Ggra6535.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra6535.t1
Unique Name	Ggra6535.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	742

Homology

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BLAST of Ggra6535.t1 vs. uniprot
Match: A0A2V3IG59 (PWWP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG59_9FLOR)

HSP 1 Score: 392 bits (1007), Expect = 1.930e-121
Identity = 239/509 (46.95%), Postives = 286/509 (56.19%), Query Frame = 0

Query:   15 LPPDSELPFQLGDLVLCRYSTYPYWPATVDETHQKQRSGQHVCMHETRGRQKTLAFWCTFSDEDTGGWVRADRMVLFHPSLLDYVRVRSNHDWYNSQNAAIIAALRAYKTIHRGSTLPPKPEPPTDMLRKRH------------------------------------PLDQLDLLSDDDEPEDNNNDQVHRDNDPMDLGTESSXXXXXXXXXXXXXXXXXXXXXXXAKSPRTPAQTKPMRKKRXXXXXXXXXXXXXXKRAKSAEHHLEDQLLH-------------------------------------QSESKQVAALKSRIEEMQASLEKLTASLRRKEKALSDLRTSGNVVTFAPVKQDTVPIETMPQP--FTGPLLSSDEFEHRVSAMRQLFEKLDDAAKDVHGKRQELSAEQEKIRQHYGSLLDGVSDAQGKVVEHQKELAELLRGILVNRVAVIDLRKHQAGNLIKTMSKRYKDMPNVSAYCNALYRGWKRQVVDYVHNNP 448
            LPP    PFQLGDLVLCRYSTYPYWPAT+D+THQ QR GQHVCMHET G    L+FWCTFS+EDTGGWVRADR+VLFHP LL YVRV  NH W ++Q  AI  ALRA+K++H GST+P                                                  P  +LD                H   DPMD+G++SSXXXX                   AKS R          K+              KR+KSAEHHLE QLL+                                     +S+S QVAALK ++ +MQ +L+KLTASL+RKE AL+ LR  G+ V+FAPVK DT+ +E +P       PL  S EFE RV A+R+LF+KLD AAK  H KR+ L+ EQ KIR  Y  LL+ VSDAQ  VV +Q EL++LLRG+  +RVAV DLRKHQAGNL++TMSK  KDMPNVSAYC ALYR WK+QVV+YVHN P
Sbjct:   16 LPPQQNEPFQLGDLVLCRYSTYPYWPATIDQTHQPQRKGQHVCMHETAGGGSALSFWCTFSNEDTGGWVRADRIVLFHPDLLKYVRVHRNHRWSDAQIEAISVALRAFKSMHAGSTVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTSKLDT--------------THDXEDPMDIGSDSSXXXXTRQGHRRTSTSSAGTPRAGAKSAR----------KKRKSTGSAKTPGRPPKRSKSAEHHLEHQLLNPRTTRPQSTSSAQRHSRHAPPSSTPSQPESRRKVTPSKSDSAQVAALKLQLADMQRNLDKLTASLQRKEAALNQLREKGHTVSFAPVKTDTISLEQLPPSPDRDAPLFDSTEFEARVKAIRELFDKLDAAAKRAHDKRRILTEEQNKIRDEYAGLLNEVSDAQAHVVRYQSELSDLLRGVYQSRVAVHDLRKHQAGNLVRTMSKMCKDMPNVSAYCAALYRSWKKQVVEYVHNAP 500

The following BLAST results are available for this feature:

BLAST of Ggra6535.t1 vs. uniprot

BLAST of Ggra6535.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IG59	1.930e-121	46.95	PWWP domain-containing protein n=1 Tax=Gracilariop...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 252..293
None	No IPR available	GENE3D	2.30.30.140		coord: 1..118 e-value: 3.9E-8 score: 35.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 622..741
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..257
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 447..466
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 482..602
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 447..741
None	No IPR available	SUPERFAMILY	63748	Tudor/PWWP/MBT	coord: 21..114

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000081_pilon	contig	tig00000081_pilon:194353..196578 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra6535.t1	Ggra6535.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000081_pilon 194353..196578 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra6535.t1 ID=Ggra6535.t1|Name=Ggra6535.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=742bp
MRSKQKKQSSNDSVLPPDSELPFQLGDLVLCRYSTYPYWPATVDETHQKQ
RSGQHVCMHETRGRQKTLAFWCTFSDEDTGGWVRADRMVLFHPSLLDYVR
VRSNHDWYNSQNAAIIAALRAYKTIHRGSTLPPKPEPPTDMLRKRHPLDQ
LDLLSDDDEPEDNNNDQVHRDNDPMDLGTESSDDERRHRRKSSSSTRGRR
RPTTSAKSPRTPAQTKPMRKKRKSTATPKTATPPPRKRAKSAEHHLEDQL
LHQSESKQVAALKSRIEEMQASLEKLTASLRRKEKALSDLRTSGNVVTFA
PVKQDTVPIETMPQPFTGPLLSSDEFEHRVSAMRQLFEKLDDAAKDVHGK
RQELSAEQEKIRQHYGSLLDGVSDAQGKVVEHQKELAELLRGILVNRVAV
IDLRKHQAGNLIKTMSKRYKDMPNVSAYCNALYRGWKRQVVDYVHNNPGV
KDEERKKDKVPRSEGKENGAVHTPSGSQEDRPKGSDTPKRSKGSDGNGAA
EKDGDSAKDDSAKDGKGNGDVDSDVKSEPKAQDKMEVDSAAKKEGSWKEG
SAKDGSEDSAEKDAKEEQASDRKKMDLDTGPKKAVKKEKDAQAVKDASEE
KKTAPAGNGPDPGQTAAKQPVVAKKKSDEPRSSDKDAKMSEEKEEGSSGK
QDEGNCVEKPTPEAKDDKVEGKAAKAEDKKREGDKKGEHGGGAGAVKEAK
KVVEAKGEGGSKDGAKMDKKDGAAAGETKKAAAAKKEGAKV*