Ggra5491.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5491.t1
Unique NameGgra5491.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length336
Homology
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BLAST of Ggra5491.t1 vs. uniprot
Match: A0A2V3J3P9 (SAP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3P9_9FLOR)

HSP 1 Score: 102 bits (253), Expect = 4.820e-21
Identity = 127/360 (35.28%), Postives = 179/360 (49.72%), Query Frame = 0 
Query:    1 MKLSKLRVAELRKHLKARGLDDKGNRPALIKRLREALENEQNAKTVEDKPVDPSN---QDDDEPTTIDENRAGSTSQKPAPE----DNDVAKGRPKTE----RTYKRKLQDRV-----EPEGRSPKRQYTANGNGGNGSSATQFVPKNSSPPRRQYRSKKVGEENAVHEKPQADRIPVQEQTSKAVERSEGVSSNAPEAGRNGVKNLDKDSTGAADASGQTKRRESPSK-DPEPAELKSAGSMQIADDASSAERIRRRKERFGIVIKEAAGGDPTDEXXXXXXXXXXGTL-----AVMNNSSKIPQSAQQERD----EAALRRRAEKFGLNVRERVPADATLSKDEVEKRLRRQKRFQSV 334
            MKLSK+RVA+LRK LK RGLDDKG RP+L+KRLR+A+EN++  K+ E++  + SN   + D +PT  +  R  S  +K        D +    R  TE    RTY+RK  DR      +      KR    N              +N+S  +RQ+R                       +T           SN PEA +N     + +S+          +   P K    P+++ +  ++Q   D  + ER+RRR ERFG V K       ++ XXXXXXXXXX        A  + ++K+ +SA+ E D    EAA RRRA KFGL  ++R  +DA LS DE+EKRL+RQ+RFQ+V
Sbjct:    1 MKLSKMRVADLRKELKRRGLDDKGTRPSLMKRLRDAMENDK--KSTEEQAQNASNASIKHDAQPTEPNSTREYSDDRKKQRPNRLTDTEDRSNREHTEKAQNRTYERKGDDRXXXXXXDEHFDDDKRVLEENSR------------RNASHVKRQHREXXXXXXXXXXXXXXXXXXXXXXETR----------SNEPEAKQNKTTGTENESSTPERGVKDLTQNGKPGKASHSPSKVNATCNIQNTRDTPTDERMRRRLERFGTVEKTETTDSLSEXXXXXXXXXXXXXXXXXXXAEESGANKMDKSAKSEADQHEVEAAKRRRALKFGLESKKRDFSDAGLSPDEIEKRLKRQRRFQNV 336
The following BLAST results are available for this feature:
BLAST of Ggra5491.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J3P94.820e-2135.28SAP domain-containing protein n=1 Tax=Gracilariops... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003034SAP domainSMARTSM00513sap_9coord: 3..37
e-value: 6.4E-9
score: 45.6
IPR003034SAP domainPFAMPF02037SAPcoord: 3..37
e-value: 8.6E-11
score: 41.4
IPR003034SAP domainPROSITEPS50800SAPcoord: 3..37
score: 11.963693
IPR036361SAP domain superfamilyGENE3D1.10.720.30SAP domaincoord: 1..51
e-value: 1.3E-11
score: 45.9
IPR036361SAP domain superfamilySUPERFAMILY68906SAP domaincoord: 2..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 140..159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..244
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..184
NoneNo IPR availablePANTHERPTHR46551SAP DOMAIN-CONTAINING RIBONUCLEOPROTEINcoord: 2..271
coord: 151..333

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:452715..453722 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5491.t1Ggra5491.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 452715..453722 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5491.t1 ID=Ggra5491.t1|Name=Ggra5491.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=336bp
MKLSKLRVAELRKHLKARGLDDKGNRPALIKRLREALENEQNAKTVEDKP
VDPSNQDDDEPTTIDENRAGSTSQKPAPEDNDVAKGRPKTERTYKRKLQD
RVEPEGRSPKRQYTANGNGGNGSSATQFVPKNSSPPRRQYRSKKVGEENA
VHEKPQADRIPVQEQTSKAVERSEGVSSNAPEAGRNGVKNLDKDSTGAAD
ASGQTKRRESPSKDPEPAELKSAGSMQIADDASSAERIRRRKERFGIVIK
EAAGGDPTDEEAVRKRRARFGTLAVMNNSSKIPQSAQQERDEAALRRRAE
KFGLNVRERVPADATLSKDEVEKRLRRQKRFQSVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003034SAP_dom
IPR036361SAP_dom_sf