Ggra6322.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6322.t1
Unique NameGgra6322.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length364
Homology
BLAST of Ggra6322.t1 vs. uniprot
Match: A0A2V3IX70 (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX70_9FLOR)

HSP 1 Score: 590 bits (1522), Expect = 5.000e-211
Identity = 287/353 (81.30%), Postives = 310/353 (87.82%), Query Frame = 0
Query:    3 APNKEFSAHIEKMRSRVGIGFKKVHNPVGMYGARTFAPLGYDNSLNMDDFKDNLRIDVSFCDPDRVVFDMVHVDAPIANAIRRILLVEVPSVAVETVFVHSNSSIMHDEMFAHRLGLVPLRIDPRRLTVWNKGDAVDAGNTVKFSLKVRCEMNKGVSRDDEAPPDVLYKGHKVCSGDMKYVPMPGQVFEPSSMPVQDDIVIAKMRPGQEIHIEMNATKNIGKEHAKWSPVSTASYRLLPEVSIKREARGQLARGVKNLCPADVFDIEDDTAVVARPRDCTMCRECIREKPYSDHVELTRKRDHFVFDVESTGVMPADDLVVEALNVLTTKCDVVLRALELALKRNSGADSDAD 355
            A N +   HIEKMRSRVG+GFKKVHNPVG+YGARTF  LGYDNSLNMDDFK+NL I VSFCDPDRVVFD+VHVDAPIANAIRRILLVEVPS+AVETV+VHSN+SIMHDEM AHRLGL+PLRIDPR  TVW KGD V   NTVKFSLKVRCEMNK   RDDEAPPDVLYKGHKV SGDMKYVPMPGQ F     PV DDIV+AK+ PGQ+IHIEMNATKNIGKEHAKWSPVSTASYRLLPEV+I +EARGQLA G+KNLCPA+VFDIEDD AVV RPRDCTMCRECIRE P+SDHVELTRKRDHF+FDVESTGVMPAD LV +ALNVL  KCD+VL  L+ A+KR+SG DSD D
Sbjct:    2 ATNTQLPPHIEKMRSRVGVGFKKVHNPVGVYGARTFESLGYDNSLNMDDFKNNLEIQVSFCDPDRVVFDVVHVDAPIANAIRRILLVEVPSIAVETVYVHSNNSIMHDEMLAHRLGLIPLRIDPRSFTVWKKGDEVTTQNTVKFSLKVRCEMNKSAPRDDEAPPDVLYKGHKVYSGDMKYVPMPGQSFAVPPAPVHDDIVLAKLGPGQDIHIEMNATKNIGKEHAKWSPVSTASYRLLPEVTITKEARGQLAMGLKNLCPANVFDIEDDHAVVRRPRDCTMCRECIRETPFSDHVELTRKRDHFIFDVESTGVMPADSLVTQALNVLVEKCDMVLEGLDTAIKRSSGGDSDVD 354          
BLAST of Ggra6322.t1 vs. uniprot
Match: R7QCA5 (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCA5_CHOCR)

HSP 1 Score: 449 bits (1156), Expect = 4.070e-155
Identity = 220/365 (60.27%), Postives = 270/365 (73.97%), Query Frame = 0
Query:    1 MEAPNKEFSAHIEKMRSRVGIGFKKVHNPVGMYGARTFAPLGYDNSLNMDDFKDNLRIDVSFCDPDRVVFDMVHVDAPIANAIRRILLVEVPSVAVETVFVHSNSSIMHDEMFAHRLGLVPLRIDPRRLTVWNKGDAVDAGNTVKFSLKVRCEMNKGVSRDDEAPPDVLYKGHKVCSGDMKYVPMPGQ-----VFEPSSMPVQDDIVIAKMRPGQEIHIEMNATKNIGKEHAKWSPVSTASYRLLPEVSIKREARGQLARGVKNLCPADVFDIEDDTAVVARPRDCTMCRECIREKPYSDHVELTRKRDHFVFDVESTGVMPADDLVVEALNVLTTKCDVVLRALELALKRNSGADSDADMGNDD 360
            M A   +  +H+EK RSRVG+GFKK+ NPVG YGART+  LGYDNSL ++DFK+N  +++ FCD + V+FD+V  DAPIANA+RRILL EVP++A+E VFVH N+SIMHDE  AHRLGLVPL+IDPR    W KG  V   NTVK SL+ +CE N    RD EAPP VLYK   V SG +++VP  G      +      PV +DI++ K+RPGQEIH+EM+ATKNIG+EHAKWSPV+TA YR+LPEV++K    G  A+ + NLCPA VFDIEDD AVVARPRDCT+CRECIRE  + + VELTRKRDHF+F VESTG MPA  LV EAL+VLT KCD+VL AL+ ALK+ +  D+  D  N D
Sbjct:    1 MPATIGQLPSHLEKARSRVGVGFKKISNPVGTYGARTYQSLGYDNSLRLNDFKENCTLEILFCDDEEVLFDLVGTDAPIANALRRILLSEVPTLAIENVFVHRNTSIMHDEQLAHRLGLVPLKIDPRPFEYWEKGLPVTVANTVKLSLRTKCEFNPSAPRDGEAPPSVLYKNSSVLSGSIEHVPFGGHEQSKFIGNEVPRPVHEDILLCKLRPGQEIHVEMDATKNIGREHAKWSPVATAGYRMLPEVNLKTRVVGATAKRLVNLCPAKVFDIEDDVAVVARPRDCTVCRECIREPEWEERVELTRKRDHFIFSVESTGAMPAPTLVTEALSVLTGKCDLVLAALDAALKQRTTHDNGVDEENPD 365          
BLAST of Ggra6322.t1 vs. uniprot
Match: A0A3P3Y860 (DNA-directed RNA polymerases I and III subunit RPAC1 n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y860_PLABS)

HSP 1 Score: 298 bits (762), Expect = 1.550e-95
Identity = 160/335 (47.76%), Postives = 223/335 (66.57%), Query Frame = 0
Query:   11 HIEKMRSRVGIGFKKVHNPVGMYGARTFAPLGYDNSLNMDDFKDNLRIDVSFCDPDRVVFDMVHVDAPIANAIRRILLVEVPSVAVETVFVHSNSSIMHDEMFAHRLGLVPLRIDPRRLTVWNKGDAVDAGNTVKFSLKVRCEMNKGVSRDDEAPPDVLYKGHKVCSGDMKYVPMPGQ--VFEPSSMPVQD-DIVIAKMRPGQEIHIEMNATKNIGKEHAKWSPVSTASYRLLPEVSIKREARGQLARGVKNLCPADVFDIEDDTAVVARPRDCTMCRECIREKPY-SDHVELTRKRDHFVFDVESTGVMPADDLVVEALNVLTTKCDVVLRALE 341
            ++E +RSRV I      +  G+  A  F  L  DNSL++D F++ L+  V   +   +VF++V +DAPIANA+RR+L+ EVP++A+E V ++ N+SIM DE+ AHRLGLVP+  DPR++     G+     NT+ F+L V C  N   +  D  PP V Y    V S ++K+VP PGQ  +FE S   V D DI++ ++RPGQ + +E+   K IG+ HAKWSPV TASY+L PEV I R+  G  A  + N+CP +VFDIEDD AVVARP  CTMCRECIR+KP+ +D V+L R RDHF+F VESTG+   D+L+ EAL+VL +KC+ ++  L+
Sbjct:   33 NLEAIRSRVFIEAGVPTHTAGIDDALAFKSLNIDNSLDLDRFREGLKCSVLRLNEQEIVFELVGIDAPIANALRRVLIAEVPTIAIEKVNIYQNTSIMQDEVLAHRLGLVPILADPRKMEY--PGERATPQNTLVFTLVVTCTENPRATALD--PPHVRYINSNVYSRNLKWVPQPGQEEMFEGSPPRVVDGDILLCQLRPGQTLELELFCEKGIGQTHAKWSPVCTASYKLKPEVIIPRKLTGSTAEALVNVCPMNVFDIEDDQAVVARPDKCTMCRECIRDKPWGADGVQLRRIRDHFIFTVESTGIYRPDELLAEALDVLVSKCNTIVTCLD 363          
BLAST of Ggra6322.t1 vs. uniprot
Match: A0A7R9UKD6 (DNA-directed RNA polymerases I and III subunit RPAC1 n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UKD6_DIALT)

HSP 1 Score: 293 bits (751), Expect = 7.270e-94
Identity = 166/331 (50.15%), Postives = 212/331 (64.05%), Query Frame = 0
Query:   35 ARTFAPLGYDNSLNMDDFKDNLRIDVSFCDPDRVVFDMVHVDAPIANAIRRILLVEVPSVAVETVFVHSNSSIMHDEMFAHRLGLVPLRIDPRRLTVWNKGDAV-DAGNTVKFSLKVRCEMNKGVSRDDEAPPDVLYKGHKVCSGDMKYVPMPGQVF----EPSSMPVQDDIVIAKMRPGQEIHIEMNATKNIGKEHAKWSPVSTASYRLLPEVSIKREARGQLARGVKNLCPADVFDIED----DTAVVARPRDCTMCRECIREKPYSDHVELTRKRDHFVFDVESTGVMPADDLVVEALNVLTTKCDVVLRALELALKRNSGADSDADM 356
            A  +A LG DNSL++D+ +  +RIDV     D +VFD+V +DAPIANA+RRILLVEVP++A+E V+V +N+SI+ DE+ AHRLGL+P+R DP R     +GD+  +  NT+ F L  +C  N   S D E      Y G +V S  + +VP   Q      EP   PV DDI+IAK+RPGQEI +E    K +GK HAKWSPV+TASYRLLP ++  +   G LA  +K LCP DVFDIED     TAV ARPR CT+CREC+RE  +++ V L R RDHF+F VESTG MP D LV +AL VL  K    L   +L     + AD D DM
Sbjct:   40 AGVYASLGIDNSLDLDELRREVRIDVKSLTADEMVFDVVGIDAPIANALRRILLVEVPTMAIEKVWVLTNTSIIQDEVLAHRLGLIPIRADPARFE--ERGDSESNESNTLCFRLTAKCTHNADKSTDAEP-----YTGARVLSSQLTWVPQGDQAAGFAAEPPR-PVHDDILIAKLRPGQEIEVECWCEKGVGKTHAKWSPVATASYRLLPRITFHQPVHGPLAAELKALCPLDVFDIEDVAGVPTAVAARPRSCTVCRECVREPAWAERVSLQRVRDHFIFSVESTGAMPPDRLVRDALGVLKQKA---LDTAQLLKDTRAQADGDVDM 359          
BLAST of Ggra6322.t1 vs. uniprot
Match: A0A7S2ZMZ7 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZMZ7_9RHOD)

HSP 1 Score: 293 bits (749), Expect = 1.930e-93
Identity = 155/342 (45.32%), Postives = 221/342 (64.62%), Query Frame = 0
Query:   11 HIEKMRSRVGIGFKKVHNPVGMYGARTFAPLGYDNSLNMDDFKDNLRIDVSFCDPDRVVFDMVHVDAPIANAIRRILLVEVPSVAVETVFVHSNSSIMHDEMFAHRLGLVPLRIDPRRLTVWNKGDAVDAGNTVKFSLKVRCEMNKGVSRDDEAPPDVLYKGHKVCSGDMKYVPMPGQ--VF-EPSSMPVQDDIVIAKMRPGQEIHIEMNATKNIGKEHAKWSPVSTASYRLLPEVSIKREARGQLARGVKNLCPADVFDIEDD-TAVVARPRDCTMCRECIREKPYSDHVELTRKRDHFVFDVESTGVMPADDLVVEALNVLTTKCDVVLRALELALKRNS 348
            H+E+MRSRV +G K   N  G+Y +  ++ +G DNSL++ D +  L++ +   + DR+VF+++ +DAPIAN IRRILL EVP++A+E V   +NSS++H+E+ AHRLGL+PL +DP       +G      N +KF LKV+C     V    EA P + Y    V S  +++VP+  Q  VF      PV DDI+IAK+RPGQEI +E+ A K I K+HAKWSPV+TA YR+LP++ + +   G  A+ +K +CP++ FDIE+   AVV+RP  CTMCRECIR   + + V L+R RDHF+F +ESTG +  +DL + AL VL  KC  V+  L   L  +S
Sbjct:   16 HLERMRSRVEVGSKVPSNSEGVYYSGAYSSMGVDNSLSVSDLQKRLKVKILEKEKDRMVFELIGIDAPIANTIRRILLSEVPTMAIEKVSFFANSSVIHEEILAHRLGLIPLDVDPNLFDYMEEGAEPSELNALKFRLKVQCTKVAAVPA--EAKPSLKYHNSDVFSSMLEWVPIGEQAEVFGSKPPKPVNDDILIAKLRPGQEIDLEVLAVKGISKDHAKWSPVATAFYRMLPQIELLQSIEGADAKELKEMCPSNCFDIEESGKAVVSRPSTCTMCRECIRHGDWGEKVRLSRVRDHFIFSIESTGAIAPEDLFMRALQVLVDKCGNVVDRLNECLDVSS 355          
BLAST of Ggra6322.t1 vs. uniprot
Match: A0A8J4UZG2 (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4UZG2_9MYCE)

HSP 1 Score: 281 bits (718), Expect = 3.220e-89
Identity = 144/339 (42.48%), Postives = 206/339 (60.77%), Query Frame = 0
Query:   11 HIEKMRSRVGIGFKKVHNPVGMYGARTFAPLGYDNSLNMDDFKDNLRIDVSFCDPDRVVFDMVHVDAPIANAIRRILLVEVPSVAVETVFVHSNSSIMHDEMFAHRLGLVPLRIDPRRLTVWNKGDAVDAGNTVKFSLKVRCEMNKGVSRDDEAPPDVLYKGHKVCSGDMKYVPMPGQV-----FEPSSMPVQDDIVIAKMRPGQEIHIEMNATKNIGKEHAKWSPVSTASYRLLPEVSIKREARGQLARGVKNLCPADVFDIEDDTAVVARPRDCTMCRECIREKPYSDHVELTRKRDHFVFDVESTGVMPADDLVVEALNVLTTKCDVVLRALELAL 344
            ++E  R++V +G   + NP G Y +  +  +GYDNS N+ DFKDN ++ +    P  +VF+M  +DAPIANA RRI++ E+P++A+E V++ +N+SI+ DE+ AHRLGL+P+++DPR+           A +T+ F LKV+CE   G   + EA            S  + ++P   Q            PV+ DI I K+RPGQ I ++    KNIG+EH KWSPV TASYRLLP +++     G  A+ + N CP  VFDIEDD  V ARP DCTMCRECIRE  +   V+L R RDHF+F +ESTG + + ++  EAL +   KC++V  +L   L
Sbjct:   17 NLEDKRTKVTVGNAGLENPRGTYYSGAYTSIGYDNSFNLQDFKDNFKVKILSEKPYELVFEMSGIDAPIANAFRRIMISEIPTMAIEKVYIINNTSILQDEVLAHRLGLIPIKVDPRKFNFKLPNKEYTAEDTLIFQLKVKCEKEDGKIINAEA-----------LSKHLTWMPTEDQEEMFPDVNDQPRPVEGDIPIMKLRPGQCIDVQCYCEKNIGREHIKWSPVCTASYRLLPVITVDPSVTGDKAKELVNKCPKKVFDIEDDQVVAARPLDCTMCRECIREPEFEKTVKLQRVRDHFIFSIESTGALTSREIFQEALKIFIEKCNIVEESLNKLL 344          
BLAST of Ggra6322.t1 vs. uniprot
Match: L8H8M4 (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H8M4_ACACA)

HSP 1 Score: 279 bits (713), Expect = 2.200e-88
Identity = 146/339 (43.07%), Postives = 211/339 (62.24%), Query Frame = 0
Query:    9 SAHIEKMRSRVGIGFKKVHNPVGMYGARTFAPLGYDNSLNMDDFKDNLRIDVSFCDPDR--VVFDMVHVDAPIANAIRRILLVEVPSVAVETVFVHSNSSIMHDEMFAHRLGLVPLRIDPRRLTVWNKGDAVDAGNTVKFSLKVRCEMNKGVSRDDEAPPDVLYKGHKVCSGDMKYVPMPGQV---FEPSSMPVQDDIVIAKMRPGQEIHIEMNATKNIGKEHAKWSPVSTASYRLLPEVSIKREARGQLARGVKNLCPADVFDIEDD-TAVVARPRDCTMCRECIREKPYSDHVELTRKRDHFVFDVESTGVMPADDLVVEALNVLTTKCDVVLRALE 341
            S ++ + ++RVG        P   + + T+  LG DN  +++D   NL+I +    P    +VFD++ VDAP+ANA RRILL E+P++A+E V++H+N+SI+ DE+ AHRLGL+P+++DPR+      G+      T+ F LKVRC  +   +  +   P+  Y   KV S D+ + P+ GQ     +    PV DDI+IAK+RPGQEI +E    K  GKEHAKWSPVSTA YRLLP++   ++ +GQ A+ +   CP +VFDIED   A V   R+CTMCRECIRE  +   ++L R +DHF+F +ESTG++P + L  EA+ V   KC  VL  L+
Sbjct:   10 SENLHEKKTRVGFTNPAPVYPGTSFASDTYQSLGVDNKFDINDLMSNLKIKIIDYKPKEGLLVFDLIGVDAPVANAFRRILLSEIPTMAIEHVWIHNNTSIIQDEVLAHRLGLIPIKVDPRKFEFKKPGEEETDETTLVFKLKVRCTRSNNTNPQN---PEEAYVNSKVYSRDLIWEPVGGQAELFADDPPRPVHDDILIAKLRPGQEIEVECRCAKGEGKEHAKWSPVSTAYYRLLPDIKFVKDFKGQEAKKLVAKCPMNVFDIEDSGKAYVKNQRNCTMCRECIREDGWDKRIKLLRVKDHFIFSIESTGILPPNVLFEEAVKVFMAKCHTVLTELD 345          
BLAST of Ggra6322.t1 vs. uniprot
Match: F4Q915 (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q915_CAVFA)

HSP 1 Score: 276 bits (706), Expect = 2.920e-87
Identity = 149/338 (44.08%), Postives = 211/338 (62.43%), Query Frame = 0
Query:   12 IEKMRSRVGIGFKKVHNPVGMYGARTFAPLGYDNSLNMDDFKDNLRIDVSFCDPDRVVFDMVHVDAPIANAIRRILLVEVPSVAVETVFVHSNSSIMHDEMFAHRLGLVPLRIDPRRLTVWNKGDAVDAGNTVKFSLKVRCEMNKGVSRDDEAPPDVLYKGHKVCSGDMKYVP------MPGQVFEPSSMPVQDDIVIAKMRPGQEIHIEMNATKNIGKEHAKWSPVSTASYRLLPEVSI-KREARGQLARGVKNLCPADVFDIEDDTAVVA-RPRDCTMCRECIREKPYSDHVELTRKRDHFVFDVESTGVMPADDLVVEALNVLTTKCDVVLRALE 341
            +E  R+RV +G   V N  G+Y +  +  LGYDNS +++ FK N +I V    PD +VF+M+ VDAPIANA+RRIL+ E+P++A+E VF+ +N+SI+ DE+ AHRLGL+P+++DPR+           A +T+ F L VRC         DE    V      V SG +K+ P      M G+  E    PV DDI I K+RPGQ + I++   KNIG+EH KWSPV TASYRL+P++++   +   + A  +K  CP +VFDIED   V+A RP DCTMCRECIR+  + + V+L R RDHF++ +ES G +P   L  EA+ +L  KCD +  +L+
Sbjct:   25 LENQRTRVSVGNAGVENTRGVYYSGAYTSLGYDNSFSLERFKKNFQIKVLQDKPDHLVFEMIGVDAPIANALRRILIAEIPTMAIEKVFIINNTSILQDEVLAHRLGLIPIKVDPRKFNFKQASKEYTAEDTLIFKLNVRCYK-------DENGETV---NGTVTSGQLKWEPTEDQESMFGENPEDFPRPVHDDIPIVKLRPGQTVDIQLYCEKNIGREHIKWSPVGTASYRLMPDITVDSSKFDKKQAEKLKATCPKNVFDIEDSYQVIAARPLDCTMCRECIRDPEFENVVKLERIRDHFIYSIESLGALPPKVLFQEAIKILIEKCDDIENSLK 352          
BLAST of Ggra6322.t1 vs. uniprot
Match: A0A7S0DTL9 (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DTL9_9EUKA)

HSP 1 Score: 274 bits (701), Expect = 1.930e-86
Identity = 153/337 (45.40%), Postives = 212/337 (62.91%), Query Frame = 0
Query:   14 KMRSRVGIGFKKVHNPVGMYGARTFAPLGYDNSLNMDDFKDNLRIDVSFCDPDRVVFDMVHVDAPIANAIRRILLVEVPSVAVETVFVHSNSSIMHDEMFAHRLGLVPLRIDPRRLTVWN--KGDAVDAGNTVKFSLKVRCEMNKGVSRDDEAPPDVLYKGHKVCSGDMKYVPMPGQV--FEPSSM-PVQDDIVIAKMRPGQEIHIEMNATKNIGKEHAKWSPVSTASYRLLPEVSIKREARGQLARGVKNLCPADVFDIED----DTAVVARPRDCTMCRECIREKPYSDHVELTRKRDHFVFDVESTGVMPADDLVVEALNVLTTKCDVVLRALE 341
            + R+RV +  K V N   +   R FA +  DNSL +  FK  ++I V      +VVFD++ +DAP+AN +RRI++ EVP++A+ETV ++ N+S+M DE+ AHRLGL+P+  DPR  +  +  K   ++  NT+ F+L  +CE N   + +  AP D LY   +V SGD+K++P   Q   F    + PV DDI+I  +RPGQ I  E+ A K IG++HAKWSPV TASYRL+PE+  K++  G+ A  +   CP DVFDIED     TA VA PR+CTMCRECIR + + D + L R R+HF+F VESTG   A D+  EAL VL  K   + R LE
Sbjct:   15 RSRNRVVLTSKNVKNAFSVEDPRAFASISIDNSLTLASFKKKMKIRVIEEKDSKVVFDVIGIDAPLANTLRRIMIAEVPTMAIETVNLYQNTSVMQDEVLAHRLGLIPIEADPRDFSYVSEAKNREMNETNTLVFTLVAKCEKNPKAT-EASAPKD-LYIKSEVYSGDLKWIPQGSQEKRFGVGGIKPVFDDIIINHLRPGQSIEAELLAEKGIGQDHAKWSPVCTASYRLMPEILFKKKVEGKAAEELVRKCPMDVFDIEDIGGTKTARVAYPRNCTMCRECIRGEEWEDKILLQRIRNHFIFSVESTGAYKARDIFTEALKVLKNKATKLKRELE 349          
BLAST of Ggra6322.t1 vs. uniprot
Match: A0A152A5F4 (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A5F4_9MYCE)

HSP 1 Score: 273 bits (698), Expect = 3.880e-86
Identity = 142/337 (42.14%), Postives = 211/337 (62.61%), Query Frame = 0
Query:   11 HIEKMRSRVGIGFKKVHNPVGMYGARTFAPLGYDNSLNMDDFKDNLRIDVSFCDPDRVVFDMVHVDAPIANAIRRILLVEVPSVAVETVFVHSNSSIMHDEMFAHRLGLVPLRIDPRRLTVWNKGDAVDAGNTVKFSLKVRCEMNKGVSRDDEAPPDVLYKGHKVCSGDMKYVPMPGQ--VFEPSSM----PVQDDIVIAKMRPGQEIHIEMNATKNIGKEHAKWSPVSTASYRLLPEVSIKREARGQLARGVKNLCPADVFDIEDDTAV-VARPRDCTMCRECIREKPYSDHVELTRKRDHFVFDVESTGVMPADDLVVEALNVLTTKCDVVLRAL 340
            ++E  R+RV +      NP G Y +  +  LGYDNS N++ FKDN  I++    P  +VF+M+ VDAPIANA+RRIL+ EVP++A+E V++ +N+S++ DE+ AHRLGL+P+++DPR+           A +T+ FSLKV+CE         +     +  G  + S  ++++P   Q  +F    M    P  DDI I K++PGQ I ++    KNIG+EH KWSPV TASYRLLP +++    +G+ A+ +++ CP  VFDIED   +  ARP DCTMCRECIR+  +   V+L R RDHF+F +ESTG + + +L  EAL +   KC+++  +L
Sbjct:   18 NLENKRTRVTVTNPGTENPRGTYYSGAYTSLGYDNSFNLESFKDNFSINILSEKPYELVFEMIGVDAPIANALRRILIAEVPTMAIEKVYIINNTSLIQDEVLAHRLGLIPIKVDPRKFNFKLPNKEYTADDTLIFSLKVKCE---------KLADGTIVNGTAL-SKHLQWMPTEDQQEMFGSDPMDHPRPFDDDIPIMKLKPGQTIEVQCYCEKNIGREHIKWSPVCTASYRLLPSITVDPSVKGEKAKILQSKCPQKVFDIEDSGQIYAARPLDCTMCRECIRDPEFEPKVKLERIRDHFIFSIESTGALTSRELFQEALKIFVEKCNIIETSL 344          
The following BLAST results are available for this feature:
BLAST of Ggra6322.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IX705.000e-21181.30DNA-directed RNA polymerases I and III subunit RPA... [more]
R7QCA54.070e-15560.27DNA-directed RNA polymerases I and III subunit RPA... [more]
A0A3P3Y8601.550e-9547.76DNA-directed RNA polymerases I and III subunit RPA... [more]
A0A7R9UKD67.270e-9450.15DNA-directed RNA polymerases I and III subunit RPA... [more]
A0A7S2ZMZ71.930e-9345.32Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A8J4UZG23.220e-8942.48Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
L8H8M42.200e-8843.07DNA-directed RNA polymerases I and III subunit RPA... [more]
F4Q9152.920e-8744.08DNA-directed RNA polymerases I and III subunit RPA... [more]
A0A7S0DTL91.930e-8645.40DNA-directed RNA polymerases I and III subunit RPA... [more]
A0A152A5F43.880e-8642.14DNA-directed RNA polymerases I and III subunit RPA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011263DNA-directed RNA polymerase, RpoA/D/Rpb3-typeSMARTSM00662rpoldneu2coord: 67..339
e-value: 3.9E-75
score: 265.6
IPR011263DNA-directed RNA polymerase, RpoA/D/Rpb3-typePFAMPF01193RNA_pol_Lcoord: 70..333
e-value: 1.2E-20
score: 73.6
IPR011262DNA-directed RNA polymerase, insert domainPFAMPF01000RNA_pol_A_baccoord: 101..230
e-value: 2.8E-23
score: 82.4
IPR036643DNA-directed RNA polymerase, insert domain superfamilyGENE3D2.170.120.12coord: 93..227
e-value: 6.9E-97
score: 326.1
IPR036643DNA-directed RNA polymerase, insert domain superfamilySUPERFAMILY56553Insert subdomain of RNA polymerase alpha subunitcoord: 92..231
IPR036603RNA polymerase, RBP11-like subunitGENE3D3.30.1360.10coord: 58..332
e-value: 6.9E-97
score: 326.1
IPR036603RNA polymerase, RBP11-like subunitSUPERFAMILY55257RBP11-like subunits of RNA polymerasecoord: 54..340
NoneNo IPR availablePANTHERPTHR11800DNA-DIRECTED RNA POLYMERASEcoord: 7..341
IPR033901DNA-directed RNA polymerases I and III subunit AC40PANTHERPTHR11800:SF13DNA-DIRECTED RNA POLYMERASES I AND III SUBUNIT RPAC1coord: 7..341
IPR033901DNA-directed RNA polymerases I and III subunit AC40CDDcd07032RNAP_I_II_AC40coord: 56..338
e-value: 4.87845E-127
score: 364.608

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000096_piloncontigtig00000096_pilon:100459..101550 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6322.t1Ggra6322.t1Gracilaria gracilis GNS1m malemRNAtig00000096_pilon 100459..101550 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6322.t1 ID=Ggra6322.t1|Name=Ggra6322.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=364bp
MEAPNKEFSAHIEKMRSRVGIGFKKVHNPVGMYGARTFAPLGYDNSLNMD
DFKDNLRIDVSFCDPDRVVFDMVHVDAPIANAIRRILLVEVPSVAVETVF
VHSNSSIMHDEMFAHRLGLVPLRIDPRRLTVWNKGDAVDAGNTVKFSLKV
RCEMNKGVSRDDEAPPDVLYKGHKVCSGDMKYVPMPGQVFEPSSMPVQDD
IVIAKMRPGQEIHIEMNATKNIGKEHAKWSPVSTASYRLLPEVSIKREAR
GQLARGVKNLCPADVFDIEDDTAVVARPRDCTMCRECIREKPYSDHVELT
RKRDHFVFDVESTGVMPADDLVVEALNVLTTKCDVVLRALELALKRNSGA
DSDADMGNDDQVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011263DNA-dir_RNA_pol_RpoA/D/Rpb3
IPR011262DNA-dir_RNA_pol_insert
IPR036643RNApol_insert_sf
IPR036603RBP11-like
IPR033901RNAPI/III_AC40