Ggra6547.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6547.t1
Unique NameGgra6547.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length477
Homology
BLAST of Ggra6547.t1 vs. uniprot
Match: A0A2V3J445 (Cyclin-U4-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J445_9FLOR)

HSP 1 Score: 309 bits (792), Expect = 1.440e-97
Identity = 195/431 (45.24%), Postives = 249/431 (57.77%), Query Frame = 0
Query:   78 VATLVLAAPAPWLAKHTLAQVRELYHAALHPETSVFDLPSNAPTLDAVVDHVLENAGVSRSALVLACIYVDRLAAAAPHMFITESNVQRLFGVAFMLAAKWLEDAYYSSARFAELYCMPVQQLNQLEAAFTAAIGFELFVSTEQFRDAQLALMTEALDTPSSLNIFQALVNAKVADVHKAFDATRTWGKFPDGGGSA-------GFWAVAAGLACDVEEH--DEEHEIESLE-FSTLEHHPCEAKGRKVVAQLARAQLQHDFPRVPAESFATELQRRFAENGVFRYAKLQLLAGSQQLDDLVLPPLERVISPP--ELP----PPRAASPTLAERGNSPCAPG----GLNSTVLPAHTTRAPAGGSSMP------WPMWPG---RCLSSRYANIN---ARRPGRTTAAPEPHNPAGTWSTSHFTDFCPIRSW 476
            +A LV A P P L   T A +  LY AAL    S FDL + + TLDAVV HV+ N  VSRSALV AC+Y+DRL  AAPHMF+T +NVQRLF VAFMLAAKW EDAY+SSA FA L+ M + +L  LE+ F   I + LFV+TEQF DAQ+ALM  ALD+P  L ++ ALV+ +VAD H AFD   TW + P     +         WA+AA L    +       H     +  ST+       +GR+VVA LARAQLQHDFP+V  + + +ELQRRF ++G+FRYAKLQL+  S++LDDLVLPPLER+  PP  ELP    PP         RGN+    G    G  + ++ A +    +  + +       W  WP     C ++R +++    A R       P    P   WST  F DFCPIRSW
Sbjct:    1 MAALVFAVPTPLLHTFTPAHLSTLYTAALRRTRSPFDLLNPSATLDAVVHHVVHNTTVSRSALVTACVYIDRLTQAAPHMFVTTTNVQRLFAVAFMLAAKWHEDAYFSSAYFAALFGMSLPELTTLESTFIHTIDYHLFVTTEQFHDAQVALMARALDSPQGLTVYHALVHHRVADSHNAFDLANTWRQVPLHSAVSVAQPPAHHVWAMAANLVRHRQHPLPQPPHRARPTQPQSTVPTSTALCEGRRVVAALARAQLQHDFPQVCEQLYVSELQRRFTDDGIFRYAKLQLIGQSEELDDLVLPPLERLPEPPLVELPSPARPPXXXXXXCDRRGNALEERGHGVRGFGAFLVNAASCLTVSESTQLECEPFVGWASWPDLAVTCYAARGSDVESPCATRGFSDCVEPLLSVPTNIWSTPKFVDFCPIRSW 431          
BLAST of Ggra6547.t1 vs. uniprot
Match: A0A2V3J580 (Cyclin-U2-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J580_9FLOR)

HSP 1 Score: 258 bits (658), Expect = 3.440e-77
Identity = 159/379 (41.95%), Postives = 221/379 (58.31%), Query Frame = 0
Query:   18 NLTPQQPIVVPGASMARYPLVTRGGALVMVVKAAMNSRAEKGQHWLDLASASATDVDSFDVATLVLAAPAPWLAKHTLAQVRELYHAALHPETSVFDLPSNAPTLDAVVDHVLENAGVSRSALVLACIYVDRLAAAAPHMFITESNVQRLFGVAFMLAAKWLEDAYYSSARFAELYCMPVQQLNQLEAAFTAAIGFELFVSTEQFRDAQLALMTEALDTPSSLNIFQALVNAKVADVHKAFDATRTWGKF----PDGGGSAGFWAVAAGLACDVEEHDEEHEIESLEFSTLEHHPCEA-------------KGRKVVAQLARAQLQHDFPRVPAESFATELQRRFAENGVFRYAKLQLLAGSQQLDDLVLPPLERVISP 379
            N TP++       S    PL+    AL+MV+  A+++RAEKG+ WL+ A AS      FD+A +V   P P L+  T++Q+  +Y AAL    S FDL S + TL+ VV H++ +  VSRSALV+A +Y+DRL AA PHMF+T +N+QRLF VAF+LAAKWLED ++ S  FA+ + M   ++ QLE  F A+IG+ LFVSTEQF DAQ+ALM EALD+ S L++F +L++  +A V KA     +W +     P    +A  W      A  + E   E        S L+  P +A             +G++VV +LAR QL HDF   P   FA   QR F E G+ RYAKL  +A  + +++L+LPPLE    P
Sbjct:   48 NRTPRRRTTAMSPSF-NIPLINCLPALLMVLNTALHNRAEKGEQWLNAACASR---GPFDLALVVPLVPKPMLSGLTVSQIGHMYRAALGVSRSPFDLLSGSATLNGVVHHIVRHTNVSRSALVIAAVYIDRLTAAVPHMFVTRTNIQRLFAVAFVLAAKWLEDIFFPSNCFADFFGMHPVEMGQLERWFAASIGYRLFVSTEQFHDAQVALMAEALDSDSGLHVFHSLLHHNIAFVQKALHMAPSWKELAVQPPAPCDNAMLWGSIWQTAGRLVETPGEE-------SALDDAPGDAVGCNCVRTERRMVRGQEVVQELARVQLAHDFSVTPEGLFARHWQRYFTEIGLVRYAKLDRIARDEWVENLILPPLEHPEEP 415          
BLAST of Ggra6547.t1 vs. uniprot
Match: A0A2V3JB77 (Cyclin-U4-3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3JB77_9FLOR)

HSP 1 Score: 194 bits (494), Expect = 5.900e-53
Identity = 120/341 (35.19%), Postives = 186/341 (54.55%), Query Frame = 0
Query:   35 YPLVTRGGALVMVVKAAMNSRAEKGQHWLDLASASATDVDSFDVATLVLAAPAPWLAKHTLAQVRELYHAALHPETSVFDLPSNAPTLDAVVDHVLENAGVSRSALVLACIYVDRLAAAAPHMFITESNVQRLFGVAFMLAAKWLEDAYYSSARFAELYCMPVQQLNQLEAAFTAAIGFELFVSTEQFRDAQLALMTEALDTPSSLNIFQALVNAKVADVHKAFDATRTWGKFPDGGGSAGFWAVAAGLACDVEEHDEEHEIESLEFSTLEHHPCEAKG-RKVVAQLARAQLQHDFPRVPAESFATELQRRFAENGVFRYAKLQLLAGSQQLDDLVLPPLE 374
            YPLVT    L++V++  + S  + G  +  LA+ S     S ++  LV AAP P L+  T      LYHAAL+   + F + +  P L   ++ ++E    S S L+ ACIY+DRL  A PH+F+  +N+ ++F VAFMLA K+ ED Y +S  F+    +P+++LNQLE  F   I + LFV  + FRD Q+ LM  A+ + + + +   L +  ++D+  A+   + W  +P    S   +  +  ++ DV         E +  S L     E K  R ++A+LA  QL HDFP +P + +A  LQ R+  NG+ RYA L LL+  + +DD+ LPPLE
Sbjct:   38 YPLVTCATTLMLVIRTVLASLIDAGDTFARLAAHSH---QSLNLIELVRAAPLPPLSTVTPHYYARLYHAALNTPLTPFHVVNPLPPLHDYIERLVELTAASNSVLLTACIYLDRLVVAEPHLFLRSANIHKMFAVAFMLAFKFHEDDYLTSHFFSPALGIPIEELNQLEVYFLRCINYHLFVKADDFRDTQITLMASAIHSENGIPVLHTLRHRGISDLAYAYSRMKPWRVYPKNAYSR-HYTDSYLMSPDVLGP------EDIAMSFLHGAIVETKETRSILAELAAMQLHHDFPDLPPQPYAGALQCRYNHNGIVRYAILHLLSEMELVDDVTLPPLE 368          
BLAST of Ggra6547.t1 vs. uniprot
Match: A0A7S0T842 (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T842_9RHOD)

HSP 1 Score: 84.0 bits (206), Expect = 2.240e-14
Identity = 48/126 (38.10%), Postives = 78/126 (61.90%), Query Frame = 0
Query:  117 SNAPTLDAV--VDHVLENAGVSRSALVLACIYVDRLAAAAPHMFITESNVQRLFGVAFMLAAKWLEDAYYSSARFAELYCMPVQQLNQLEAAFTAAIGFELFVSTEQFRDAQLALMTEALDTPSSL 240
            S+ P + A      V + A  S + L++A IY++R A+  P + ++ +NV RL   A MLAAK+ +D YY++A +A++  +P+Q++N LE  F  A+GFELFVS E+F   +  ++ E L   +SL
Sbjct:   85 SSLPAISACDYFHRVAKYAFCSPACLMMAFIYIERGASYQPSLRLSPTNVHRLIITAVMLAAKFFDDVYYNNAYYAKVGGIPLQEINLLETEFLMAVGFELFVSEEEFIRFETDVVDEVLSDRTSL 210          
BLAST of Ggra6547.t1 vs. uniprot
Match: D8R719 (Uncharacterized protein (Fragment) n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R719_SELML)

HSP 1 Score: 72.0 bits (175), Expect = 2.640e-11
Identity = 40/117 (34.19%), Postives = 68/117 (58.12%), Query Frame = 0
Query:  107 HPETSVFD-LPSNAPTLDAVVDHVLENAGVSRSALVLACIYVDRLAAAAPHMFITESNVQRLFGVAFMLAAKWLEDAYYSSARFAELYCMPVQQLNQLEAAFTAAIGFELFVSTEQF 222
            H   +VF  L + + ++D  ++ + + A  S S  V+A +Y+DR     P + IT  NV RL   + M+AAK+L+DAYY++A +A++  +  Q++N+LE  F   + F L V+   F
Sbjct:   29 HSNLTVFHGLRAPSISIDKYLERIFKYANCSPSCFVVAYVYIDRFIQQKPSLPITSLNVHRLLVTSVMVAAKFLDDAYYNNAYYAKVGGVNTQEMNRLELEFLFHLNFRLQVTVSVF 145          
BLAST of Ggra6547.t1 vs. uniprot
Match: cyclin-P3-1-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CFB24 (cyclin-P3-1-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CFB24)

HSP 1 Score: 70.9 bits (172), Expect = 2.260e-10
Identity = 41/121 (33.88%), Postives = 70/121 (57.85%), Query Frame = 0
Query:  117 SNAPTLDAV--VDHVLENAGVSRSALVLACIYVDRLAAAAPHMFITESNVQRLFGVAFMLAAKWLEDAYYSSARFAELYCMPVQQLNQLEAAFTAAIGFELFVSTEQFRDAQLALMTEALD 235
            S AP+L     +D + + +  S S  V+A IYVDR      +MF+T  N+ R+   + M+AAK+++DA++++A +A +  +   +LN+LE  F   + FEL V+ + F+     L  EA+D
Sbjct:   68 SRAPSLSICQYIDRIFKYSSCSPSCFVIAHIYVDRFVQ-RTNMFLTSLNIHRVIITSVMVAAKFIDDAFFNNAYYARVGGVSTAELNKLEMKFLFGLDFELHVTLQTFKRYCSRLAKEAID 187          
BLAST of Ggra6547.t1 vs. uniprot
Match: L1I8F4 (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I8F4_GUITC)

HSP 1 Score: 72.0 bits (175), Expect = 2.990e-10
Identity = 38/102 (37.25%), Postives = 60/102 (58.82%), Query Frame = 0
Query:  121 TLDAVVDHVLENAGVSRSALVLACIYVDRLAAAAPHMFITESNVQRLFGVAFMLAAKWLEDAYYSSARFAELYCMPVQQLNQLEAAFTAAIGFELFVSTEQF 222
            T  A V+ V + +G S     +  IY++R+    P + +T +N QRLF VA M AAK+L+D YYS+  +AE+  M   ++N+LE  F   +GF L +  E++
Sbjct:   46 TASAFVNRVAKYSGASPCCFAVGLIYLERMKKRDPGVCLTTTNFQRLFLVAVMTAAKFLDDFYYSNKHWAEVGGMTTVEINKLELEFLFRMGFSLHMQREEY 147          
BLAST of Ggra6547.t1 vs. uniprot
Match: A0A834W0H1 (Cyclin n=1 Tax=Senna tora TaxID=362788 RepID=A0A834W0H1_9FABA)

HSP 1 Score: 68.9 bits (167), Expect = 3.420e-10
Identity = 40/106 (37.74%), Postives = 61/106 (57.55%), Query Frame = 0
Query:  119 APTLDAV--VDHVLENAGVSRSALVLACIYVDRLAAAAPHMFITESNVQRLFGVAFMLAAKWLEDAYYSSARFAELYCMPVQQLNQLEAAFTAAIGFELFVSTEQF 222
            APTL     +D + + +  S S  VLA IY+DR      H+ +T  NV RL     MLAAK+++DA++++A +A++  +   +LN+LE  F   + F L VS E F
Sbjct:   20 APTLTVANYIDRIFKYSACSPSCFVLAHIYIDRFLH-LTHLKLTSLNVHRLLITTIMLAAKFMDDAFFNNAYYAKVGGISTSELNRLEMNFLLGVDFRLQVSVETF 124          
BLAST of Ggra6547.t1 vs. uniprot
Match: A0A072UD43 (Cyclin p4 n=3 Tax=Medicago truncatula TaxID=3880 RepID=A0A072UD43_MEDTR)

HSP 1 Score: 70.1 bits (170), Expect = 5.300e-10
Identity = 45/121 (37.19%), Postives = 69/121 (57.02%), Query Frame = 0
Query:  118 NAPTLDA--VVDHVLENAGVSRSALVLACIYVDRLAAAAPHMFITESNVQRLFGVAFMLAAKWLEDAYYSSARFAELYCMPVQQLNQLEAAFTAAIGFELFVSTEQFRDAQLALMTEALDT 236
            +APTL     +D + + +G S S  V+A IYVDRL      + +T  NV RL   + MLAAK+++DA++++A +A +  +   +LN+LE +F   I F L VS + F      L  E L+T
Sbjct:   83 SAPTLSLRKYIDRIFKYSGCSPSCFVVAHIYVDRLLQ-NTEIKLTSLNVHRLLITSIMLAAKFMDDAFFNNAYYARVGGVKTCELNRLEMSFLFGIDFRLQVSVDTFHKYCWQLEEEGLET 202          
BLAST of Ggra6547.t1 vs. uniprot
Match: A0A2I0AH34 (Cyclin-P3-1 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0AH34_9ASPA)

HSP 1 Score: 68.9 bits (167), Expect = 9.970e-10
Identity = 40/133 (30.08%), Postives = 76/133 (57.14%), Query Frame = 0
Query:  121 TLDAVVDHVLENAGVSRSALVLACIYVDRLAAAAPHMFITESNVQRLFGVAFMLAAKWLEDAYYSSARFAELYCMPVQQLNQLEAAFTAAIGFELFVSTEQFRDAQLALMTEALDTPSSLNIFQALVNAKVAD 253
            ++ + V+ +   +  S S  VLA IY+DR     P  ++T  NV RL   + ++AAK+++DA++++A +A +  +  +++N++E +F  ++GF+L VS   FR   L L  ++        I++A    KV+D
Sbjct:   74 SIRSYVERIFTYSKCSPSCFVLAYIYIDRFLQ-LPDTYLTSLNVHRLLITSIVVAAKFIDDAFFNNAYYARVGGVSTREMNRMELSFLFSLGFKLQVSIGTFRGYCLQLERDSTSYQIEKPIYRAKDMVKVSD 205          
The following BLAST results are available for this feature:
BLAST of Ggra6547.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J4451.440e-9745.24Cyclin-U4-1 n=1 Tax=Gracilariopsis chorda TaxID=44... [more]
A0A2V3J5803.440e-7741.95Cyclin-U2-2 n=1 Tax=Gracilariopsis chorda TaxID=44... [more]
A0A2V3JB775.900e-5335.19Cyclin-U4-3 n=1 Tax=Gracilariopsis chorda TaxID=44... [more]
A0A7S0T8422.240e-1438.10Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
D8R7192.640e-1134.19Uncharacterized protein (Fragment) n=4 Tax=Selagin... [more]
cyclin-P3-1-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CFB242.260e-1033.88cyclin-P3-1-like n=1 Tax=Olea europaea var. sylves... [more]
L1I8F42.990e-1037.25Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A834W0H13.420e-1037.74Cyclin n=1 Tax=Senna tora TaxID=362788 RepID=A0A83... [more]
A0A072UD435.300e-1037.19Cyclin p4 n=3 Tax=Medicago truncatula TaxID=3880 R... [more]
A0A2I0AH349.970e-1030.08Cyclin-P3-1 n=1 Tax=Apostasia shenzhenica TaxID=10... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013922Cyclin PHO80-likePFAMPF08613Cyclincoord: 133..215
e-value: 7.7E-13
score: 49.1
IPR013922Cyclin PHO80-likePANTHERPTHR15615UNCHARACTERIZEDcoord: 108..288
NoneNo IPR availableGENE3D1.10.472.10coord: 101..260
e-value: 6.9E-26
score: 93.0
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 129..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000081_piloncontigtig00000081_pilon:234679..236109 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6547.t1Ggra6547.t1Gracilaria gracilis GNS1m malemRNAtig00000081_pilon 234679..236109 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6547.t1 ID=Ggra6547.t1|Name=Ggra6547.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=477bp
MAAVNQPGTNNNGVQTVNLTPQQPIVVPGASMARYPLVTRGGALVMVVKA
AMNSRAEKGQHWLDLASASATDVDSFDVATLVLAAPAPWLAKHTLAQVRE
LYHAALHPETSVFDLPSNAPTLDAVVDHVLENAGVSRSALVLACIYVDRL
AAAAPHMFITESNVQRLFGVAFMLAAKWLEDAYYSSARFAELYCMPVQQL
NQLEAAFTAAIGFELFVSTEQFRDAQLALMTEALDTPSSLNIFQALVNAK
VADVHKAFDATRTWGKFPDGGGSAGFWAVAAGLACDVEEHDEEHEIESLE
FSTLEHHPCEAKGRKVVAQLARAQLQHDFPRVPAESFATELQRRFAENGV
FRYAKLQLLAGSQQLDDLVLPPLERVISPPELPPPRAASPTLAERGNSPC
APGGLNSTVLPAHTTRAPAGGSSMPWPMWPGRCLSSRYANINARRPGRTT
AAPEPHNPAGTWSTSHFTDFCPIRSW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013922Cyclin_PHO80-like
IPR036915Cyclin-like_sf