Ggra628.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra628.t1
Unique NameGgra628.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length368
Homology
BLAST of Ggra628.t1 vs. uniprot
Match: A0A2V3IK31 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK31_9FLOR)

HSP 1 Score: 332 bits (851), Expect = 5.840e-109
Identity = 186/327 (56.88%), Postives = 226/327 (69.11%), Query Frame = 0
Query:    1 MGSGKGWSVIETKSACRAFIAASEDPLSGAENKREKFLGQIETAYKLLIEEYKETDNKAIFFVRTGSAIAQRYKKARCECIKFEGIVMSIQAKRPTGSPTEHDIVRAATAVYNGQANISNMYSYFQDSPLEYGDKFVFLDALTFFRNTNQWEMLMSSKKPVNREETVEKTGSDNRGHGGVESGIDRNGSNSGKDEHEEPKERPSHNYGLNGTGIVGSSKRAHFMANQVKALQRGAEGIEELARAAKRRNTVAEVFLAVERQKSMFTFFSLPDVDVEMRKKYMNAVAQKALAEVEKAAALQDQ-----DSLPYHVPNSSSFMQPEESD 322
            MGS K WS IETK ACRA+I ASEDP +GA  KREKF  QIETAY   +EE K+ D   + F  T S IAQRYKKARCECI FEGIVM+++ K+PTG PTE DI RA TAVYNG+ N+SNMYS+ +D+ LEYGDKF F D L FFR +NQWE++M SKK   +E T +K+ + +     V S I   G  S +  +  P    +   G+    +VGS KRA  MANQVKALQRGAEGIEELARA K+RN VAE FLAVE+Q+S+FT FSLP+V+  +R+KY+ A+AQKA+ EVE +  +  Q      S     PNSSSFMQPE SD
Sbjct:    1 MGSSKDWSTIETKCACRAYIGASEDPFAGAGKKREKFYKQIETAYTAFLEEAKQKDEALVTFTLTASTIAQRYKKARCECITFEGIVMAMKEKKPTGLPTEEDIFRATTAVYNGKGNMSNMYSHLRDTSLEYGDKFEFFDVLFFFRKSNQWELVMMSKKQEKQEVTKDKSEAKSSVQHDVGSII---GDPSDRQTNTSPIVSANEGSGVKKGSMVGS-KRAQIMANQVKALQRGAEGIEELARAEKKRNVVAEQFLAVEKQRSLFTLFSLPEVNETVRRKYIKAMAQKAIEEVESSVKVGSQRKNSIGSRSDCYPNSSSFMQPEHSD 323          
BLAST of Ggra628.t1 vs. uniprot
Match: A0A2V3IXY9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXY9_9FLOR)

HSP 1 Score: 200 bits (508), Expect = 3.250e-60
Identity = 101/145 (69.66%), Postives = 112/145 (77.24%), Query Frame = 0
Query:    1 MGSGKGWSVIETKSACRAFIAASEDPLSGAENKREKFLGQIETAYKLLIEEYKETDNKAIFFVRTGSAIAQRYKKARCECIKFEGIVMSIQAKRPTGSPTEHDIVRAATAVYNGQANISNMYSYFQDSPLEYGDKFVFLDALTFF 145
            MGSGKGWS IETK ACRA+ AASEDP  GA  KR+KF  QIETAY  + EE K+ D   + F RT SAIAQRY KARCECIKFEGIVM+I+ K+PTGSPTE +I RAATAVYN + N+SNMYSY  DS LEYGD F FLD L FF
Sbjct:    1 MGSGKGWSTIETKCACRAYTAASEDPFPGAGKKRKKFYKQIETAYTAIFEEAKQKDEALVTFTRTASAIAQRYNKARCECIKFEGIVMAIKEKKPTGSPTE-EIFRAATAVYNSEGNMSNMYSYLPDSCLEYGDNFEFLDVLFFF 144          
BLAST of Ggra628.t1 vs. uniprot
Match: A0A2V3IEA4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEA4_9FLOR)

HSP 1 Score: 147 bits (372), Expect = 1.030e-38
Identity = 101/210 (48.10%), Postives = 123/210 (58.57%), Query Frame = 0
Query:  118 ISNMYSYFQDSPLEYGDKFVFLDALTFFRNTNQWEMLMSSKKPVNREETVEKTGSDNRGHGGVESGIDRNGSNSGKDEHEEPKERPSHNYGLNGTGIVGSSKRAHFMANQVKALQRGAEGIEELARAAKRRNTVAEVFLAVERQKSMFTFFSLPDVDVEMRKKYMNAVAQKALAEVEKAAALQDQ-----DSLPYHVPNSSSFMQPEESD 322
            +SN YSY + S L+YGD F FLD L F RN NQWE+ M SKK    E   +K  +       V+S I   G  S K  +  P    +   G+    +VGS KRAH M +QVK LQR AEGIEELARAAK+R  V E  LA E Q S+FT  SL  V+  +RKKY+N+ AQKA+ EVE++  +  Q      S     PNSSSFMQPE SD
Sbjct:    1 MSNKYSYLRGSSLKYGDNFEFLDVLFFLRNCNQWELEMMSKKQEKWEVDKDKFEAKTSLQLDVDSII---GKPSDKQRNTSPIISANEWSGVKKGSMVGS-KRAHIMKSQVKLLQREAEGIEELARAAKKRKVVGEQRLAFEEQSSLFTLLSLLSVNKILRKKYINSTAQKAIQEVERSVKIWSQCKNGFSSRSDCYPNSSSFMQPEPSD 206          
BLAST of Ggra628.t1 vs. uniprot
Match: A0A2V3IPE3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPE3_9FLOR)

HSP 1 Score: 131 bits (329), Expect = 7.020e-33
Identity = 90/204 (44.12%), Postives = 119/204 (58.33%), Query Frame = 0
Query:  155 MSSKKPVNREETVEKTGSDNRGHGGVESGIDRNGSNSGKDEHEEPKERPSHNYGLNGTGIVGSSKRAHFMANQVKALQRGAEGIEELARAAKRRNTVAEVFLAVERQKSMFTFFSLPDVDVEMRKKYMNAVAQKALAEVEKAAALQDQ-----DSLPYHVPNSSSFMQPEESDTVRIETSSSRSAQGAATPTKSSVRDPPSAAN 353
            M SKKP  +    EK    +R  G +   +  +G +  K   +      S  +GL    I+GS KR +FM NQVK L++GAEGIEELA AAK+RN VAE FLAVE+Q S+FT FSLP++   MR++Y NA+AQ A+ EV     +Q Q     +S+ Y  PNSSSFMQ +     R E+ + ++  GA  PT     DPPSA N
Sbjct:    1 MISKKPGKQAVENEKFIGTSRVEGYI---VSIHGESPDKKSQDIKTSSSSDRFGLKNNNIIGS-KRTYFMENQVKVLEQGAEGIEELAGAAKKRNVVAEQFLAVEKQWSLFTLFSLPEIYPRMRQRYPNAMAQSAIKEVGNKFEVQTQADIDINSMSYRKPNSSSFMQAD-----RSESGTQKALGGAPPPTILRAGDPPSAPN 195          
BLAST of Ggra628.t1 vs. uniprot
Match: A0A2V3IPE1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPE1_9FLOR)

HSP 1 Score: 91.3 bits (225), Expect = 2.170e-19
Identity = 47/78 (60.26%), Postives = 56/78 (71.79%), Query Frame = 0
Query:   27 LSGAENKREKFLGQIETAYKLLIEEYKETDNKAIFFVRTGSAIAQRYKKARCECIKFEGIVMSIQAKRPTGSPTEHDI 104
            + GA NKRE F  QI+ +Y LLI E K+ +   + F RTGSAI Q YKKARCE IKFEG VM+I+AK PTGS +E DI
Sbjct:    1 MPGAGNKRENFENQIKNSYALLIREGKKRNQILVTFTRTGSAIVQIYKKARCEFIKFEGSVMAIRAKTPTGSTSEDDI 78          
The following BLAST results are available for this feature:
BLAST of Ggra628.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IK315.840e-10956.88Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IXY93.250e-6069.66Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IEA41.030e-3848.10Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IPE37.020e-3344.12Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IPE12.170e-1960.26Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 228..248
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 162..212
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..204
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 302..367
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 305..348

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000895_piloncontigtig00000895_pilon:140230..141333 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra628.t1Ggra628.t1Gracilaria gracilis GNS1m malemRNAtig00000895_pilon 140230..141333 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra628.t1 ID=Ggra628.t1|Name=Ggra628.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=368bp
MGSGKGWSVIETKSACRAFIAASEDPLSGAENKREKFLGQIETAYKLLIE
EYKETDNKAIFFVRTGSAIAQRYKKARCECIKFEGIVMSIQAKRPTGSPT
EHDIVRAATAVYNGQANISNMYSYFQDSPLEYGDKFVFLDALTFFRNTNQ
WEMLMSSKKPVNREETVEKTGSDNRGHGGVESGIDRNGSNSGKDEHEEPK
ERPSHNYGLNGTGIVGSSKRAHFMANQVKALQRGAEGIEELARAAKRRNT
VAEVFLAVERQKSMFTFFSLPDVDVEMRKKYMNAVAQKALAEVEKAAALQ
DQDSLPYHVPNSSSFMQPEESDTVRIETSSSRSAQGAATPTKSSVRDPPS
AANDVHCETGDSSTHQG*
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