Ggra6660.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6660.t1
Unique NameGgra6660.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length303
Homology
BLAST of Ggra6660.t1 vs. uniprot
Match: A0A2V3J007 (Casein kinase II subunit beta n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J007_9FLOR)

HSP 1 Score: 433 bits (1113), Expect = 2.350e-151
Identity = 204/232 (87.93%), Postives = 219/232 (94.40%), Query Frame = 0
Query:    1 MSKTTANADGFTSGDSIDSGASEDTTWISWFSQLKGNEFFCEVEEDFINDDFNLTGLSSQVTYYNYALDTILDVDIPEGELDERQQELVEVSAETLYGLIHARYILTAHGMNAMRSKFIDGAFGRCPRVFCHGQQVLPVGLSDVPRNSTVKTFCPRCWDLYFPRSRIHNNLDGAFWGTTFPHMFLHTYSTLVPKRNPEHYVPRIYGFKIHRSAVQVRRNRSDEDTHNHVDDR 232
            MSKTT NADGFTSGDSIDSG SEDTTWISWFSQLKGNEFFCEVEEDFINDDFNLTGLSSQVTYYNYALDTILDVDIPEGELDERQQELVEVSAETLYGLIHARYILTA GM+AMRSK+ +GAFGRCPRV+C GQQVLPVGLSD+PR+STVKTFCP CWD+Y+PRSRIHNNLDGAFWGTTFPHMFLHTY++LVP RNPE YVPRIYGFKIH++A+QVRRN + ED H  +DDR
Sbjct:    1 MSKTTPNADGFTSGDSIDSGVSEDTTWISWFSQLKGNEFFCEVEEDFINDDFNLTGLSSQVTYYNYALDTILDVDIPEGELDERQQELVEVSAETLYGLIHARYILTARGMDAMRSKYAEGAFGRCPRVYCQGQQVLPVGLSDMPRHSTVKTFCPMCWDVYYPRSRIHNNLDGAFWGTTFPHMFLHTYNSLVPPRNPERYVPRIYGFKIHKTAIQVRRNVNAEDVH--IDDR 230          
BLAST of Ggra6660.t1 vs. uniprot
Match: A0A7S1XHU3 (Casein kinase II subunit beta n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XHU3_9RHOD)

HSP 1 Score: 352 bits (902), Expect = 1.360e-118
Identity = 161/206 (78.16%), Postives = 182/206 (88.35%), Query Frame = 0
Query:   14 GDSIDSGASEDTTWISWFSQLKGNEFFCEVEEDFINDDFNLTGLSSQVTYYNYALDTILDVDIPEGELDERQQELVEVSAETLYGLIHARYILTAHGMNAMRSKFIDGAFGRCPRVFCHGQQVLPVGLSDVPRNSTVKTFCPRCWDLYFPRSRIHNNLDGAFWGTTFPHMFLHTYSTLVPKRNPEHYVPRIYGFKIHRSAVQVRRN 219
            G+S++S  SED TWI+WF  LKGNEFFCEV+EDFI DDFNLTGLSSQVTYYNYALDTILDVDIP+GELD+RQQELVEVSAETLYGLIHARYILTA GM+AM SKF DG+FGRCPRV+C GQ VLPVG SD+PR STVK FCP CWDL+FPRSR HN LDGA+WGT+FPH+FL +Y  LVPKR+ EHY PRI+GFKIH S++ V+RN
Sbjct:   89 GESLESSVSEDITWITWFCSLKGNEFFCEVDEDFIQDDFNLTGLSSQVTYYNYALDTILDVDIPDGELDDRQQELVEVSAETLYGLIHARYILTARGMHAMLSKFNDGSFGRCPRVYCSGQPVLPVGQSDLPRLSTVKIFCPMCWDLFFPRSRHHNTLDGAYWGTSFPHLFLQSYPYLVPKRSTEHYTPRIFGFKIHNSSLPVQRN 294          
BLAST of Ggra6660.t1 vs. uniprot
Match: A0A7S0ZBP1 (Casein kinase II subunit beta n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZBP1_9RHOD)

HSP 1 Score: 346 bits (887), Expect = 3.710e-117
Identity = 157/206 (76.21%), Postives = 180/206 (87.38%), Query Frame = 0
Query:   14 GDSIDSGASEDTTWISWFSQLKGNEFFCEVEEDFINDDFNLTGLSSQVTYYNYALDTILDVDIPEGELDERQQELVEVSAETLYGLIHARYILTAHGMNAMRSKFIDGAFGRCPRVFCHGQQVLPVGLSDVPRNSTVKTFCPRCWDLYFPRSRIHNNLDGAFWGTTFPHMFLHTYSTLVPKRNPEHYVPRIYGFKIHRSAVQVRRN 219
            G+S+DS  SED TWISWF  LKGNEFFCEV+EDFI DDFNLTGLSSQVTYYNYALDTILD+DI EGELD+RQQELVEVSAETLYGLIHARYILT  GM+AM +K+ +G FGRCPRV+C GQ VLPVG SD+PR STVK FCP CWDL+FPRSR HN LDGA+WGT+FPH+FL TY  LVP R+ +HY+PRI+GFKIH+S++ V+RN
Sbjct:   35 GESLDSSVSEDITWISWFCSLKGNEFFCEVDEDFIQDDFNLTGLSSQVTYYNYALDTILDIDIAEGELDDRQQELVEVSAETLYGLIHARYILTGRGMHAMLTKYNEGCFGRCPRVYCTGQPVLPVGQSDLPRLSTVKIFCPMCWDLFFPRSRQHNTLDGAYWGTSFPHLFLQTYHYLVPPRSADHYIPRIFGFKIHKSSLPVQRN 240          
BLAST of Ggra6660.t1 vs. uniprot
Match: A0A5J4Z9T2 (Casein kinase II subunit beta n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z9T2_PORPP)

HSP 1 Score: 344 bits (883), Expect = 1.040e-115
Identity = 157/206 (76.21%), Postives = 181/206 (87.86%), Query Frame = 0
Query:   14 GDSIDSGASEDTTWISWFSQLKGNEFFCEVEEDFINDDFNLTGLSSQVTYYNYALDTILDVDIPEGELDERQQELVEVSAETLYGLIHARYILTAHGMNAMRSKFIDGAFGRCPRVFCHGQQVLPVGLSDVPRNSTVKTFCPRCWDLYFPRSRIHNNLDGAFWGTTFPHMFLHTYSTLVPKRNPEHYVPRIYGFKIHRSAVQVRRN 219
            G+S++S  SEDT+WISWF  LKGNEFFCEV++DFI DDFNLTGLSSQVTYYNYALDTILDVDIPEGELDERQQELVEVSAETLYGLIHARYILTA GM+AM +K+ +GAFGRCPRVFC GQ VLPVG SD+PR ST+K FCP CWD+YFPRSR HN LDGA+WGT+FPH+FL     LVP+RN + YVPR++GFK+H S++ V+RN
Sbjct:   86 GESLESSLSEDTSWISWFCSLKGNEFFCEVDDDFIQDDFNLTGLSSQVTYYNYALDTILDVDIPEGELDERQQELVEVSAETLYGLIHARYILTARGMHAMLNKYNEGAFGRCPRVFCLGQNVLPVGQSDLPRLSTMKVFCPMCWDIYFPRSRHHNTLDGAYWGTSFPHLFLQMNHHLVPQRNADRYVPRVFGFKLHSSSLPVQRN 291          
BLAST of Ggra6660.t1 vs. uniprot
Match: A0A1X6NR51 (Casein kinase II subunit beta n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NR51_PORUM)

HSP 1 Score: 340 bits (873), Expect = 6.800e-115
Identity = 158/207 (76.33%), Postives = 173/207 (83.57%), Query Frame = 0
Query:   13 SGDSIDSGASEDTTWISWFSQLKGNEFFCEVEEDFINDDFNLTGLSSQVTYYNYALDTILDVDIPEGELDERQQELVEVSAETLYGLIHARYILTAHGMNAMRSKFIDGAFGRCPRVFCHGQQVLPVGLSDVPRNSTVKTFCPRCWDLYFPRSRIHNNLDGAFWGTTFPHMFLHTYSTLVPKRNPEHYVPRIYGFKIHRSAVQVRRN 219
            SG   +S  S+D+TWISWF  LKGNEFFCEV+EDFI DDFNLTGLS  VTYYNYALDTILD DIPEGELDERQQELVEV+AETLYGLIHAR++LTA GM AM+ KF D AFGRCPR  C GQ VLPVG SD+PR STVK FCP CWD+YFPRSR HN +DGA+WGTTFPH+FLHTY + VP RN E Y PRIYGFKIH SA QV+RN
Sbjct:   33 SGSLAESSISDDSTWISWFCSLKGNEFFCEVDEDFIQDDFNLTGLSQHVTYYNYALDTILDADIPEGELDERQQELVEVAAETLYGLIHARFLLTARGMQAMQQKFTDVAFGRCPRALCAGQPVLPVGQSDLPRISTVKIFCPMCWDIYFPRSRNHNTIDGAYWGTTFPHLFLHTYQSHVPLRNGERYEPRIYGFKIHASAGQVQRN 239          
BLAST of Ggra6660.t1 vs. uniprot
Match: A0A7S1T7G6 (Casein kinase II subunit beta n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T7G6_9RHOD)

HSP 1 Score: 341 bits (874), Expect = 1.260e-114
Identity = 156/208 (75.00%), Postives = 181/208 (87.02%), Query Frame = 0
Query:   14 GDSIDSGASEDTTWISWFSQLKGNEFFCEVEEDFINDDFNLTGLSSQVTYYNYALDTILDVDIPEGELDERQQELVEVSAETLYGLIHARYILTAHGMNAMRSKFIDGAFGRCPRVFCHGQQVLPVGLSDVPRNSTVKTFCPRCWDLYFPRSRIHNNLDGAFWGTTFPHMFLHTYSTLVPKRNPEHYVPRIYGFKIHRSAVQVRRNRS 221
            G+S++S  SEDTTWISWF+ LKGNEFFC+VE D+I DDFNLTGL+S V YYNYALDTILDVDIP+GELDERQQELVE+SAETLYGLIHARYILTA GM+AM +K+ D AFGRCPRV+C GQ VLPVG +D PR STVK FCP CWD+Y+PRSR H+ LDGA+WGTTF H+FL  YS LVP+RNPE YVPRI+GFKI  ++VQV+RNR+
Sbjct:   70 GESLESSVSEDTTWISWFTSLKGNEFFCDVELDYIEDDFNLTGLNSMVAYYNYALDTILDVDIPDGELDERQQELVEMSAETLYGLIHARYILTARGMHAMLAKYNDAAFGRCPRVYCAGQAVLPVGTADQPRLSTVKIFCPMCWDVYYPRSRHHDTLDGAYWGTTFAHLFLQQYSNLVPQRNPERYVPRIFGFKISPNSVQVQRNRA 277          
BLAST of Ggra6660.t1 vs. uniprot
Match: M2W7H7 (Casein kinase II subunit beta n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W7H7_GALSU)

HSP 1 Score: 319 bits (817), Expect = 1.390e-106
Identity = 143/207 (69.08%), Postives = 169/207 (81.64%), Query Frame = 0
Query:   16 SIDSGASEDTTWISWFSQLKGNEFFCEVEEDFINDDFNLTGLSSQVTYYNYALDTILDVDIPEGELDERQQELVEVSAETLYGLIHARYILTAHGMNAMRSKFIDGAFGRCPRVFCHGQQVLPVGLSDVPRNSTVKTFCPRCWDLYFPRSRIHNNLDGAFWGTTFPHMFLHTYSTLVPKRNPEHYVPRIYGFKIHRSAVQVRRNRSD 222
            S+DS  S+DT+WI WF  LKGNEFFCEV+E+FI+DDFNLTGLS+QV +Y +A+DTILD DIPEGELDERQQELVEV+AETLYGLIHAR+ILTA G+  M  KF    FGRCPRV CHGQ V+PVGLSD PR +TVK FCPRCWD++ PRSR H  LDGA+WGTTF H+F HTY   +P RN E Y+PRIYGF++H ++ +VRRN  D
Sbjct:   27 SLDSELSKDTSWIMWFCSLKGNEFFCEVDEEFIHDDFNLTGLSTQVAFYEHAVDTILDFDIPEGELDERQQELVEVAAETLYGLIHARFILTARGLQLMLEKFNRADFGRCPRVLCHGQPVVPVGLSDTPRQNTVKVFCPRCWDIFNPRSRSHCTLDGAYWGTTFAHLFFHTYPDRIPVRNKETYIPRIYGFRLHETSEEVRRNHGD 233          
BLAST of Ggra6660.t1 vs. uniprot
Match: M1UT51 (Casein kinase II subunit beta n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UT51_CYAM1)

HSP 1 Score: 296 bits (759), Expect = 1.500e-96
Identity = 130/197 (65.99%), Postives = 162/197 (82.23%), Query Frame = 0
Query:   23 EDTTWISWFSQLKGNEFFCEVEEDFINDDFNLTGLSSQVTYYNYALDTILDVDIPEGELDERQQELVEVSAETLYGLIHARYILTAHGMNAMRSKFIDGAFGRCPRVFCHGQQVLPVGLSDVPRNSTVKTFCPRCWDLYFPRSRIHNNLDGAFWGTTFPHMFLHTYSTLVPKRNPEHYVPRIYGFKIHRSAVQVRRN 219
            ED +WISWF  L GNEFFCEV+E+FI DDFNLTGLSS V+YY YALDTILD+++P+  +DERQ+E++E++AE LYGLIHARYILT  G++ M  K+ +  FGRCPRVFC+GQ VLPVG SD+PR + VK FCP+CWD+Y PRS  H++LDGAFWGTTFPH+FL TY  LVP+RNP  YVPRI+GF++   + QV+RN
Sbjct:  116 EDLSWISWFCSLSGNEFFCEVDEEFIQDDFNLTGLSSLVSYYEYALDTILDIELPDPGIDERQREIIEMNAEFLYGLIHARYILTNRGLHDMLEKYNNVDFGRCPRVFCNGQPVLPVGQSDLPRTAVVKLFCPKCWDIYVPRSAAHSHLDGAFWGTTFPHLFLQTYPELVPERNPCRYVPRIFGFRVSEKSKQVQRN 312          
BLAST of Ggra6660.t1 vs. uniprot
Match: A0A061RZ77 (Casein kinase II subunit beta n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RZ77_9CHLO)

HSP 1 Score: 273 bits (699), Expect = 3.330e-88
Identity = 126/203 (62.07%), Postives = 155/203 (76.35%), Query Frame = 0
Query:   15 DSIDSGASEDTTWISWFSQLKGNEFFCEVEEDFINDDFNLTGLSSQVTYYNYALDTILDVDIP-EGELDERQQELVEVSAETLYGLIHARYILTAHGMNAMRSKFIDGAFGRCPRVFCHGQQVLPVGLSDVPRNSTVKTFCPRCWDLYFPRSRIHNNLDGAFWGTTFPHMFLHTYSTLVPKRNPEHYVPRIYGFKIHRSAVQV 216
            DS  SG  EDT+WISWF  LKGNEFFCEV+ED++ DDFNL+GLS QV YY YALD ILDVD P E  L E Q E++E +AE LYGLIH RYILT  G++AM  K+ +  FGRCPRV C+GQ  LPVG SD+PRNS+VK FCP+C D++ PRS+ H+N+DGA++GTTFPH+ L +Y  L P +  E YVPR++GFK+H SA Q 
Sbjct:   32 DSDGSGTDEDTSWISWFCSLKGNEFFCEVDEDYVQDDFNLSGLSVQVPYYEYALDLILDVDSPTEDVLSEEQHEMIESAAELLYGLIHVRYILTTRGLSAMFEKYKNVDFGRCPRVHCNGQPCLPVGCSDIPRNSSVKIFCPKCEDIFLPRSKYHSNIDGAYFGTTFPHLLLMSYPILRPVKPVEQYVPRVFGFKLHHSARQA 234          
BLAST of Ggra6660.t1 vs. uniprot
Match: A0A1E7EUU7 (Casein kinase II subunit beta n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EUU7_9STRA)

HSP 1 Score: 270 bits (690), Expect = 1.670e-87
Identity = 122/197 (61.93%), Postives = 155/197 (78.68%), Query Frame = 0
Query:   19 SGASEDTTWISWFSQLKGNEFFCEVEEDFINDDFNLTGLSSQVTYYNYALDTILDVDIP-EGELDERQQELVEVSAETLYGLIHARYILTAHGMNAMRSKFIDGAFGRCPRVFCHGQQVLPVGLSDVPRNSTVKTFCPRCWDLYFPRSRIHNNLDGAFWGTTFPHMFLHTYSTLVPKRNPEHYVPRIYGFKIHRSAV 214
            S + ED +WI+WF  L+GNEFFCEV+ED+I DDFNLTGLSS V YY YALD +LDV++P E  L E QQE+VE +AE LYGLIHARYI+T  GM+AM  K+   AFGRCPRVFC GQ VLPVGLSD+PRN TV  FCPRC  L+FP+S    N+DGA++GTTFPH++L T+  ++P +  + YVPR+YGFK+H++++
Sbjct:    2 SASDEDGSWITWFCSLRGNEFFCEVDEDYIQDDFNLTGLSSLVPYYEYALDMVLDVEMPMEDSLTEEQQEIVESAAEMLYGLIHARYIVTNRGMHAMYEKYRAAAFGRCPRVFCQGQPVLPVGLSDLPRNYTVNVFCPRCHGLFFPKSTRQANIDGAYFGTTFPHLYLMTHPDMIPTKPQQTYVPRVYGFKVHKTSL 198          
The following BLAST results are available for this feature:
BLAST of Ggra6660.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0072.350e-15187.93Casein kinase II subunit beta n=1 Tax=Gracilariops... [more]
A0A7S1XHU31.360e-11878.16Casein kinase II subunit beta n=1 Tax=Erythrolobus... [more]
A0A7S0ZBP13.710e-11776.21Casein kinase II subunit beta n=1 Tax=Timspurckia ... [more]
A0A5J4Z9T21.040e-11576.21Casein kinase II subunit beta n=1 Tax=Porphyridium... [more]
A0A1X6NR516.800e-11576.33Casein kinase II subunit beta n=1 Tax=Porphyra umb... [more]
A0A7S1T7G61.260e-11475.00Casein kinase II subunit beta n=1 Tax=Compsopogon ... [more]
M2W7H71.390e-10669.08Casein kinase II subunit beta n=1 Tax=Galdieria su... [more]
M1UT511.500e-9665.99Casein kinase II subunit beta n=1 Tax=Cyanidioschy... [more]
A0A061RZ773.330e-8862.07Casein kinase II subunit beta n=1 Tax=Tetraselmis ... [more]
A0A1E7EUU71.670e-8761.93Casein kinase II subunit beta n=1 Tax=Fragilariops... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000704Casein kinase II, regulatory subunitPRINTSPR00472CASNKINASEIIcoord: 144..165
score: 51.42
coord: 97..118
score: 63.64
coord: 172..189
score: 55.56
coord: 122..143
score: 67.05
coord: 26..42
score: 64.71
coord: 43..57
score: 68.33
IPR000704Casein kinase II, regulatory subunitSMARTSM01085CK_II_beta_2coord: 26..208
e-value: 6.6E-116
score: 401.0
IPR000704Casein kinase II, regulatory subunitPFAMPF01214CK_II_betacoord: 26..208
e-value: 4.7E-76
score: 254.6
IPR000704Casein kinase II, regulatory subunitPANTHERPTHR11740CASEIN KINASE II SUBUNIT BETAcoord: 18..219
IPR000704Casein kinase II, regulatory subunitPROSITEPS01101CK2_BETAcoord: 126..157
IPR016149Casein kinase II, regulatory subunit, N-terminalGENE3D1.10.1820.10protein kinase ck2 holoenzyme, chain C, domain 1coord: 20..122
e-value: 3.7E-38
score: 132.1
NoneNo IPR availableGENE3D2.20.25.20coord: 123..197
e-value: 2.8E-33
score: 115.7
NoneNo IPR availablePANTHERPTHR11740:SF0CASEIN KINASE II SUBUNIT BETAcoord: 18..219
IPR035991Casein kinase II subunit beta-likeSUPERFAMILY57798Casein kinase II beta subunitcoord: 24..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:53774..54844 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6660.t1Ggra6660.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 53774..54844 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6660.t1 ID=Ggra6660.t1|Name=Ggra6660.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=303bp
MSKTTANADGFTSGDSIDSGASEDTTWISWFSQLKGNEFFCEVEEDFIND
DFNLTGLSSQVTYYNYALDTILDVDIPEGELDERQQELVEVSAETLYGLI
HARYILTAHGMNAMRSKFIDGAFGRCPRVFCHGQQVLPVGLSDVPRNSTV
KTFCPRCWDLYFPRSRIHNNLDGAFWGTTFPHMFLHTYSTLVPKRNPEHY
VPRIYGFKIHRSAVQVRRNRSDEDTHNHVDDRNLIDVLLHDRLFYASSSS
FVCVRRDEISSQIMPYIRRNQFFDSNVTHCFEIFPFTAPILSSLFVFPFP
LG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000704Casein_kinase_II_reg-sub
IPR016149Casein_kin_II_reg-sub_N
IPR035991Casein_kinase_II_beta-like