Ggra5596.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5596.t1
Unique NameGgra5596.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length476
Homology
BLAST of Ggra5596.t1 vs. uniprot
Match: A0A2V3IDC9 (F-box domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDC9_9FLOR)

HSP 1 Score: 571 bits (1471), Expect = 1.200e-200
Identity = 285/411 (69.34%), Postives = 322/411 (78.35%), Query Frame = 0
Query:   75 MFNFSKPAARPRSASDQQIQVLTDLDNHHR--PDHSQIPCPRDHQQQLQPRHLPLHQ-----CTDVVHHSHDLRDDDDAASHLFPF---HEPMLGSPSTAAKRMRSCADSDTGSSSCRDFDEPEVVAPDSVPALVHDVKRMLEYVSSKPSLQTGSASFLRDYLRTMLMQNAHSASEAIQAASKAHRAEVIAGRRKSREPFNKIPDEIAKHVFGFLGGRDLARAREVCKRWNDFASEERLWKRLCTQNWRSLETDHYLWRILDKEISPGDPNCWRNIYPKIEKTPKWTCRLQKTGRFICNLIAHQISGTPIGDVGLPNVLVVERRFNIVHLQTFILNDASVLYFEPESEEDRHGFDEFIEYLNKRTRAGLALEEQRRFIFIPPCDYTRTKIEYHGRSLLGVVQNAYNPLGPL 475
            MFNFSKP+ RPR++SD  + +L+ L    R  P              L P   P  Q     CTDVVHHSHDL+DDDD  SHLF       P+  +P+T  KRMR+C D           D PEVVAPDSVPALV+DV+ ML+YV+SKPSLQ GSASFLRDYLRTML+QNAHSA+EAI AA+KAHRAEV+AGRRKSREPF  IPDE AKH+F FLGGRDLARAREVC RWN F SEE LW++LC  NW +LE+D  +W ++D+ I  G  NCWR+IYPKIE  PKWTCRLQKTGRF+CNL+AHQISGTP+GDVGLP VLVVERRFNIVHLQTF+L+DA+VLYFEPESE DRHGFDEFIEYLNKRTRAGLALE+QRRFIFIPPCDYTRT+I YHGRSLLGVVQNAYNPLGPL
Sbjct:    1 MFNFSKPSTRPRASSDHHLHLLSHLPETPRSHPHXXXXXXXXXXXXXLPPFRHPNSQTHHPPCTDVVHHSHDLQDDDDPVSHLFAAAAAQNPLPDTPATGPKRMRACPDHPRNH-----IDHPEVVAPDSVPALVNDVRNMLDYVASKPSLQNGSASFLRDYLRTMLLQNAHSATEAIHAANKAHRAEVMAGRRKSREPFKSIPDETAKHIFSFLGGRDLARAREVCTRWNRFGSEEGLWRKLCLANWSALESDPAVWSLIDRCIPLGSYNCWRSIYPKIENIPKWTCRLQKTGRFVCNLVAHQISGTPVGDVGLPKVLVVERRFNIVHLQTFVLHDAAVLYFEPESEADRHGFDEFIEYLNKRTRAGLALEDQRRFIFIPPCDYTRTQINYHGRSLLGVVQNAYNPLGPL 406          
BLAST of Ggra5596.t1 vs. uniprot
Match: S0F3M8 (F-box domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F3M8_CHOCR)

HSP 1 Score: 470 bits (1209), Expect = 1.770e-159
Identity = 258/456 (56.58%), Postives = 320/456 (70.18%), Query Frame = 0
Query:   34 ALRPPPSSTVASLPSRLA--SPPSPQRPA----QPRAPIS-------RKRPASLMFNFSKPAARPRSASDQQIQVLTDLDNHHRPDHSQIPCPRDHQQQLQPRHLPLHQCTDVVHHSHDLRDDDD--AASHLFPFHEPMLGSPSTAAKRMRSCADSDTGSSSCRDFDEPEVVAPDSVPALVHDVKRMLEYVSSKPSLQTGSASFLRDYLRTMLMQNAHSASEAIQAASKAHRAEVIAGRRKSREPFNKIPDEIAKHVFGFLGGRDLARAREVCKRWNDFASEERLWKRLCTQNWRSLETDHYLWRILDKEISPGDPNCWRNIYPKIEKTPKWTCRLQKTGRFICNLIAHQISGTPIGDVGLPNVLVVERRFNIVHLQTFILNDASVLYFEPESEEDRHGFDEFIEYLNKRTRAGLALEEQRRFIFIPPCDYTRTKIEYHGRSLLGVVQNAYNPLGP 474
            A+RP P   ++ LPS LA  + P+P+  A    QP A  S       RKRPASLM +  KP    + A D++IQ+       +RP+H +IP         QP               H LR DD+   A  L         SP    KRMRS ADSD GSSSC+D D+PE++APDSVPALV  ++++L+Y++SKPSLQ GSASF+RDYLRTM++ N+++A +AIQ ++K H+ EV AGRRK  E F  IPDE+AKH+FGFL G+ LARAREVC RWNDFA EE LWK LC + W++LE+D  LW+++DK++ P  PNCWR I+PK+  T +W CRLQKTGRFICNL+AHQISGTP+   GLP VLVVERRFNI+HLQTF+  DAS+LYFEPE   DR GFD+FI+YLNKRTRAGLALE Q RFIFIPPCDYTRT++EY G+SLLGVVQ+AY PL P
Sbjct:   76 AIRPRPEG-LSGLPSDLAPLAAPAPEAIASHFSQPSASFSLTPRLNSRKRPASLMMDLDKPGRPSQIAPDREIQM-------NRPNH-RIP--------RQP--------------VHPLRHDDELSTAQRLCDVTLDSPSSPGGGYKRMRSSADSDAGSSSCKDMDDPEIMAPDSVPALVMQLRQLLDYIASKPSLQHGSASFVRDYLRTMVLSNSYAAEKAIQESNKEHKLEVYAGRRKPSECFKFIPDELAKHIFGFLEGKHLARAREVCHRWNDFACEEPLWKSLCLKKWKALESDKDLWKLVDKDVDPEGPNCWRKIFPKVSNTSQWRCRLQKTGRFICNLVAHQISGTPLLG-GLPEVLVVERRFNILHLQTFVRPDASILYFEPELASDRTGFDDFIDYLNKRTRAGLALEGQLRFIFIPPCDYTRTQVEYPGQSLLGVVQHAY-PLVP 498          
BLAST of Ggra5596.t1 vs. uniprot
Match: A0A2V3IDD9 (F-box domain-containing protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDD9_9FLOR)

HSP 1 Score: 393 bits (1009), Expect = 3.560e-131
Identity = 191/311 (61.41%), Postives = 238/311 (76.53%), Query Frame = 0
Query:  161 PSTAAKRMRSCADSDTGSSSCRDFDEPEVVAPDSVPALVHDVKRMLEYVSSKPSLQTGSASFLRDYLRTMLMQNAHSASEAIQAASKAHRAEVIAGRRKSREPFNKIPDEIAKHVFGFLGGRDLARAREVCKRWNDFASEERLWKRLCTQNWRSLETDHYLWRILDKEISPGDPNCWRNIYPKIEKTPKWTCRLQKTGRFICNLIAHQISGTPIGDVGLPNVLVVERRFNIVHLQTFILNDASVLYFEPESEEDRHGFDEFIEYLNKRTRAGLALEEQRRFIFIPPCDYTRTKIEYHGRSLLGVVQNAYNP 471
            PS + KR+R+  DSD  SSS +D DE E  +PDSVPALVH +  +L YV+ KPSL   SASFLRD LRT+L+QN  +A +++ A S+AH+A V AG  + ++ F  +PDEI KH+F FL G +LA  REVC +WN FAS E+ WK L T+ WRSLETD   W+++D  +    PN WR IYPK    PKW CRLQKTGRF+CNL+AHQI G PIGD GLP+VLVVERRFN+ HLQ F++++ASVLYFEPESE+DR G+++FIEYL KRTRAGLAL++Q+RFIFIPPC+YTRT ++Y GRSLLGVVQ AY P
Sbjct:   59 PSPSCKRLRA-TDSDA-SSSVKDMDEAEHFSPDSVPALVHQLHNLLNYVARKPSLHHASASFLRDSLRTLLLQNEKAAVDSLTAVSRAHKAGVAAGVCERQQLFGLLPDEITKHIFSFLDGPNLAICREVCSKWNAFASCEKQWKTLVTRKWRSLETDVDAWKLIDSSVDVNAPNRWRMIYPKASAIPKWRCRLQKTGRFMCNLVAHQIRGAPIGDAGLPDVLVVERRFNLQHLQAFVMSEASVLYFEPESEQDRGGYEDFIEYLIKRTRAGLALDDQQRFIFIPPCEYTRTHVKYEGRSLLGVVQMAYPP 367          
BLAST of Ggra5596.t1 vs. uniprot
Match: A0A2V3IY22 (F-box domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY22_9FLOR)

HSP 1 Score: 320 bits (821), Expect = 4.550e-105
Identity = 143/208 (68.75%), Postives = 170/208 (81.73%), Query Frame = 0
Query:  264 FNKIPDEIAKHVFGFLGGRDLARAREVCKRWNDFASEERLWKRLCTQNWRSLETDHYLWRILDKEISPGDPNCWRNIYPKIEKTPKWTCRLQKTGRFICNLIAHQISGTPIGDVGLPNVLVVERRFNIVHLQTFILNDASVLYFEPESEEDRHGFDEFIEYLNKRTRAGLALEEQRRFIFIPPCDYTRTKIEYHGRSLLGVVQNAYNP 471
            F+ + D++ +HVF FLG R+LARAREVC RWN  A  E LWK+LC  +W +LETD  LW+++D+ IS  D NCWRN+YPKIE  PKWTC LQKT  F+CNL+AHQ+SGTP+GDVGLP VLVVERRF+IVHLQTF L+DA+VLYFEPESE DRHGFDEFIEYL++R RAGLALE +RRF+  PPCDY R ++ YHGRSLLG VQ AY P
Sbjct:    3 FDHLYDKLVRHVFQFLGARELARAREVCSRWNALAGGEHLWKKLCVADWAALETDQELWQLIDRAISLDDANCWRNMYPKIENIPKWTCCLQKTRSFVCNLVAHQVSGTPVGDVGLPKVLVVERRFSIVHLQTFALHDAAVLYFEPESEADRHGFDEFIEYLSQRARAGLALEAERRFVLFPPCDYGRIQLGYHGRSLLGFVQYAYPP 210          
BLAST of Ggra5596.t1 vs. uniprot
Match: A0A7S1XDB5 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XDB5_9RHOD)

HSP 1 Score: 324 bits (831), Expect = 3.010e-102
Identity = 157/294 (53.40%), Postives = 211/294 (71.77%), Query Frame = 0
Query:  183 DFDEPEVVAPDSVPALVHDVKRMLEYVSSKPSLQTGSASFLRDYLRTMLMQNAHSASE--AIQAASKAHRAEVIAGRRKSREPFNKIPDEIAKHVFGFLGGRDLARAREVCKRWNDFASEERLWKRLCTQNWRSLETDHYLWRILDKEISPGDPNCWRNIYPKIEKTPKWTCRLQKTGRFICNLIAHQISGTPIGDVGLPNVLVVERRFNIVHLQTFILNDASVLYFEPESEEDRHGFDEFIEYLNKRTRAGLALEEQRRFIFIPPCDYTRTKIEYHGRSLLGVVQNAYNPLGP 474
            D +  E V  DSV  +V ++ +++ YV SKP++Q GSASF+RDYLRT+L+  A S  +  A+  +S A+              F  +P E+ K +FGFL G DLA  R VC++W++FA +E  WKRLC + WR+L  D  LW+++D  ++PG  + WR I+P I ++P+W C LQKTGRFIC+L+AHQISG+P+G+ GLP+ LVVERRFNI HLQTF+L DASVLYFEPE+E+DR G+D+FIEYL KRTRAGLAL+ +RRFIFIPPC+++R    Y G +LLGV Q A+ PL P
Sbjct:  243 DLNIAEGVPGDSVYRMVAELTKLISYVRSKPTVQEGSASFIRDYLRTLLVHTALSDLDDPALLPSSGANF-------------FEDLPGELTKRIFGFLEGDDLAMVRLVCRKWDEFARDEEFWKRLCMKRWRALNNDAALWKLVDPNVAPGQVDSWRRIFPSISRSPQWRCTLQKTGRFICHLVAHQISGSPLGEGGLPHTLVVERRFNIAHLQTFVLPDASVLYFEPENEKDRSGYDDFIEYLVKRTRAGLALDNERRFIFIPPCEFSRAH-GYDGSALLGVAQEAHMPLLP 522          
BLAST of Ggra5596.t1 vs. uniprot
Match: A0A7S2ZYW3 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZYW3_9RHOD)

HSP 1 Score: 317 bits (812), Expect = 4.000e-101
Identity = 146/282 (51.77%), Postives = 200/282 (70.92%), Query Frame = 0
Query:  193 DSVPALVHDVKRMLEYVSSKPSLQTGSASFLRDYLRTMLMQNAHSASEAIQAASKAHRAEVIAGRRKSREPFNKIPDEIAKHVFGFLGGRDLARAREVCKRWNDFASEERLWKRLCTQNWRSLETDHYLWRILDKEISPGDPNCWRNIYPKIEKTPKWTCRLQKTGRFICNLIAHQISGTPIGDVGLPNVLVVERRFNIVHLQTFILNDASVLYFEPESEEDRHGFDEFIEYLNKRTRAGLALEEQRRFIFIPPCDYTRTKIEYHGRSLLGVVQNAYNPLGP 474
            DSVP +V +++++L+Y+S+ P L+ GSASF+RDYLRT+LM +++SA   I        A  +      +     +P+E+ K +F FL G DLA  R VCK+WN+F+ E+R W+ LC + W SL+TD   WR++D+ +   DP+ WR IYPK+   P+W CRLQKTG+FICNL AHQI G  +GD GLP  LVVERRF+++HL  F+L +A++LYFEP + EDR GF++FI+YL KR+RAGLALE  RRFIF+PPC Y++ K+ Y G SLLGVVQ  + PL P
Sbjct:  118 DSVPCMVQELEKLLQYISAHPKLREGSASFMRDYLRTLLMVSSNSAETEI--------ARKMQDSSSPKASIEGLPNELVKLIFSFLDGPDLANVRLVCKQWNEFSCEDRFWRELCIRLWPSLDTDKSTWRLIDEAVEATDPSKWRKIYPKVANRPRWKCRLQKTGKFICNLNAHQIRGPGLGDQGLPYTLVVERRFSLLHLNQFVLPEATMLYFEPVTPEDRPGFEQFIDYLVKRSRAGLALEGDRRFIFVPPCHYSQEKVNYDGHSLLGVVQILFPPLQP 391          
BLAST of Ggra5596.t1 vs. uniprot
Match: A0A7S1XH60 (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XH60_9RHOD)

HSP 1 Score: 314 bits (804), Expect = 6.610e-101
Identity = 157/315 (49.84%), Postives = 216/315 (68.57%), Query Frame = 0
Query:  168 MRSCADSDTGSSS-------CRDFDEPEVVAPDSVPALVHDVKRMLEYVSSKPSLQTGSASFLRDYLRTMLMQNAHSASEAIQAASKAHRAEVIAG---RRKSREPFNKIPDEIAKHVFGFLGGRDLARAREVCKRWNDFASEERLWKRLCTQNWRSLETDHYLWRILDKEISPGDPNCWRNIYPKIEKTPKWTCRLQKTGRFICNLIAHQISGTPIGDVGLPNVLVVERRFNIVHLQTFILNDASVLYFEPESEEDRHGFDEFIEYLNKRTRAGLALEEQRRFIFIPPCDYTRTKIEYHGRSLLGVVQNAYNPL 472
            MR  AD+D G+ S       C +  +  +   DS   L  ++++++ + +    L+TG+ASF+RD++RT+L+ ++ +A +AI+  S+   +  ++    +      FN + D I + V   L G DL+RAR+VCKRW+ FAS+ERLWK LC   WR+LE+D  LW ++D  I   DP  WR IYP +    +WTCRLQKTGRF+C+L+AHQISG P+G+ GLP+ LVVERRFNI HLQTF+L +ASVLYFEP  +EDR G++EFI YL +RTRAGLALE+ RRFIFIPPC Y++ ++ Y G SLLGVVQ AY PL
Sbjct:    1 MRRVADADDGAESISSVVSGCSERRDSILAELDSALELTRELQKLIVFATRSDVLRTGTASFMRDHIRTLLVVSSANADKAIRLVSEERCSRGVSSELIKPSDGGLFNSLGDSIIQRVMQALDGEDLSRARQVCKRWSSFASDERLWKHLCLSVWRALESDSALWAVIDASIQLSDPARWRKIYPSVRWRKRWTCRLQKTGRFVCDLVAHQISGGPLGEKGLPSTLVVERRFNISHLQTFVLPEASVLYFEPAKDEDRAGYEEFIAYLLRRTRAGLALEDHRRFIFIPPCAYSK-QLNYLGPSLLGVVQIAYPPL 314          
BLAST of Ggra5596.t1 vs. uniprot
Match: A0A7S0G2G1 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G2G1_9RHOD)

HSP 1 Score: 306 bits (784), Expect = 1.190e-98
Identity = 141/277 (50.90%), Postives = 200/277 (72.20%), Query Frame = 0
Query:  198 LVHDVKRMLEYVSSKPSLQTGSASFLRDYLRTMLMQNAHSASEAIQAASKAHRAEVIAGRRKSREPFNKIPDEIAKHVFGFLGGRDLARAREVCKRWNDFASEERLWKRLCTQNWRSLETDHYLWRILDKEISPGDPNCWRNIYPKIEKTPKWTCRLQKTGRFICNLIAHQISGTPIGDVGLPNVLVVERRFNIVHLQTFILNDASVLYFEPESEEDRHGFDEFIEYLNKRTRAGLALEEQRRFIFIPPCDYTRTKIEYHGRSLLGVVQNAYNPLGP 474
            ++ +++++L+Y+S+ P L+ GSASF+RDYLRT+LM +++SA+  +       R +  +  + S E    +P+E+ K +F FL G DLA  R VCK+WN+F+ E+R W+ LC + W SL+TD   WR++D+ +   DP+ WR IYPK+   P+W CRLQKTG+FICNL AHQI G  +GD GLP  LVVERRF+++HL  F+L +A++LYFEP + EDR GF++FI+YL +R+RAGLALE  RRFIF+PPC Y++ K+ Y G SLLGVVQ  + PL P
Sbjct:    1 MMEELEKLLQYISAHPKLREGSASFMRDYLRTLLMVSSNSATTEL-----TRRMQDSSAPKASIEG---LPNELVKMIFSFLDGPDLANVRLVCKQWNEFSCEDRFWRELCIRLWPSLDTDKSTWRLIDEAVEATDPSKWRKIYPKVANRPRWKCRLQKTGKFICNLNAHQIRGPGLGDQGLPYTLVVERRFSLLHLNQFVLPEATMLYFEPVTPEDRPGFEQFIDYLVRRSRAGLALEGDRRFIFVPPCQYSQEKVNYDGHSLLGVVQILFPPLQP 269          
BLAST of Ggra5596.t1 vs. uniprot
Match: A0A5J4YZ77 (Flowering time control protein FPA n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZ77_PORPP)

HSP 1 Score: 323 bits (827), Expect = 3.350e-98
Identity = 155/280 (55.36%), Postives = 204/280 (72.86%), Query Frame = 0
Query:  193 DSVPALVHDVKRMLEYVSSKPSLQTGSASFLRDYLRTMLMQNAHSASEAIQAASKAHRAEVIAGRRKSREPFNKIPDEIAKHVFGFLGGRDLARAREVCKRWNDFASEERLWKRLCTQNWRSLETDHYLWRILDKEISPGDPNCWRNIYPKIEKTPKWTCRLQKTGRFICNLIAHQISGTPIGDVGLPNVLVVERRFNIVHLQTFILNDASVLYFEPESEEDRHGFDEFIEYLNKRTRAGLALEEQRRFIFIPPCDYTRTKIEYHGRSLLGVVQNAYNPL 472
            D+V  L+  +  +LEYVS KP+L  G ASFLRDYLRT+L+ +A      I    +   A++   RR +   FN +P E+ KH+  FL GR++ARAR+VC+ W + A +E +WK+LC + WRSL  D   W + +  +S  DPN WR IYP +     W CRLQKTGRFIC++IAHQ++G+ +G+ GLP+ LVVERRFNI+HLQTF+L DA+VLYFEPESE DR GF++FIEYL +RTRAGLAL+EQRRFIFIPPC+Y++  + Y G+SLLGVVQNA+ PL
Sbjct:  565 DTVWRLMSQLIGVLEYVSVKPTLIGGPASFLRDYLRTLLVGSASEGQREI-VRREIVSADLYPQRRANL--FNALPHELTKHILSFLDGRNMARARQVCQTWREIACDEEIWKQLCIKEWRSLAADPDAWPLANPLVSHEDPNRWRKIYPSLVTGKSWRCRLQKTGRFICHMIAHQVNGSSLGERGLPDTLVVERRFNILHLQTFVLPDAAVLYFEPESEADRSGFEDFIEYLTRRTRAGLALDEQRRFIFIPPCEYSKDTLNYRGKSLLGVVQNAFPPL 841          
BLAST of Ggra5596.t1 vs. uniprot
Match: A0A7S0ZCK1 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZCK1_9RHOD)

HSP 1 Score: 308 bits (789), Expect = 8.310e-98
Identity = 148/283 (52.30%), Postives = 200/283 (70.67%), Query Frame = 0
Query:  193 DSVPALVHDVKRMLEYVSSKPSLQTGSASFLRDYLRTMLMQNAHSASEAIQAASKAHRAEVIAG-RRKSREPFNKIPDEIAKHVFGFLGGRDLARAREVCKRWNDFASEERLWKRLCTQNWRSLETDHYLWRILDKEISPGDPNCWRNIYPKIEKTPKWTCRLQKTGRFICNLIAHQISGTPIGDVGLPNVLVVERRFNIVHLQTFILNDASVLYFEPESEEDRHGFDEFIEYLNKRTRAGLALEEQRRFIFIPPCDYTRTKIEYHGRSLLGVVQNAYNPLGP 474
            DSV   +  ++ +++Y +S+ +L+   AS+LRD LRT+L+ +   A E I ++  AH + +    +R S   F  +P  I +  F FL G DLARAR VC++W +FAS E LWKRLC + W +++TD  LW +++  +S  DP  WR +YP + K PKW CRLQKTGRFIC+++AHQI G P+G+ GLP  LVVERRFN+ HLQTF+L +ASVLYFEPE+ EDR G++EFIEYL +RTRAGLALE+QRRFIF+PPC Y+R  + Y G +LL VVQ +Y P  P
Sbjct:  101 DSVDRFIVQLRDIMDYATSRHALRKAGASYLRDSLRTLLVTSVADA-ERIHSSENAHTSGLTRKYQRTSNAMFALLPLSITQRAFRFLEGADLARARGVCRQWKEFASCESLWKRLCLEKWAAMDTDEALWDLVNSSVSTTDPEKWRKVYPAVAKRPKWRCRLQKTGRFICHVVAHQIGGAPLGERGLPYTLVVERRFNVAHLQTFVLPNASVLYFEPETPEDRPGYEEFIEYLLRRTRAGLALEDQRRFIFVPPCSYSR-HLSYDGAALLCVVQISYPPFAP 381          
The following BLAST results are available for this feature:
BLAST of Ggra5596.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IDC91.200e-20069.34F-box domain-containing protein n=1 Tax=Gracilario... [more]
S0F3M81.770e-15956.58F-box domain-containing protein n=1 Tax=Chondrus c... [more]
A0A2V3IDD93.560e-13161.41F-box domain-containing protein n=2 Tax=Gracilario... [more]
A0A2V3IY224.550e-10568.75F-box domain-containing protein n=1 Tax=Gracilario... [more]
A0A7S1XDB53.010e-10253.40Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S2ZYW34.000e-10151.77Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S1XH606.610e-10149.84Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A7S0G2G11.190e-9850.90Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YZ773.350e-9855.36Flowering time control protein FPA n=1 Tax=Porphyr... [more]
A0A7S0ZCK18.310e-9852.30Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainSMARTSM00256fbox_2coord: 267..307
e-value: 1.9E-7
score: 40.8
IPR001810F-box domainPFAMPF12937F-box-likecoord: 265..309
e-value: 1.7E-12
score: 47.0
IPR001810F-box domainPROSITEPS50181FBOXcoord: 261..307
score: 13.445135
NoneNo IPR availableGENE3D1.20.1280.50coord: 251..354
e-value: 1.0E-15
score: 59.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..109
IPR012921Spen paralogue and orthologue SPOC, C-terminalPFAMPF07744SPOCcoord: 350..450
e-value: 2.8E-7
score: 30.6
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 260..341

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:1066319..1067746 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5596.t1Ggra5596.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 1066319..1067746 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5596.t1 ID=Ggra5596.t1|Name=Ggra5596.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=476bp
MRLGNSSDHAHFPSRLHLDHPQQIHPLSHRSLPALRPPPSSTVASLPSRL
ASPPSPQRPAQPRAPISRKRPASLMFNFSKPAARPRSASDQQIQVLTDLD
NHHRPDHSQIPCPRDHQQQLQPRHLPLHQCTDVVHHSHDLRDDDDAASHL
FPFHEPMLGSPSTAAKRMRSCADSDTGSSSCRDFDEPEVVAPDSVPALVH
DVKRMLEYVSSKPSLQTGSASFLRDYLRTMLMQNAHSASEAIQAASKAHR
AEVIAGRRKSREPFNKIPDEIAKHVFGFLGGRDLARAREVCKRWNDFASE
ERLWKRLCTQNWRSLETDHYLWRILDKEISPGDPNCWRNIYPKIEKTPKW
TCRLQKTGRFICNLIAHQISGTPIGDVGLPNVLVVERRFNIVHLQTFILN
DASVLYFEPESEEDRHGFDEFIEYLNKRTRAGLALEEQRRFIFIPPCDYT
RTKIEYHGRSLLGVVQNAYNPLGPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
IPR012921SPOC_C
IPR036047F-box-like_dom_sf