I+
Sbjct: 1174 WICYSALDSISTLNLYESLKRKLLGMEWKVDGHIEGTMLDFYEKYWQPFGELLVTMETEGMLVNRAYLAEVEKVARAEQQVAANRFRNWASKYCPDAKYMNVGSDTQLRXLLFGGTLNSKDQNESLPLEKDF----KVPNIEKVIEEGKKTPTKFRNIKLCRLESKLEPEMYTASGWPSVCGDALKTLAGKVSSEFDFTDEAQVLETKEGVSEDKEAAYGTAYAAFGGGLKGKEACHAIAALCEVCSIDSLISNFILPLQGSHISGKNGRIHGSLNINTETGRLSARRPSLQNQPALEKDRYKIRQAFVAAPGNSLIVADYGQLELRILAHLANCKSMLDAFKAGGDFHSRTAMNMYPHIREAVEQKSVLLEWHPQPGEDKPPVPLLKDAFASERRKAKMLNFSIAYGKTPVGLSRDWKVSVKEAKETVARWYNERKEVRNWQDERKKEACSKKRCVHTLLGRARLFPSVDRVTSSQRGHIE-RAAINTPVQGSAADVAMCAMLEISKNLRLKXLGWRMLLQVHDEVILEGPTESAEEAKAIVVECMSKPFDGKNIL 1725          
BLAST of Ggra6716.t1 vs. uniprot
Match: A0A834GV69 (POLAc domain-containing protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834GV69_RHOSS)

HSP 1 Score: 112 bits (281), Expect = 6.970e-22
Identity = 123/557 (22.08%), Postives = 233/557 (41.83%), Query Frame = 0
Query:  209 WISPACADAHAVFHIYQRMKKKM--LKKGAISAEANNSFEAYEQFYALIDQSLGRIGKQRLFLNEDTLSDVLTRFEYDRMSQQSIFERWAVQYCDEVSQVEMSSP-MLRHLLFAPYQNKYNMNEKIPTEKVFAGRQRIAGRHDTTSDSKRSRARKRKVSI--RGAGLVAQKHASNGVPSVSIPALQTLLATFSS-----------------SEDEEL---------------REACSAINGLLNAKAAKLASQNFEKRVE--QVVDSDRQIRPRITVDFERGRLQTNVSS------------NVLELLRAKKDHELLLLDFENLSLCALADLSGCERLKKRLRLKDAAHAYLAKEFSKEISNALYDGSCVLR-----GEGVT----VENAFPEKFLMAKMLDTCMSKGPRIEIVKKVMKCDQARALQLVQGWFQVHPVVRSWCEQEESRMRDRK-VAETIRGRQRAL----KIGRGKRGTFSVNEGMTFAIEGSAGDFMMQSVLKLVESERINALRWQVALANDDRIVLHGPSWSAEEASAAVVDTLTSFNDGAPII 700
            WI  +  D+ +  ++Y+ +K+K+  ++            + YE+++    + L  +  + + ++   LS+V      ++    + F  WA +YC +   + + S   LR LLF    N  + NE +P EK F    ++        + K++  + R + +    + L  + + ++G PSV   AL+TL    S+                 SED+E                +EAC AI  L    +      NF   ++   +   + +I   + ++ E GRL     S             + +   A   + L++ D+  L L  LA L+ C+ +    +     H+  A      I  A+   S +L      GE       +++AF  +   AKML+  ++ G     + +  K     A + V  W+     VR+W ++ + +   +K    T+ GR R      ++   +RG       +   ++GSA D  M ++L++ ++ R+  L W++ L   D ++L GP+ SAEEA A VV+ ++   DG  I+
Sbjct:  580 WICYSALDSISTLNLYESLKRKLSGMEWKVDGCIEGTMLDFYEKYWQPFGELLVTMETEGMLVDRAYLSEVEKVARAEQQVAANRFRNWASKYCPDAKYMNVGSDTQLRLLLFGGTLNSKDQNESLPLEKDF----KVPNIEKVIEEGKKTPTKFRNIKLCRLESKLEPEMYTASGWPSVCGDALKTLAGKVSAEFDFTDEAQVLETKEGVSEDKEAAYGTAYAAFGGGLKGKEACHAIAALCEVCSIDSLISNFILPLQGSHISGKNGRIHGSLNINTETGRLSARRPSLQNQPALEKDRYKIRQAFVAAPGNSLIVADYGQLELRILAHLANCKSMLDAFKAGGDFHSRTAMNMYPHIREAVEQKSVLLEWHPQPGEDKPPVPLLKDAFASERRKAKMLNFSIAYGKTPVGLSRDWKVSVKEAKETVARWYNERKEVRNWQDERKKQACSKKRCVHTLLGRARLFPSVDQVTSSQRGHIE-RAAINTPVQGSAADVAMCAMLEISKNLRLKELGWRLLLQVHDEVILEGPTESAEEAKAIVVECMSKPFDGKNIL 1131          
BLAST of Ggra6716.t1 vs. uniprot
Match: A0A4Y7JX15 (POLAc domain-containing protein n=6 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7JX15_PAPSO)

HSP 1 Score: 110 bits (275), Expect = 1.850e-21
Identity = 120/540 (22.22%), Postives = 226/540 (41.85%), Query Frame = 0
Query:  209 WISPACADAHAVFHIYQRMKKKMLKKGAI--SAEANNSFEAYEQFYALIDQSLGRIGKQRLFLNEDTLSDVLTRFEYDRMSQQSIFERWAVQYCDEVSQVEMSSP-MLRHLLFAPYQ-NKYNMNEKIPTEKVFAGRQRIAGRHDTTSDSKRSRARKRKVSIRGAG--LVAQKHASNGVPSVSIPALQTLLATFSSSEDEEL------------------REACSAINGLLNAKAAKLASQNFEKRVEQ--VVDSDRQIRPRITVDFERGRL---------QTNVSSNVLELLRA---KKDHELLLLDFENLSLCALADLSGCERLKKRLRLKDAAHAYLAKEFSKEISNALYDGSCVLR-----GEGVTVENAFPEKFLM----AKMLDTCMSKGPRIEIVKKVMKCDQARALQLVQGWFQVHPVVRSWCEQEESRMRDRKVAETIRGRQRALKIGRGKRGTFSVNEGMTFA-----IEGSAGDFMMQSVLKLVESERINALRWQVALANDDRIVLHGPSWSAEEASAAVVDTLTSFNDG 696
            WI  +  D+ +   +Y+ ++KK+     I    E  N ++ YE+++    + L  +  + + +N + L+D+       +      F +WA + C +   + + S   LR L F     +  + ++ +  EK F    ++        + K+   + RK+++   G  + A+     G PSVS   L+ L    +S   E++                  REAC AI  L    A      NF   ++   +   D +I   + ++ E GRL         Q  +  ++ ++ +A     ++ L++ D+  L L  LA L+ C+ +    +     H+  A      I  A+     +L      GE         +KF      AKML+  ++ G   + + K  K     A + V  W++    V +W E+ +   +     +T+ GR R          ++ V   +  A     ++GSA D  M ++L++V++ R+  L W++ L   D ++L GP+ SAEEA A VV+ ++   DG
Sbjct:   91 WICYSSLDSISTLKLYESLEKKLKAMEWILDGIEKGNMYDFYEEYWRPFGEILVNMETEGMLVNREALADMEKLAIVHQQVAGDKFRQWASKMCPDALYMNIGSDTQLRQLFFGGMTISSKDGSQTLDEEKEF----KVPNVDKVIEEGKKVATKFRKITLHKIGNEIKAEIFTPTGRPSVSGDVLKVLAGRVTSEYKEDIDVSQYGTAYEAFGEGKDGREACHAIAALCEVCAIDSLISNFILPLQSSAISGKDGRIHCSLNINTETGRLSARRPNLQNQPALEKDIYKIRQAFVAGDNNSLIVADYGQLELRILAHLADCKSMLDAFKAGGDFHSRTAINMYPHIRKAVEQNEVLLEWYPQPGEEKPPVQLLKDKFASERRKAKMLNFSIAYGKTPQGLAKDWKVTVKEATETVNLWYKQRQEVLAWQEERKKEAKKEGCVKTLLGRARCFPSM--SSASYGVKRHIERAAINTPVQGSAADVAMCAMLEIVKNARLKELGWRLLLQVHDEVILEGPTGSAEEAKAIVVNCMSKPFDG 624          
BLAST of Ggra6716.t1 vs. uniprot
Match: DNA polymerase I A, chloroplastic-like n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D6322C (DNA polymerase I A, chloroplastic-like n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D6322C)

HSP 1 Score: 109 bits (273), Expect = 5.980e-21
Identity = 120/573 (20.94%), Postives = 241/573 (42.06%), Query Frame = 0
Query:  198 PSSEVALSSDE-WISPACADAHAVFHIYQRMKKKMLKKGAI--SAEANNSFEAYEQFYALIDQSLGRIGKQRLFLNEDTLSDVLTRFEYDRMSQQSIFERWAVQYCDEVSQVEMSSPM-LRHLLFAPYQNKYNMNEKIPTEKVFAGRQRIAGRHDTTSDSKRSRARKRKVSIRGA--GLVAQKHASNGVPSVSIPALQTLLATFSSS----------EDEEL-------------------------REACSAINGLLNAKAAKLASQNFEKRVEQ--VVDSDRQIRPRITVDFERGRLQTNVSSNVLELLRAKKD-------------HELLLLDFENLSLCALADLSGCERLKKRLRLKDAAHAYLAKEFSKEISNALYDGSCVLRGEGVT---------VENAFPEKFLMAKMLDTCMSKGPRIEIVKKVMKCDQARALQLVQGWFQVHPVVRSWCEQEESRMRDRKVAETIRGRQRALK----IGRGKRGTFSVNEGMTFAIEGSAGDFMMQSVLKLVESERINALRWQVALANDDRIVLHGPSWSAEEASAAVVDTLTSFNDGAPIIE 701
            P  E+   + E WI  +  D+ +   +Y+ +K K+  +  +         ++ YEQ++      L ++  + + ++   LS++      +R      F +WA +YC +   + + S + +R LLF   +N++   E  P  K F    ++    +  ++ K++ ++   + + G    L   K    G P  S  AL++L     +           +DE+                          +EAC AI  L        +  NF  ++++  +  ++ +I   + ++ E GRL    + N+  +   +KD             + L++ D+  L L  LA L+ C+ +    +     H+  A    + I +A+++   +L               +++AF  +   AKML   ++ G   E + + +K  +  A   +  W++    V +W + ++   R++    T+ GR R       I  GKR   ++N      ++GSA D  M ++L++  + R+  L W++ L   D ++L GPS SAEEA A VV+ ++    G  I++
Sbjct:  461 PVKELQREARELWICYSSLDSVSRLRLYESLKSKLETRRWVLDGYPRGTMYDFYEQYWRPFGALLVKMETEGMLVDRGYLSEIEKTAIAERQLTADKFRKWASKYCPDAKYMNVKSAIQIRQLLFGGIKNRHRPGETWPQSKTF----KVLNEENVATEGKKT-SKYHTIELYGIVEDLKTDKFTPIGWPKTSADALRSLAGEIPTKYIYTMDDIQEDDEDTSGSENPDGDSSYGTAYEAFGGGKNGKEACHAIAALHETSFIGSSISNFILKLQRDHISCAEGRIHCSLNINTETGRLSAR-TPNLQNIPAFEKDRYKIRQAFVAAPGNSLIVADYGQLELRILAHLTNCKSMLDAFKAGGDFHSRTAMNMYQHIRDAVHEKKVLLEWHPQPGQEKPPVPLLKDAFGAERRKAKMLSFSIAYGKTEERLSEDLKVSKEEARDTLNLWYRDRQEVFAWQKIQKKLAREKCEVYTLLGRSRHFPNLTWIDPGKRERAAINA----PVQGSAADVAMCAMLEIERNARLKELGWRLLLQVHDELILEGPSESAEEAKAIVVECMSKPFYGTNILK 1023          
BLAST of Ggra6716.t1 vs. uniprot
Match: A0A8J4Q4E5 (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q4E5_9MYCE)

HSP 1 Score: 102 bits (255), Expect = 1.010e-18
Identity = 155/734 (21.12%), Postives = 291/734 (39.65%), Query Frame = 0
Query:   31 PQERSGIDGLH-RQISIVDDVRTASKAIEALLSLP------EGTPVAWSSQALLPRTSSAMVTLCGYTGDTLQNGT----WTFICPSSRHETAVWELMREYFRDEGTKLICFDRNHFSRH-LQSRDIQASGYIHDVQTMIRMSGLKEK------GFDAYVKSILDKRTTSKREAFFSGH-DRPWETPSSEVA-----LSSDE-----WISPACADAHAVFHIYQRMKKKMLKKGAISAEANNSFEAYEQFYALIDQSLGRIGKQRLFLNEDTLSDVLTRFEYDRMSQQSIFERWAVQYCDEVSQVEMSSP-MLRHLLFAPYQNKYNMNEKIPTEKVFAGRQRIAGRHDTTSDSKRSRARKRKVSIRGAGLVAQKHASNGVPSVSIPALQTLLAT------FSSS---------EDEEL-----REACSAINGLLNAKAAKLASQNFEKRVEQVVDSDRQIRPRITVDFERGRLQTNVSSNVLELLRAKKD-------------HELLLLDFENLSLCALADLSGCERLKKRLRLKDAAHAYLAKEFSKEISNALYDGSCVLRGEG------VTVENAFPEKFLMAKMLDTCMSKGPRIEIVKKVMKCDQARALQLVQGWFQVHPVVRSWCEQEESRMRDRKVAETIRGRQRALK-IGRGKRGTFSVNE--GMTFAIEGSAGDFMMQSVLKLVESERINALRWQVALANDDRIVLHGPSWSAEEASAAVVDTLTS 692
            P     ID L  + +++V +V  A + +E LLSL       +   V    +   P     ++    Y G  +  G     W  +    + +  + E+ R YF DE    +  +   F RH L + DI   G+  D   M R+              +A  K +L+    + ++ F S    R  E   + V      +  D+     WI  +  DA   + + + +  K+L          N ++ Y   +      L  + K+ + ++   L  +  + + D    +  F  WA ++      +   S   ++ LLFAP  NK    E +P EK F     +    +     K    +K K  + G GL ++   ++G PSV   +L+ L  +      + S+         ED+E      REAC AIN LL   +      +F   ++++ DS+ ++   + ++ E GRL +    N+      +KD             + L++ D+  L L  LA ++ C+ +     +    H+  A      +  A+  G  +L  +G        ++N +  +   AK L+  ++ G     + +        A + +  W++  P V  W  +        K   T+ GR R L  I    +G  +  E   +   ++G A D +M+++L + E+ R+  L +++ +   D ++L GP  +A+EA   VV  +++
Sbjct:  590 PISNEEIDQLKPKNVTMVRNVEQAKRVVEKLLSLKNVFHACDTEVVDLDLKKESPIGHGKVICFSIYCGPDIDFGNGPRIWVDVMDDIQGK-EILEVFRPYFEDEQILKVWHNYG-FDRHILNNHDINVVGFGGDTIHMARLWDASRTTNGSGYSLEALSKELLENPKITIKDLFGSKKIKRDGEEGKAIVVPPLEFIQRDKKFIQPWIEYSSLDAELTWKLRENLHLKLLDMEW--TPGTNMWDFYYLMWRPFGHLLTEMEKRGMKIDIPYLKTLEEKAQNDIEENRKRFYEWAKKHSPGAEYMNSDSDAQIQQLLFAPVVNK-KTKEALPREKDFECDNVL----NVIEPGKTKAKKKMKFFLHGIGLESKTVTASGWPSVDSQSLRELAGSNPEAGKYGSAFKFFVDKYPEDKERGESEGREACLAINSLLEIGSIGTLINSFILPLQKLADSNSRLHTSVNLNTETGRLSSR-RPNLQNQPALEKDRYKIRAAFTCEPGNTLIVADYGQLELRLLAHITNCKSMINAFHVGGDFHSRTAMGMYPHVKEAIDKGEVLLEWDGDGEPPKPLLKNTYASERRKAKTLNFSIAYGKTPHGLSQDWGVTLKEAQETLNRWYEDRPEVLVWQRRTIETAHRHKWTRTLMGRYRHLPDIDNNAKGMKNHAERASINTPLQGGAADIVMKAMLIIEENTRLKELGFKMIMQIHDELILEGPEENADEARELVVKLMSN 1313          
BLAST of Ggra6716.t1 vs. uniprot
Match: A0A2P6NE06 (DNA-directed DNA polymerase n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NE06_9EUKA)

HSP 1 Score: 101 bits (252), Expect = 2.150e-18
Identity = 160/734 (21.80%), Postives = 285/734 (38.83%), Query Frame = 0
Query:   21 KTVTSTALATPQERSGIDGLHRQISIVDDVRTASKAIEALLSLPE--------GTPVAWSSQALLPRTSSAMVTLCGYTGDTLQNGTWTFICPSSRHET-AVWELMREYFRDEGTKLICFDRNHFSRHLQSRDIQASGYIHDVQTMIRM-----------------SGLKEKGFDAYVKSILDKRTTSKREAFFSGHDRPWETPSSEVALSSD-----EWISPACADAHAVFHIYQRMKK---KMLKKGAISAEANNSFEAYEQFYALIDQSLGRIGKQRLFLNEDTLSDVLTRFEYDRMSQQSIFERWAVQYCDEVSQVEMSS-PMLRHLLFAPYQNKYNMNEKIPTEKVFAGRQRIAGRHDTTSDSKRSRARKRKVSIRGAGLVAQKHASNGVPSVSIPALQTLLATFSSS-----------EDEELREACSAINGLLNAKAAKLASQNFEKRVEQVVDSDRQIRPRITVDFERGRLQT---NVSSN---------VLELLRAKKDHELLLLDFENLSLCALADLSGCERLKKRLRLKDAAHAYLAKEFSKEISNALYDGSCVL-----RGEGVT--VENAFPEKFLMAKMLDTCMSKGPRIEIVKKVMKCDQARALQLVQGWFQVHPVVRSWCEQEESRMRDRKVAE----TIRGRQRALK-IGRGKRG--TFSVNEGMTFAIEGSAGDFMMQSVLKLVESERINALRWQVALANDDRIVLHGPSWSAEEA 682
            +  TST L TP     ++      S V  VRT  KA E +  L           T V        P     ++ +  Y G  +  G    I   +  E   V +  + Y  DE    +  + +     L++  I+  G + D   M R+                   LK +G D  +K  +  R  S +        +  ETP   + L  D     +WI  +  D    +H  +++++   +M  +   S      ++ Y++ +    + L  I    + ++ D L  V      D    +S F  WA   C     + + S P  + L FAP   K   + ++  E      + +        + K+   +K    IRG G+ A +    G+P+VS   L+ L                  + E  REAC AIN LL A A +     F   ++ + D++ +I   + V+ E GRL +   N+ +          + +   A +   L++ D+  L L  LA ++ C+ + +  +     H+        +IS A+ +G  +L     +GE     +++ +  +   AK L+  ++ G     + K        A + +  W++  P V+ W    +S+  D  + E    T+ GR R L  I   K      S    +   ++G A D ++++++KL +S ++  L W+  L   D I+L GP  +AEEA
Sbjct:  411 EVTTSTLLTTPLSEEDVERCTP--SGVTVVRTREKAREVVAQLMTYRDKTHAIDTEVVDIDLEFSPVGQGKIICISIYCGPNVDFGNGPKIWVDNFGECEGVLDEFKPYLEDETIPKVYHNYSFDYHVLRTAGIEPMGLMGDTMHMARLWDSSRLTRGGYSLQGILEDLKIEGID--LKRSIKDRFASPKIKKDGTPSKIMETPDLRI-LQRDTRYLHDWIDYSTFDTEGTWHAREKLQELLDEMKWREYKSGYQLTMWDFYKKEWQPFAELLVSIEDIGIRVDTDYLKKVEAVALEDYQKFKSKFLEWASTLCPGAKHMNIDSDPQKQQLFFAPATGKKGKSLELEREFERENTEMVI------EEGKKKALKKTTFVIRGIGMPAIEETELGLPAVSSKVLRELAGKNPEEGKYGTAYGFFGKGEAGREACLAINYLLEASATQTLLSTFIVPLQTLTDNNSRIHTSLNVNTETGRLSSRRPNLQNQPALEKDRYKIRKAFTAAEGKSLIVADYGQLELRLLAHITKCQSMIEAFQKGGDFHSRTVIGMYPDISRAVQNGEVLLEWDYSKGEPPVPLLKDKYSSERRKAKTLNFSIAYGKTAMGLSKDWGVSLNEAKETLARWYRDRPEVKEW----QSKTIDTAIREGWTRTLMGRYRLLPDINSSKVALRNHSQRAAINTPLQGGAADVVIRAMVKLHQSTQLRELGWRQVLQVHDEIILEGPEENAEEA 1129          
BLAST of Ggra6716.t1 vs. uniprot
Match: A0A803LSZ9 (POLAc domain-containing protein n=4 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803LSZ9_CHEQI)

HSP 1 Score: 100 bits (250), Expect = 3.550e-18
Identity = 128/559 (22.90%), Postives = 221/559 (39.53%), Query Frame = 0
Query:  209 WISPACADAHAVFHIYQRMKKKMLKKGAISAE--ANNSFEAYEQFYALIDQSLGRIGKQRLFLNEDTLSDVLTRFEYDRMSQQSIFERWAVQYCDEVSQVEMSSP-MLRHLLFAPYQNKYNMNEKIPTEKVFAGRQRIAGRHDTTSDSKR-SRARKRKVSIRGAGLVAQKHASNGVPSVSIPALQTLLATFS-----SSED--------------------------------EELREACSAINGLLNAKAAKLASQNFEKRVE--QVVDSDRQIRPRITVDFERGRLQT---NVSSN---------VLELLRAKKDHELLLLDFENLSLCALADLSGCERLKKRLRLKDAAHAYLAKEFSKEISNALYDGSCVLR-----GEGVT----VENAFPEKFLMAKMLDTCMSKGPRIEIVKKVMKCDQARALQLVQGWFQVHPVVRSWCEQEESRMRDRKVAETIRGRQR---ALKIGRGKRGTFSVNEGMTFAIEGSAGDFMMQSVLKLVESERINALRWQVALANDDRIVLHGPSWSAEEASAAVVDTLTSFNDGAPII 700
            WI  +  D+ +   +Y+ +K K+ K   I       N    YE ++    + L ++  + + ++   LS+V       +      F  W  +YC +   + + S   LR LLF    N+ N NE +PTEK F          D     K+       K+   G+ L    + ++G PSVS  AL+ +    S     SS+D                                +E  EAC AI  L    +      NF   ++   V   + +I   + ++ E GRL     N+ +          + +   A   + L++ D+  L L  LA L+ C+ +K+        H+  A      I +A+     +L      GE       +++AF  +   AKML+  ++ G     + K  K     A + V  W++    V  W E  +     R    T+ GR R   ++      + +      +   ++GSA D  M ++L++  + R+  L W++ L   D ++L GPS SAEEA A VV+ ++   +G  I+
Sbjct:  499 WICYSSLDSMSTLKLYESLKSKLSKMPWIMEGNYRGNMLNFYENYWQPFGRLLVQMETEGMLVDRAYLSEVEKVAIAQQQVAADRFRNWTSKYCPDARYMNVGSDAQLRLLLFGGICNRKNHNEFLPTEKKFKVPNTENVIEDGKKTPKKYCDITLHKI---GSSLQTDFYTASGWPSVSGDALKAIAGKVSAEYDFSSDDVEDPLNDDLQNSERKDVDISAYGTAYAAFGGGQEGMEACHAIASLCEVCSIDSLISNFILPLQGSHVSGKNGRIHCSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFVASPGNSLIVADYGQLELRILAHLADCKSMKEAFEAGGDFHSRTAMNMYPYIRDAVQQEEVILEWHPQPGEEKPPVPLLKDAFGSERRKAKMLNFSIAYGKTPMGLAKDWKVSVKEAKETVDLWYKERQEVLKWQEARKKEAAKRGCVHTLLGRARRFPSMAHASPPQRSHIERAAINTPVQGSAADVAMCAMLEIDTNNRLKELGWKLLLQVHDEVILEGPSESAEEAKALVVECMSKPFNGRNIL 1054          
BLAST of Ggra6716.t1 vs. uniprot
Match: A0A200QLZ0 (DNA-directed DNA polymerase n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200QLZ0_9MAGN)

HSP 1 Score: 100 bits (248), Expect = 6.580e-18
Identity = 124/585 (21.20%), Postives = 236/585 (40.34%), Query Frame = 0
Query:  172 VKSILDKRTTSKREAFFSGHDRPWETPSSEVALSSDE---WISPACADAHAVFHIYQRMKKKMLKKGAI--SAEANNSFEAYEQFYALIDQSLGRIGKQRLFLNEDTLSDVLTRFEYDRMSQQSIFERWAVQYCDEVSQVEMSSP-MLRHLLFAPYQNKYNMNEKIPTEKVFAGRQRIAGRHDTTSDSKRSRARKRKVSIRGAG--LVAQKHASNGVPSVSIPALQTLLATFSSSED---EELREACSAINGLLNAKAAKLAS---------------------------QNFEKRVEQVVDS--DRQIRPRITVDFERGRLQT---NVSSN---------VLELLRAKKDHELLLLDFENLSLCALADLSGCERLKKRLRLKDAAHAYLAKEFSKEISNALYDGSCVLR-----GEGVT----VENAFPEKFLMAKMLDTCMSKGPRIEIVKKVMKCDQARALQLVQGWFQVHPVVRSWCEQEESRMRDRKVAETIRGRQRAL----KIGRGKRGTFSVNEGMTFAIEGSAGDFMMQSVLKLVESERINALRWQVALANDDRIVLHGPSWSAEEASAAVVDTLT 691
            +K+I  KR   K      G +    T +    L  +E   WI  +C D+ +   +++ +K K++    I    +  + ++ YE+++    + L ++  + + ++   L+DV      ++    + F  WA Q C +   + + S   LR L F    N+ N NE +  EK F    ++        + K+   + RK++++  G  +  +   S+G PSVS   L+ L    SS  D   ++     S  +   ++     A+                            NF   ++  V S  D ++   + ++ E GRL     N+ +          + +   A   + L++ D+  L L  LA L+ C  +    +     H+  A      I  A+     +L      GE       +++AF  +   AKML+  ++ G     + +  K     A + V  W++    V SW E+ +      +   T+ GR R           ++G       +   ++GSA D  M ++L++  + R+  L W++ L   D ++L GP+ SAEEA A VV+ ++
Sbjct:  601 MKTIFGKRKLKK-----DGSEGKLITIAPVEELQREERINWICYSCLDSMSTLKLFESLKDKLMGMPWILDGCKRGSMYDFYEEYWRPFGELLVKMETEGMLVDRSYLADVEKVAIVEQQIAGNRFRNWASQKCPDALFMNIGSDTQLRQLFFGGIVNRKNPNESLDLEKTF----KVPNVDKVIEEGKKVPTKFRKITLKKIGEEMETEIFTSSGWPSVSGDVLKVLAGKVSSEYDWSGDDFDPTVSEKDIDTSSYGTAYAAFGEGKXXXXXXXXXXXXXXXXXXDSLISNFILPLQSSVISGKDGRVHCSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFVAAPGNSLIVADYGQLELRILAHLANCTSMLDAFKAGGDFHSRTAMNMYPHIREAVDKKQVLLEWHPQPGEEKPPVPLLKDAFASERRKAKMLNFSIAYGKTPVGLSRDWKVSVKEAKKTVDLWYKQRQEVLSWQEERKKEAYKNRCVHTLLGRARCFPSMASASNAQKGHIE-RAAINTPVQGSAADVAMCAMLEISRNSRLKELGWRLLLQVHDEVILEGPTESAEEAKAIVVECMS 1175          
BLAST of Ggra6716.t1 vs. uniprot
Match: DNA polymerase I A, chloroplastic/mitochondrial isoform X1 n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F45BC (DNA polymerase I A, chloroplastic/mitochondrial isoform X1 n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F45BC)

HSP 1 Score: 90.5 bits (223), Expect = 6.430e-15
Identity = 124/560 (22.14%), Postives = 214/560 (38.21%), Query Frame = 0
Query:  209 WISPACADAHAVFHIYQRMKKKMLKKGAI--SAEANNSFEAYEQFYALIDQSLGRIGKQRLFLNEDTLSDVLTRFEYDRMSQQSIFERWAVQYCDEVSQVEMSSP-MLRHLLFAPYQNKYNMNEKIPTEKVFA--GRQRIAGRHDTTSDSKRSRARKRKVSIRGAGLVAQKHASNGVPSVSIPALQTLLATFSSSED-------------------------------------EELREACSAINGLLNAKAAKLASQNFEKRVE--QVVDSDRQIRPRITVDFERGRLQT---NVSSN---------VLELLRAKKDHELLLLDFENLSLCALADLSGCERLKKRLRLKDAAHAYLAKEFSKEISNALYDGSCVLR-----GEGVT----VENAFPEKFLMAKMLDTCMSKGPRIEIVKKVMKCDQARALQLVQGWFQVHPVVRSWCEQEESRMRDRKVAETIRGRQR---ALKIGRGKRGTFSVNEGMTFAIEGSAGDFMMQSVLKLVESERINALRWQVALANDDRIVLHGPSWSAEEASAAVVDTLTSFNDGAPII 700
            WI  +  D+ +   +Y  +K K+ K   I       +  + YE ++    + L ++  + + ++   LS+V       +      F  W  +YC E   + + S   LR LLF    N+ + N+ +PT K F     + +      T    R      K+   G+ L    +  +G PSVS  AL+ +    S   D                                      E  EAC AI  L    +      NF   ++   V   + +I   + ++ E GRL     N+ +          + +   A   + L++ D+  L L  LA L+ C+ +K+        H+  A      I  A+     +L      GE       +++AF  +   AKML+  ++ G     + K  K     A + V  W++    V  W E  +          T+ GR R   ++      + +      +   ++GSA D  M ++L++  S R+  L W++ L   D ++L GPS SAEEA A VV+ ++   DG  I+
Sbjct:  638 WICYSSLDSMSTLKLYDSLKSKLSKMPWIMNGKYKGSMLDFYENYWQPFGKILVQMETEGMLVDRAYLSEVEKVAIAQQQVAADRFRNWTSKYCPEARYMNVGSDAQLRTLLFGGICNRKDHNQFLPTVKKFRVPNVENVIEEGKKTPKKYRD-ITLHKI---GSNLQTDFYTLSGWPSVSGDALKAIAGKVSVEYDFSNDASEPPLEDDPQISENKNVDISAYGTAYAAFGGGHEGMEACHAIASLCEICSIDSLISNFILPLQGSHVSGRNGRIHCSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFVAAPGNSLIVADYGQLELRILAHLADCKSMKEAFEAGGDFHSRTAMNMYPYIREAVQQKEVILEWHPQPGEEKPPVPLLKDAFGSERRKAKMLNFSIAYGKTPMGLAKDWKVSVREARETVDLWYKERQEVLRWQEARKKEAAKIGCVHTLLGRARRFPSMAHASPPQRSHIERAAINTPVQGSAADVAMCAMLEIDRSNRLKELGWKLLLQVHDEVILEGPSESAEEAKALVVEYMSKPFDGRNIL 1193          
The following BLAST results are available for this feature:
BLAST of Ggra6716.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJT69.930e-17141.29DNA polymerase I B, chloroplastic/mitochondrial n=... [more]
A0A6A4LLM65.400e-2322.44POLAc domain-containing protein (Fragment) n=1 Tax... [more]
A0A834GV696.970e-2222.08POLAc domain-containing protein n=1 Tax=Rhododendr... [more]
A0A4Y7JX151.850e-2122.22POLAc domain-containing protein n=6 Tax=Papaver so... [more]
DNA polymerase I A, chloroplastic-like n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D6322C5.980e-2120.94DNA polymerase I A, chloroplastic-like n=1 Tax=Pan... [more]
A0A8J4Q4E51.010e-1821.12Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
A0A2P6NE062.150e-1821.80DNA-directed DNA polymerase n=1 Tax=Planoprotostel... [more]
A0A803LSZ93.550e-1822.90POLAc domain-containing protein n=4 Tax=Chenopodiu... [more]
A0A200QLZ06.580e-1821.20DNA-directed DNA polymerase n=1 Tax=Macleaya corda... [more]
DNA polymerase I A, chloroplastic/mitochondrial isoform X1 n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F45BC6.430e-1522.14DNA polymerase I A, chloroplastic/mitochondrial is... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 77..254
e-value: 9.4E-8
score: 33.9
NoneNo IPR availableGENE3D1.10.150.20coord: 481..638
e-value: 2.9E-13
score: 51.6
NoneNo IPR availableGENE3D3.30.70.370coord: 458..691
e-value: 2.9E-13
score: 51.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 339..359
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 340..355
NoneNo IPR availablePANTHERPTHR10133:SF41DNA POLYMERASE NUcoord: 108..695
IPR002298DNA polymerase APANTHERPTHR10133DNA POLYMERASE Icoord: 108..695
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 373..690
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 109..230

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:277441..279609 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6716.t1Ggra6716.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 277441..279609 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6716.t1 ID=Ggra6716.t1|Name=Ggra6716.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=723bp
MSILRLRTWAGLRKRISFFRKTVTSTALATPQERSGIDGLHRQISIVDDV
RTASKAIEALLSLPEGTPVAWSSQALLPRTSSAMVTLCGYTGDTLQNGTW
TFICPSSRHETAVWELMREYFRDEGTKLICFDRNHFSRHLQSRDIQASGY
IHDVQTMIRMSGLKEKGFDAYVKSILDKRTTSKREAFFSGHDRPWETPSS
EVALSSDEWISPACADAHAVFHIYQRMKKKMLKKGAISAEANNSFEAYEQ
FYALIDQSLGRIGKQRLFLNEDTLSDVLTRFEYDRMSQQSIFERWAVQYC
DEVSQVEMSSPMLRHLLFAPYQNKYNMNEKIPTEKVFAGRQRIAGRHDTT
SDSKRSRARKRKVSIRGAGLVAQKHASNGVPSVSIPALQTLLATFSSSED
EELREACSAINGLLNAKAAKLASQNFEKRVEQVVDSDRQIRPRITVDFER
GRLQTNVSSNVLELLRAKKDHELLLLDFENLSLCALADLSGCERLKKRLR
LKDAAHAYLAKEFSKEISNALYDGSCVLRGEGVTVENAFPEKFLMAKMLD
TCMSKGPRIEIVKKVMKCDQARALQLVQGWFQVHPVVRSWCEQEESRMRD
RKVAETIRGRQRALKIGRGKRGTFSVNEGMTFAIEGSAGDFMMQSVLKLV
ESERINALRWQVALANDDRIVLHGPSWSAEEASAAVVDTLTSFNDGAPII
ESALHQLKVLRGENFRAMETLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR002298DNA_polymerase_A
IPR043502DNA/RNA_pol_sf
IPR012337RNaseH-like_sf